FC877982

Overview
NameFC877982
Unique NameFC877982
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC877982 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.537e-15
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 3 
Query:  201 ISEKVEQSIKSAEEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYED 410
            +++KV+ ++K AE+AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR YED
Sbjct:    8 LNKKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of FC877982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE2.537e-1552.70Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA85CC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA85CC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877982 ID=FC877982; Name=FC877982; organism=Citrus clementina; type=EST; length=701bp
AAGAAGAGCAAGAGGCGAGAATGGCAACAATAGCCGGTGTCAATCTCTCA
ACTCCCAGCGTCTTTGCCAAAATCACAGACCCGAAGTCAAAGGTTCAACC
CAGCAGGTCTCTGTGGCTCAACAACCCATCAAGGAAAAGGCCCGCTCAGT
TTAGAACAGGGCGCATGCACATGCAACCCCTGAGAGCTGCTCCCGATAGA
ATCTCAGAGAAGGTGGAGCAAAGCATCAAGAGTGCAGAGGAGGCGTGCGA
GGGGGACCCTGCTAGTGGCGAGTGTGCTGCTGCATGGGACGAGGTGGAGG
AGCTGAGTGCCGCGGCCAGCCATGCTAGAGAGAGGAAGAAGGATTCCGAT
CCTTTGGAGGCTTACTGTAAGGACAACCCAGAGACCGATGAGTGCCGCAC
TTATGAAGATTGATAACATCGTCGTTATGCTCTTTTAATTATGTTTTTTT
TTTCTCCTTTTTAAGTCCTTGGATGTTGTTATGTGATGGGATCGTGATGT
TTTGGTCACCTTGATATTCATATACTACAATACCATATGGAGACTTGAAT
GATAAATAGTTCCTCTGATTTTTAGCGGTTATGTTTCAATCGCATCTTTT
ATGTTATGTTTGTAGTAACTTGTTTATATGATGATGAAACATTTATAAAT
TTTAATCTTATGCTCCCCCTTTATGAGAAAAAAAAAAAAAAAAAAAAAAA
A
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