FC877936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THET8 (Prolyl-tRNA synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=proS PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.821e-79 Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +E+ +TP+SQDF+ WYL+VI AELADYGPVRGT+V+RPYGYAIWE IQ L+ FKETGH N YFP FIP SF+ KEA HVEGFSPELA+VT GG+ELEE L Sbjct: 3 KEKGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPL 106 HSP 2 Score: 158.688 bits (400), Expect = 1.821e-79 Identity = 73/113 (64.60%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ +M+++WI S+RDLP L+NQW NV RWEMRT+PF+RT EFLWQEGHTAHAT EEAE+E +M+ IY + A E+ AIPVI G K++ E FAGA T TIEA+M D Sbjct: 108 VRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD 220
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_THET2 (Prolyl-tRNA synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=proS PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.821e-79 Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 2 Query: 248 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 +E+ +TP+SQDF+ WYL+VI AELADYGPVRGT+V+RPYGYAIWE IQ L+ FKETGH N YFP FIP SF+ KEA HVEGFSPELA+VT GG+ELEE L Sbjct: 3 KEKGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPL 106 HSP 2 Score: 158.688 bits (400), Expect = 1.821e-79 Identity = 73/113 (64.60%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSET++ +M+++WI S+RDLP L+NQW NV RWEMRT+PF+RT EFLWQEGHTAHAT EEAE+E +M+ IY + A E+ AIPVI G K++ E FAGA T TIEA+M D Sbjct: 108 VRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD 220
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLP8 (Prolyl-tRNA synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=proS PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.408e-75 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHA PEEA++E ++MI++Y FA E+ A+PVI G+KS+ E FAGA TY IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHADPEEAQEEVIRMINVYRTFAEEYMAMPVIVGKKSESEKFAGADATYCIEAMMQD 218 HSP 2 Score: 139.428 bits (350), Expect = 4.408e-75 Identity = 65/100 (65.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R QD++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSRQQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKETGHVNAYFPMFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLTE (Prolyl-tRNA synthetase OS=Chlorobium tepidum GN=proS PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.749e-75 Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEEA++E ++MI+IY FA E+ A+PVI G+KS+ E FAGA TY IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEEAQEEVIRMINIYRTFAEEYMAMPVIVGKKSESEKFAGADATYCIEAMMQD 218 HSP 2 Score: 137.117 bits (344), Expect = 5.749e-75 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R +D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FK+TGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSRQEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKQTGHVNAYFPMFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PELLD (Prolyl-tRNA synthetase OS=Pelodictyon luteolum (strain DSM 273) GN=proS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.749e-75 Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E M+MI++Y FA E+ A+PVI GRK+ E FAGA TY IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVMRMINVYRTFAEEYMAMPVIMGRKTDSEKFAGAEETYCIEAMMQD 218 HSP 2 Score: 137.887 bits (346), Expect = 5.749e-75 Identity = 64/100 (64.00%), Postives = 79/100 (79.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R++D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITARNEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLL2 (Prolyl-tRNA synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=proS PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.498e-75 Identity = 76/113 (67.26%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA +E ++MI IY KFA E+ A+PVI GRK++ E FAGA T+ IEAMM D Sbjct: 106 VRPTSETIIWASYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATKEEASEEVLRMITIYKKFAEEYMALPVIMGRKTESEKFAGADETFCIEAMMQD 218 HSP 2 Score: 140.198 bits (352), Expect = 7.498e-75 Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT RSQD++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N YFP FIP S+I KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSRSQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDAMFKETGHVNAYFPLFIPESYIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLPB (Prolyl-tRNA synthetase OS=Chlorobium phaeobacteroides (strain BS1) GN=proS PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.663e-74 Identity = 75/114 (65.79%), Postives = 92/114 (80.70%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDK 914 VRPTSET++ + +WI SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEEA+ E ++MI++Y FA E+ A+PV+ GRK+ E FAGA T+ IEAMM DK Sbjct: 106 VRPTSETVIWASYKKWIQSYRDLPLLINQWANVVRWEMRTRLFLRTSEFLWQEGHTAHATPEEAQDEVLRMINVYKTFAEEYMAMPVLIGRKTDSEKFAGADETWCIEAMMQDK 219 HSP 2 Score: 138.272 bits (347), Expect = 1.663e-74 Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 ITPR +D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FK TGH N YFP FIP S+I+KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITPREEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKATGHVNAYFPLFIPESYIQKEADHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_PROVI (Prolyl-tRNA synthetase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=proS PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.829e-74 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E M+MI +Y FA E+ A+PVI GRK+ E FAGA TY IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVMRMIRVYKTFAEEYMAMPVIMGRKTDSEKFAGADETYCIEAMMQD 218 HSP 2 Score: 135.961 bits (341), Expect = 2.829e-74 Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R D++ WY+D++ +A+LADY VRG MVIRP GYA+WE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSREADYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAVWEKMQAALDRMFKETGHVNAYFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLCH (Prolyl-tRNA synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=proS PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.392e-73 Identity = 75/113 (66.37%), Postives = 91/113 (80.53%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA++E ++MI++Y FA E+ A+PVI G+KS E FAGA T+ IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATHEEAQEEVLRMINVYKTFAEEYMALPVILGKKSDSEKFAGALETFCIEAMMQD 218 HSP 2 Score: 137.887 bits (346), Expect = 1.392e-73 Identity = 64/100 (64.00%), Postives = 79/100 (79.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT RS+D++ WY+D++ +A+LADY V+G MVIRP GYAIWE +Q L+ FKETGH N YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL Sbjct: 5 ITSRSEDYSQWYIDLVRSAKLADYADVKGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGQELAEKL 104
BLAST of FC877936 vs. ExPASy Swiss-Prot
Match: SYP_CHLT3 (Prolyl-tRNA synthetase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=proS PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.392e-73 Identity = 73/113 (64.60%), Postives = 90/113 (79.65%), Query Frame = 3 Query: 573 VRPTSETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGD 911 VRPTSETI+ + +WI SYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EA++E ++MI++Y FA E+ AIPVI G K++ E FAGA T+ IEAMM D Sbjct: 106 VRPTSETIIWSSYKKWIQSYRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATETEAKEEVLRMIEVYRHFAEEYMAIPVIVGMKTESEKFAGAHETFCIEAMMQD 218 HSP 2 Score: 140.584 bits (353), Expect = 1.392e-73 Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 2 Query: 260 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKL 559 IT R+QD++ WY+D++ A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N YFP FIP SFI+KEA H+EGF+PE A+VT GGG+EL+EKL Sbjct: 5 ITSRAQDYSQWYIDIVRFAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFPLFIPESFIQKEAEHIEGFAPECAVVTHGGGEELQEKL 104 The following BLAST results are available for this feature:
BLAST of FC877936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 162
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877936 ID=FC877936; Name=FC877936; organism=Citrus clementina; type=EST; length=914bpback to top |