FC877997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.589e-114 Identity = 203/240 (84.58%), Postives = 215/240 (89.58%), Query Frame = 2 Query: 35 MPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 MP IPEEPL +PDRF +FPI YP+IWEMY+KA ASFWTAEEV LS D WE+LT E+HFITHVLA FA SDGIVLENLA RFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLE+YIK+SDEKSRLFRA ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERV GIV +AVEIEREFV Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 2.805e-111 Identity = 196/241 (81.33%), Postives = 215/241 (89.21%), Query Frame = 2 Query: 35 MPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWE-SLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 MPS+PEEPL TP PDRF +FPI YP+IWEMY+KAEASFWTAEEV LSQD WE SL E+HFI HVLA FA SDGIVLENLA+RFM +VQVSEARAFYGFQIAIENIHSEMYSLLL+TYIK++ E+ LFRA ET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSEERV IV +AVEIEREFV Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFV 241
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2B_ARATH (Putative ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1) HSP 1 Score: 394.43 bits (1012), Expect = 3.429e-109 Identity = 188/241 (78.01%), Postives = 214/241 (88.80%), Query Frame = 2 Query: 35 MPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWE-SLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 MPS+PEEP+ TP PDRF +FPI YP+IWEMY+KAEASFWTAEEV LSQD WE SLT E+HFI HVLA FA SDGIVLENL+ RFM +VQ+SEARAFYGFQIAIENIHSEMYSLLL+TYIK++ E+ LFRA ET+PCV KKA+WA+ WI+GS++FAER++AFACVEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL E+R+ IV +AVEIEREFV Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREFV 241
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2) HSP 1 Score: 364.385 bits (934), Expect = 3.800e-100 Identity = 178/235 (75.74%), Postives = 198/235 (84.26%), Query Frame = 2 Query: 50 EEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EEPL RF +FPI Y IWEMY+KAEASFWTAEEV LS D+ QWE+LT EKHFI+H+LA FA SDGIVLENLAARF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IK+S EK RLF A ET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V IV EAVEIE EFV Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFV 252
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_MESAU (Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus auratus GN=RRM2 PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 5.315e-94 Identity = 167/245 (68.16%), Postives = 199/245 (81.22%), Query Frame = 2 Query: 23 KITKMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 K++ PS+ +EPL NP RF +FPI Y +IW+MY+KAEASFWTAEEV LS+D+ WE+L E+HFI+HVLA FA SDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV I+ AV IE+EF+ Sbjct: 61 KVSTNPSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.184e-93 Identity = 169/248 (68.15%), Postives = 198/248 (79.84%), Query Frame = 2 Query: 14 LTLKITKMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 L K PSI EEPL NP RF +FPI Y +IW+MY+KAEASFWTAEEV LS+D+ WE+L E+HFI+HVLA FA SDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SE+RV I+ +V IE+EF+ Sbjct: 58 LESKAPTKPSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_DANRE (Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio GN=rrm2 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.638e-93 Identity = 168/242 (69.42%), Postives = 197/242 (81.40%), Query Frame = 2 Query: 32 KMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 K ++ EEPL NP RF +FPI Y +IW+MY+KAEASFWTAEEV LS+DL W+SL E++FI+HVLA FA SDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+S E+ LF A ET+PCV KKADWALNWI D + + ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L NK SEE V I+ AVEIE+EF+ Sbjct: 60 KKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFL 301
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus GN=Rrm2 PE=1 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.710e-92 Identity = 166/248 (66.94%), Postives = 197/248 (79.44%), Query Frame = 2 Query: 14 LTLKITKMPSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 L K PS+ +EPL NP RF +FPI Y +IW+MY+KAEASFWTAEEV LS+D+ WE+L E+HFI+HVLA FA SDGIV ENL RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K +E+RV I+ AV IE+EF+ Sbjct: 58 LESKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_SPISO (Ribonucleoside-diphosphate reductase small chain OS=Spisula solidissima PE=2 SV=2) HSP 1 Score: 337.421 bits (864), Expect = 4.975e-92 Identity = 164/235 (69.79%), Postives = 194/235 (82.55%), Query Frame = 2 Query: 53 EPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 EPL NP RF + PI Y +IW+MY+KAEASFWTAEEV LS+D+ WESL EKHFI+HVLA FA SDGIV ENL RF KEVQV+EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV +KADWA+ WI D S ++AER++AFA VEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDFACL++S L NK S+ER+ I+ EAV+IE+ F+ Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFL 296
BLAST of FC877997 vs. ExPASy Swiss-Prot
Match: RIR2_HUMAN (Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 4.975e-92 Identity = 164/240 (68.33%), Postives = 194/240 (80.83%), Query Frame = 2 Query: 38 PSIPEEPLPTPNPDRFRLFPIPYPEIWEMYQKAEASFWTAEEVHLSQDLPQWESLTAHEKHFITHVLALFAPSDGIVLENLAARFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKNSDEKSRLFRAFETVPCVAKKADWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVMGIVKEAVEIEREFV 754 P + +EPL NP RF +FPI Y +IW+MY+KAEASFWTAEEV LS+D+ WESL E++FI+HVLA FA SDGIV ENL RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYIK+ E+ LF A ET+PCV KKADWAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEERV I+ AV IE+EF+ Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304 The following BLAST results are available for this feature:
BLAST of FC877997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877997 ID=FC877997; Name=FC877997; organism=Citrus clementina; type=EST; length=755bpback to top |