FC877959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 5.381e-62 Identity = 137/223 (61.43%), Postives = 150/223 (67.26%), Query Frame = 2 Query: 278 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTA---PGAAQSRLKSNSGESDADSD-----RF---------XXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGR-RVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 MLTCIARSK+ GD+S QP+ + KSLTSQLKDMALKASGAYRHC+PCTA G Q +K+N S SD RF WGKEMEARLKGI SSGEATP KS SGR RVDP+VF+EE EPKEWVAQVEPGVLITFVSLP GGNDLKRIRFSRDMFNK QAQRWWA+NYD+VMELYNVQ+ +R Sbjct: 1 MLTCIARSKRAGDESSGQPDDPD---------SKNAKSLTSQLKDMALKASGAYRHCTPCTAAQGQGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVWGKEMEARLKGI--SSGEATP-KSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSR 211
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.000e-49 Identity = 108/209 (51.67%), Postives = 134/209 (64.11%), Query Frame = 2 Query: 278 MLTCIARSKQ----PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 MLTCIA +KQ G + + + + IKSLTSQ+KDMA+KASGAY+ C PC+ G++ + +SD S+ GKEME+RLKG S GE TP +S+SGR V EE+E KEWVAQVEPGVLITFVSLP GGND+KRIRFSR+MF+KWQAQ+WWAEN+D+VMELYNVQ+FN+ Sbjct: 1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKSCKPCS--GSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLS--GEGTP-ESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQ 204
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.287e-47 Identity = 113/233 (48.50%), Postives = 137/233 (58.80%), Query Frame = 2 Query: 278 MLTCIARSKQ--PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRF--------------------------SRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 MLTCIA +KQ + ++ E +QAIKSLTSQLKDMA+KASGAY++C PC+ G N +SDA SD WG EME+RLKGISS G T S+SGR + +VF+E++E KEWVAQVEPGVLITFVSLP+GGNDLKRIRF R+MFNKWQAQ+WW EN+++VMELYNVQ FN+ Sbjct: 1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCS--GTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATSTPKIWGNEMESRLKGISSEEGTPT---SMSGR-TESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRFPYYRDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYNVQ-FNQ 226
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.631e-44 Identity = 104/220 (47.27%), Postives = 125/220 (56.82%), Query Frame = 2 Query: 278 MLTCIARSKQ----------PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPC-----TAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 MLTCIA SKQ DD+ +QAIK+LT+Q+KDMALKASGAYRHC PC ++P A R +D+ SDRF + AR ++ E + G D E++E KEWVAQVEPGVLITF+SLP GGNDLKRIRFSR++FNKWQAQRWWAENY++VMELYNVQRFN+ Sbjct: 1 MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKASGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAGSGGDATP------SVSARTDFLAGDEEEEEEEEEEEGTTADGS---EDDEAKEWVAQVEPGVLITFLSLPEGGNDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQ 211
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.901e-39 Identity = 94/214 (43.93%), Postives = 121/214 (56.54%), Query Frame = 2 Query: 278 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXW---------GKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 M +CIA +K G + + ++A+KSLT Q+KDMALK SGAY+ C PCT G++ S LK S D D W +E++ I + E S+S + D V ++++ PKEW+AQVEPGV ITF SLP GGNDLKRIRFSR+MF+KWQAQRWW ENYD+++ELYNVQRFNR Sbjct: 1 MFSCIACTKADGGEEVEH----GARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPCT--GSSSSPLKKGH-RSFPDYDNASEGVPYPFMGGSAGSTPAWDFTNSSHHPAGRLESKFTSIYGNDRE-----SISAQSCD--VVLDDDGPKEWMAQVEPGVHITFASLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFNR 200
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35 Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 2 Query: 278 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 M TCI +K D + E ++A+KSLT+Q+KDMA K SG+++ P PG++ S L+ + D S+ ++ +S +S+S + D V +E++EPKEW+AQVEPGV ITFVSLP GGNDLKRIRFSR++F+KWQAQRWW ENYDR++ELYNVQRFNR Sbjct: 1 MFTCINCTKMA--DRGEEDEEDEARGSTTPNTKEAVKSLTTQIKDMASKFSGSHKQSKP--TPGSSSSNLRKFP-DFDTASESVPYPYPGGSTSSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCD--VVLEDDEPKEWMAQVEPGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNR 198
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL2_ORYSJ (Protein Brevis radix-like 2 OS=Oryza sativa subsp. japonica GN=BRXL2 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.843e-29 Identity = 91/232 (39.22%), Postives = 112/232 (48.28%), Query Frame = 2 Query: 278 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHC-----SPC--TAPGAAQSRLKSNSG-------ESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSS---SGEATPIKSVSGRRVDP---------VVFIEENEPKEWVAQVEPGVLITFVSLPRG-GNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 ML CIA S + G + + KSLTSQLKDM LK SG+ RH SP T+ SRL + G SD + + W + + S A+ + S+ D V+ E+ P+EW AQVEPGV ITFVS+P G GNDLKRIRFSR+MFNKW+AQRWW ENYDRV+ELYNVQ F+R Sbjct: 1 MLACIACSTKDGGEG---------GHRSATATPNSGKSLTSQLKDMVLKFSGSGRHQYKSGGSPSLRTSRFHRSSRLAAYPGIIDESGFTSDGAGEAYTYMRTTTASAGARAAPSTWDLPPKVNHRSFQPRVIRSPSASGVPSIGEEDYDDDDDDDDEETVLLEEDRVPREWTAQVEPGVQITFVSIPGGAGNDLKRIRFSREMFNKWEAQRWWGENYDRVVELYNVQTFSR 223
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL4_ORYSJ (Protein Brevis radix-like 4 OS=Oryza sativa subsp. japonica GN=BRXL4 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.922e-24 Identity = 71/165 (43.03%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 401 QLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEATPIKSVSGRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGG-NDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNR 892 QLKDM +K SG RH G+ R ++ S S + G G S SS +TP + E E +EWVAQVEPGV ITFVSL GG NDLKRIRFSR+M++KWQAQ+WW EN +R+MELYNV+RF+R Sbjct: 3 QLKDMVMKLSGTSRHHGQQRRGGSPPPRGRTTSVYR---SGYYRPGMVQDDMAVPPATYLGGG--------GTSMSSASSTPAWDFARPA--------EGEAREWVAQVEPGVQITFVSLAGGGGNDLKRIRFSREMYDKWQAQKWWGENNERIMELYNVRRFSR 148
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL3_ORYSJ (Putative protein Brevis radix-like 3 OS=Oryza sativa subsp. japonica GN=BRXL3 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21 Identity = 73/219 (33.33%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 278 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGA--YRHCSPCTA--------------PGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISSSSGEA----TPIKSVSGRR-VDPVVFIEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELY 871 ML CIA S + G + S+ + A+KSLTSQLKDM LK SG+ ++H TA PG + ++ + W +G +G + T I+S+ D V +E+ P+EW AQVEPGV ITFV+LP GGNDLKRIRFSR+ F + +A+ WW N DR+ Y Sbjct: 1 MLACIACSSKEGGEDGSRGAATPHG-------RDAVKSLTSQLKDMVLKFSGSNKHQHYKAATAGSPSFRSRSYRRPYPGFIDDSAFMTTTRPGGEAYMYTRAAPPPPVRAASTSMATWDMTRSKSNRGWQQDAGRSPGGTTWIQSIEEEAGADDVTVVEDAVPREWTAQVEPGVQITFVTLPGGGNDLKRIRFSRERFGEDRAKVWWEHNRDRIQAQY 212
BLAST of FC877959 vs. ExPASy Swiss-Prot
Match: BRXL5_ORYSJ (Putative protein Brevis radix-like 5 OS=Oryza sativa subsp. japonica GN=BRXL5 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 707 KEWVAQVEPGVLITFVSLPRG-GNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELY 871 +EWVA+ EPGVL+T G N L+RIRF ++F+ W AQ WWA+N+DR+ ELY Sbjct: 109 REWVAEPEPGVLLTLAPRADGVSNRLRRIRFREEVFDAWAAQCWWADNHDRIAELY 164 The following BLAST results are available for this feature:
BLAST of FC877959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877959 ID=FC877959; Name=FC877959; organism=Citrus clementina; type=EST; length=892bpback to top |