FC877974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.613e-92 Identity = 168/271 (61.99%), Postives = 214/271 (78.97%), Query Frame = 1 Query: 22 DEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVNIEALFKKYG-NVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYV-QQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 + I +YDV+VLGTG+TEC+LSG+LSV G KVLHID+ DHYGGEAASV + L++K+ N EE K+G+ DWN+DL+PK LM+NGELTNIL+ TDVTRY++FKQ++GSYV +QGK + KVP++ EA+ S LMG+FEKRR KKFLEW+ +KEDD ++HQGL++ TM EVY KF L ++T++FIGH+MAL+ +D Y+ QP A + RI LY S+ARYGKSPY+YP+YGLGELPQGFARLSAIYGGTYML+T IDEVL Sbjct: 4 ETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGK-----IYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQP--ARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVL 267
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 5.449e-90 Identity = 166/270 (61.48%), Postives = 210/270 (77.78%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVNIEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTECVLSG+LSV G KVLHIDRND+YG ++AS+N+ L+ + +PGE+ + GR DW +DLVPK LM+NG+LTNIL+ TDVTRY+EFKQIAGSYV + +AKVP + EAL+S LM +FEKRRAKKFLEWV ++EDD ++++ +NI +M+ V+ KF L+ T+DFIGH+MALY D Y+ +P A ET RI LY +S+A++GKSPYIYPLYGLGELPQGFARLSAIYGGTYMLN +DE++ Sbjct: 1 MDE---EYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALF---RPGEQRPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRD----GRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDDAYLKKP--ARETRERILLYASSIAKFGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNQPVDEIV 258
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 309.686 bits (792), Expect = 1.300e-83 Identity = 155/271 (57.20%), Postives = 206/271 (76.01%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ N +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.698e-83 Identity = 155/271 (57.20%), Postives = 206/271 (76.01%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ N +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_PONAB (Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.896e-83 Identity = 155/265 (58.49%), Postives = 199/265 (75.09%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE+AS+ +E L+K+Y PG P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E D + +G++ TM++VY KF L + DF GH++ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKI--PGSPP-ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQP--CYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.452e-83 Identity = 154/271 (56.83%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.452e-83 Identity = 154/271 (56.83%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 6.452e-83 Identity = 154/271 (56.83%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ +M++VY KF L + DF GH++ALY +D Y++QP +ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 8.426e-83 Identity = 154/265 (58.11%), Postives = 199/265 (75.09%), Query Frame = 1 Query: 37 EYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE+AS+ +E L+K++ PG P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK GS+V +G + KVPS EAL SSLMG+FEKRR +KFL +V F E D + +G++ TM++VY KF L + DF GH++ALY +D Y++QP ETINRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN I+E++ Sbjct: 4 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKI--PGSPP-ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKG----GKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQP--CYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEII 259
BLAST of FC877974 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 8.426e-83 Identity = 153/271 (56.46%), Postives = 205/271 (75.65%), Query Frame = 1 Query: 19 MDEIAPEYDVVVLGTGLTECVLSGVLSVKGNKVLHIDRNDHYGGEAASVN-IEALFKKYGNVQPGEEPWKKYGRVNDWNIDLVPKLLMSNGELTNILVSTDVTRYLEFKQIAGSYVQQGKGPKATVAKVPSDAGEALRSSLMGMFEKRRAKKFLEWVGEFKEDDSASHQGLNIHNCTMKEVYDKFSLEDNTRDFIGHSMALYPSDGYINQPGAAVETINRIRLYVNSMARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNTDIDEVL 828 MDE EYDV+VLGTGLTEC+LSG++SV G KVLH+DRN +YGGE++S+ +E L+K++ Q E P + GR DWN+DL+PK LM+NG+L +L+ T+VTRYL+FK + GS+V +G + KVPS EAL S+LMGMFEKRR +KFL +V F E+D + +G++ +M++VY KF L + DF GH++ALY +D Y++QP +ET+NRI+LY S+ARYGKSPY+YPLYGLGELPQGFARLSAIYGGTYMLN +D+++ Sbjct: 1 MDE---EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRF---QLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG----GKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQP--CLETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDII 259 The following BLAST results are available for this feature:
BLAST of FC877974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877974 ID=FC877974; Name=FC877974; organism=Citrus clementina; type=EST; length=829bpback to top |