FC877998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.724e-47 Identity = 125/262 (47.71%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 79 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGFQPGMGRPEPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSGYGRKPDSEVHGSGYGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKPGY-ESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGS 828 IT+ YGRP+PPSDETCYP SS D DF+Y RP+F+ EPSAY DEALN EYSSY+RPK YG + G GR +PESEY SG Y +RP+ Q YGSGYG R E+E EYGSG G + + E YGRRPESG SG+GGR+ESEY +YGR E E GY +KP Y + GY + YG E E GY RKP Y S+ E E GY RKP Y G + ++GS Sbjct: 28 ITVIYGRPIPPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGR-------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-RKPSYGR---SEEEQEEGY-RKPSY--GRSEEQEEGS 267 HSP 2 Score: 75.8702 bits (185), Expect = 3.361e-13 Identity = 65/159 (40.88%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 436 SGYGKRPESEEYGSGYGR-------KPDSEVHGSGYGRRPESG---ESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPE--YESGYG----SKHDDGSGYG-SKPHESGY 861 S YG + EY S Y R +PDS G G RP G ESG+G + ESEYG S YG + E E YG++PE Y SGYG + E ES YG SG G + E E YGR+PE SGYG S+++ YG S+ E GY Sbjct: 68 SAYGDEALNTEYSS-YSRPKPRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPESEYG-SGYGGQTEVE--YGRRPEQS--------YGSGYGGRTETESEYG------SGGGGRTEVE--YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY 206
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: IF2_CLOPH (Translation initiation factor IF-2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17 Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 364 YGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGG-KPGYESGYGS-KPEFESGYGRKPEYESGYGS-KPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHESG 858 YG RP+ + Y RP Q YG RP+ + GS R+P + YG R G+ +G R + + GS R+P+ + YG +P+ + YG +PG + YG +P+ + YG +P+ + +G +P+ + GYG +P+ + YG + GY + G Sbjct: 288 YGDRRPQGQ--GSYGDRPQGQ---GSYGDRPQGQ--GSYGDRRPQGQ---GSYGDRRPQGQGSYGDRPQGQ--GSYGDRRPQGQGSYGDRPQGQGNYGDRRPGGQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQG 443 HSP 2 Score: 87.8113 bits (216), Expect = 8.547e-17 Identity = 57/190 (30.00%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 364 YGSGRPESEYASGYAKRPDSQEYGSGYGKRPESE-EYGS---GYGRKPDSEVHGSG-YGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGK-PGYESGYGSK-PEFESGYG-----------RKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYG------SKPHESGY 861 YG RP+ + + G +RP Q YG RP+ + YG G G D G G YG R G+ +G R + + GS R+P+ + YG +P+ + YG + PG + YG + P+ + YG R+P+ + GYG +P+ + YG +P+ + GY + +G K +SGY Sbjct: 277 YGDRRPQGQGSYG-DRRPQGQ---GSYGDRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQ--GSYGDRRPQGQGSYGDRPQGQGNYGDRRPGGQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFGGFNKDFDKDKDSGY 460 HSP 3 Score: 85.1149 bits (209), Expect = 5.540e-16 Identity = 54/174 (31.03%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSG-YG-RRPESGESGFG----GRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSK-PEFESGYG-RKPEYESGYGSKPEFESGYG-RKPEYESGYGSKHDDGSGYGSK 843 G PY RP+ + G +RP Q G +RP + + G G D G G YG RRP SG+ G G + GS R+P+ + YG +P+ + YG +P + YG + P+ + YG R+P+ + YG +P+ + YG R+P+ + YG + YG + Sbjct: 206 GDRRPYNGDRPQGQGNYG-DRRPQGQNSGD---RRPYNGDRPQGQGNYGDRRPQGQGSYGDRRPNSGDRPQGQGNYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRPQGQGNYGDR 375 HSP 4 Score: 72.0182 bits (175), Expect = 4.853e-12 Identity = 49/167 (29.34%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 325 AYGFQP-GMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESE-EYGS-------GYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYG-QKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGS-----KPEFESGYGR 780 +YG +P G G YG RP+ + + G +RP Q YG RP+ + YG YG +P + YG R G+ +G R G +YG +P+ + +G ++P+ + GYGG+P + YG +P+ + GY + + + +G + +SGY R Sbjct: 308 SYGDRPQGQGS---YGDRRPQGQGSYG-DRRPQGQ---GSYGDRPQGQGSYGDRRPQGQGSYGDRPQGQ---GNYGDRRPGGQGSYGDRRPQ--GQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFGGFNKDFDKDKDSGYTR 462 HSP 5 Score: 69.707 bits (169), Expect = 2.409e-11 Identity = 52/192 (27.08%), Postives = 81/192 (42.19%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGY----AKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYG-RRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSK-PEFESGYG-RKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSG------------YGSKPHESG-YG 864 G PY RP+ + + RP Q G +RP + + G G D G G RRP +G+ G + YG R+P+ + YG + G +P + YG + P+ + YG R+P+ + YG +P+ + YG +P+ + YG + G G YG +P G YG Sbjct: 174 GDRRPYNGDRPQGQNSGDRRPYNGDRPQGQNSGD---RRPYNGDRPQGQGNYGDRRPQGQNSGDRRPYNGDRPQG---QGNYGD----RRPQGQGSYGDR---RPNSGDRPQGQGNYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYG 352
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: FUS_BOVIN (RNA-binding protein FUS OS=Bos taurus GN=FUS PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12 Identity = 68/205 (33.17%), Postives = 93/205 (45.37%), Query Frame = 1 Query: 325 AYGFQPGMGRPE----PYGS----GRPESEYASGYAKRPDSQEYG----SGYGKRPESEEYGS--GYGRKPDSEV-HGS-----GYGRRPE-SGESG-FGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFE--SGYGRKPEYESGYGSKPEFESGYGR-KPEYESGYGSKHDDGSGYGSKPHESGYG 864 AY QPG G + PYG G +S SGY + S YG +GY + + Y S GYG S+ +G GYG++P SG SG +G ++S G G GYGQ +SGYGG+ + YG + + GYG++ +Y S G YG+ +P SG G G GYG++ GYG Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGYSTQSAPQGYSSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQPQG------GGYGQ----QSGYGGQ---QQSYGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQPSMSSGGG-----GGGYGNQDQSGGYG 202
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: KRA62_MOUSE (Keratin-associated protein 6-2 OS=Mus musculus GN=Krtap6-2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12 Identity = 69/146 (47.26%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 430 YGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG-GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHESGYG 864 YG GYG YGSGYG S +G GYG SG+G S YG GS G Y SGYG Y SGYG GY SGYG + SGYG Y SGYG + SGYG Y SGYG + GSGYGS + SGYG Sbjct: 12 YGCGYGSG-----YGSGYGCGSGSG-YGCGYG-------SGYGCGYGSGYGCGSGSGYGCGYGSGYGCG--YGSGYGC--GYGSGYGC--GYGSGYG--CGYGSGYGC--GYGSGYG--CGYGSGYGCGY--GSGYGS-GYGSGYG 129 HSP 2 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 78/175 (44.57%), Postives = 81/175 (46.29%), Query Frame = 1 Query: 364 YGSGRPESEYASGYAKRPDSQE---YGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG---GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHES--GYG 864 YGSG Y SGY S YGSGYG YGSGYG S +G GYG SG+G S YG GS YG Y SGYG Y SGYG GY SGYG + SGYG Y SGYG SGYG SGYGS G GYGS GYG Sbjct: 16 YGSG-----YGSGYGCGSGSGYGCGYGSGYGCG-----YGSGYGCGSGSG-YGCGYG-------SGYGCGYGSGYGCGYGSGYGCG--YGSGYGCG--YGSGYGC--GYGSGYGC--GYGSGYG--CGYGSGYG------SGYG------SGYGS--GCGCGYGSYYRSGCCGYG 148
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: HORN_HUMAN (Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12 Identity = 62/186 (33.33%), Postives = 81/186 (43.55%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG-GSAYGRKPEYE---SGYGQKPEYESGYGGKPGYES---GYGSKPEFESGYGRKPEYESGYGSKP-----EFESGYGRKPEYESGYGSKHDDGSGYGSK--PHESGYG 864 G+ YG S +ASG + +GSG G+ P + GSG G+ P HGSG GR SG G G S +G S+ G+ Y SG G YE +G + G S +GS S YG + G GS+ + SG G+ P G +H GSG S P+ SG G Sbjct: 862 GQSSSYGQHESASHHASGRGR------HGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQ-HGSRSGQSSRSEQHGSSSGSSSSYG-----QHGSGSRQSLGHGQHGSGSGQSPSPSRG---RHGSGSGQSSSYGPYRSGSG 1032 HSP 2 Score: 70.8626 bits (172), Expect = 1.081e-11 Identity = 56/174 (32.18%), Postives = 77/174 (44.25%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHESGYG 864 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E R +GS SG+GR+ S+ GSG G H S +G Sbjct: 1567 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLG---HSSSHG 1729 HSP 3 Score: 69.707 bits (169), Expect = 2.409e-11 Identity = 55/174 (31.61%), Postives = 77/174 (44.25%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKPHESGYG 864 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E + +GS SG+GR+ S+ GSG G H S +G Sbjct: 1097 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLG---HSSSHG 1259 HSP 4 Score: 69.707 bits (169), Expect = 2.409e-11 Identity = 56/176 (31.82%), Postives = 74/176 (42.05%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGSGYGSKP----HESGYG 864 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G +ES GQ Y S +G G+ SGYG R + S GS + +G SG+G + GSG G P H SG G Sbjct: 2507 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFG--------HHESSSGQSSSY-SQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHY-GQHGSGSRQSSGHGRQ---GSGSGQSPSRGRHGSGLG 2663 HSP 5 Score: 68.5514 bits (166), Expect = 5.366e-11 Identity = 57/179 (31.84%), Postives = 79/179 (44.13%), Query Frame = 1 Query: 349 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYG-----SKHDDGSGYGSKPHESGYG 864 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E +GS SG+GR+ SG G +H GSG+ S + G G Sbjct: 2037 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQ---GSGSGHSPSRGRHGSGSGHSSSHGQHGSG 2204
BLAST of FC877998 vs. ExPASy Swiss-Prot
Match: IF2_DESRM (Translation initiation factor IF-2 OS=Desulfotomaculum reducens (strain MI-1) GN=infB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11 Identity = 57/182 (31.32%), Postives = 79/182 (43.41%), Query Frame = 1 Query: 340 PGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSG----YGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESG--YGQKPEYESG--YGGKP--GYESGYGSKPEFESG--YGRKPE--YESGYGSKPEFESG--YGRKPEYESG--YGSKHDDGSG 831 P G + G GRP++ G RP G YG RP+ + G YG +P G YG RP+ G+ G G YG +P+ G YG +P+ G YG +P G YG +P+ G YG +P+ YG +P+ G YG +P+ G YG + G G Sbjct: 138 PRQGSAQQSGQGRPQANRPQGSQGRPYGGRPQGGQSRPYGDRPQGGQ-GRPYGDRPQGG-QGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQSRPYGDRPQGGQGRPYGDRPQGGQSRPYGDRPQGGQGRPYGDRPQGGQGRHYGDRPQGGQG 317 The following BLAST results are available for this feature:
BLAST of FC877998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877998 ID=FC877998; Name=FC877998; organism=Citrus clementina; type=EST; length=864bpback to top |