FC878020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: Y4967_ARATH (Uncharacterized oxidoreductase At4g09670 OS=Arabidopsis thaliana GN=At4g09670 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.876e-93 Identity = 165/246 (67.07%), Postives = 199/246 (80.89%), Query Frame = 1 Query: 58 MATESQAAIRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAGDAEFLKNDIRVKPXXXXXXXXXXXXWYGIRSILWANDYELPKTVIAMHGPVLNEAGVILSCGASLHWDDGRVATFSCSFL 795 MATE+Q IR G++G ADIARK+SRAI LAPNA +S VASRSLEKA FA ANN+P K++GSYE+LL+D +IDA+Y+PLPTS+HV+WA+ A+K KH+L+EKP+A+NV EFD I++ACE NGVQ+MDGTMWVHNPRTA +KEF+SD +RFGQL+T+ SCFSFAGD +FLKNDIRVKP WY IR+ L AN++ELPKTV A G VLNEAGVILSCGASL W+DGR AT CSFL Sbjct: 1 MATETQ--IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPRTALLKEFLSDSERFGQLKTVQSCFSFAGDEDFLKNDIRVKPGLDGLGALGDAGWYAIRATLLANNFELPKTVTAFPGAVLNEAGVILSCGASLSWEDGRTATIYCSFL 244
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: YMO1_RHIME (Uncharacterized oxidoreductase ORF334 OS=Rhizobium meliloti PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.749e-19 Identity = 58/171 (33.92%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 82 IRFGIIGAADIA-RKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFAG-DAEFLKNDIRV 588 +RFGIIG A IA K+ ++ A + A+ASR L++A A A F + YGSY+ +L D +I+AVY+PLP +HV WA+ A+ KH+L EKP+AL+V E +++ + G ++ + M +P+ ++ + V+ + G++R + F+ D + + ND + Sbjct: 4 VRFGIIGTAAIAVEKVIPSMLSAEGLEVVAIASRDLDRAR--AAATRFGI-GRSYGSYDEILADPEIEAVYIPLPNHLHVHWAIRAAEAGKHVLCEKPLALDVEELSRLIDCRDRTGRRIQEAVMIRAHPQWDEIFDIVASGE-IGEVRAIQGVFTEVNLDPKSIVNDASI 170
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: DHDH_DANRE (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Danio rerio GN=dhdh PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.565e-13 Identity = 48/160 (30.00%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 79 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSFA 552 A+R+GI A I+ + A+ P + AVA+R L A FA+ ++ P + YGSYE L +D +ID VY+ H++ + KK++L EKP+A+N+ E +++A + V LM+ P + ++ +S GQ++ + + F A Sbjct: 2 ALRWGICSAGKISHDFTVALRTLPAEQHQVVAVAARELAHAQEFAQKHSIP---RAYGSYEELAEDPEIDVVYVGTIHPHHLRVGLLFMNAKKNVLCEKPLAMNLKEVQQMISAARRSDVFLMEAVWTRFFPASLEISRLLSQ-NAVGQVKLVRADFGAA 157
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: DHDH_XENTR (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Xenopus tropicalis GN=dhdh PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 79 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 444 A ++GI A I+ A++ P + + A+A+R LEKA NFA+ +N P K YGSYE L D DID +Y+ +H + Q K++L EKP+A+N A+ ++ + V LM+ Sbjct: 2 ATKWGICSAGKISNDFVVALSTLPAVDHQVVAIAARDLEKAKNFAQNHNIP---KAYGSYEELAKDPDIDVIYVGAIHPVHRDVVLMCLQNGKNILCEKPLAMNAAQVQELIATARKFNVFLME 122
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: DHDH_XENLA (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Xenopus laevis GN=dhdh PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 79 AIRFGIIGAADIARKLSRAITLAP--NAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 444 A ++GI I+ A++ P + + AVA+R LEKA NFA+ +N P K YGSYE L D DID +Y+ +H + Q K++L EKP+A+N A+ ++ A + V LM+ Sbjct: 2 ATKWGICSTGRISNDFVVALSTLPAVDHQVVAVAARDLEKAKNFAQIHNIP---KAYGSYEELAKDPDIDVIYVGAIHPVHRDVVLMCLQNGKNVLCEKPLAMNSAQVRELIAAARKFNVFLME 122
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: YGJR_ECOLI (Uncharacterized oxidoreductase ygjR OS=Escherichia coli (strain K12) GN=ygjR PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 82 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMD 444 IRF +IG I R+ A + L+AV SRSLE+A +FA N+F + ++ S EA+ + IDAVY+ P S+H K +++ EKP+A N+AE D + EN V L + Sbjct: 2 IRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFA--NDFSVE-HLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFE 119
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: YULF_BACSU (Uncharacterized oxidoreductase yulF OS=Bacillus subtilis GN=yulF PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 1 Query: 82 IRFGIIGAADIARKLSRAITLAPNAVLSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKE 489 IRF IIG I + + + L+AV SRS E+A FA +N A + + + DAVY+ P ++H + AV KH+L EKP A N E + +++A + NGV LM+ P ++K+ Sbjct: 2 IRFAIIGTNWITDRFLESAADIEDFQLTAVYSRSAERAGEFAAKHNA---AHAFSDLQEMAASDCFDAVYIASPNALHKEQAVLFMNHGKHVLCEKPFASNTKETEEMISAAKANGVVLMEAMKTTFLPNFKELKK 134
BLAST of FC878020 vs. ExPASy Swiss-Prot
Match: DHDH_MOUSE (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase OS=Mus musculus GN=Dhdh PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 49/159 (30.82%), Postives = 74/159 (46.54%), Query Frame = 1 Query: 79 AIRFGIIGAADIARKLSRAITLAPNAV--LSAVASRSLEKATNFAKANNFPPDAKVYGSYEALLDDKDIDAVYLPLPTSMHVKWAVSVAQKKKHLLMEKPMALNVAEFDVILNACEENGVQLMDGTMWVHNPRTAQMKEFVSDPQRFGQLRTMHSCFSF 549 A+R+GI+ A IA + ++ P++ + AVA+R L +A FA+ N P K YGSYE L D +++ Y+ H + K +L EKPM +N AE ++ GV LM+ P ++E V G LR + F F Sbjct: 2 ALRWGIVSAGLIANDFTTVLSSLPSSEHQVVAVAARDLNRAEEFAQKFNIP---KAYGSYEELAKDPNVEVAYIATQHPQHKPAVLLCLAAGKAVLCEKPMGVNAAEVREMVAKARSQGVFLMEAIWSRFFPAMEALRE-VLVQGTIGDLRVARAEFGF 156 The following BLAST results are available for this feature:
BLAST of FC878020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878020 ID=FC878020; Name=FC878020; organism=Citrus clementina; type=EST; length=797bpback to top |