FC878023
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878023 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.324e-20 Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 3 Query: 462 DIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADL-SKCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGG 863 D P P+II+FHGG ++ SA + I+ + C + +++SV+YR APEHR P A+DD +++WV Q P++R D ++ FL G SSGG IA+H +RA D VK+ G +L FGG Sbjct: 106 DAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQ----PFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD------EGVKVCGNILLNAMFGG 230
BLAST of FC878023 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.403e-19 Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 3 Query: 327 DGSLTRH-NKF--PTVPPSASITDQLALSKDVPLNPQNKTFLRLFKPKDI---PPNTKL---------PLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGG 863 DG+ RH +F VP +A+ + + S DV ++ Q R+++P D P T L P+I++FHGG + SA++ I+ C +L A+++SV+YR APE+R P A+DD ++WV + WLR D + FL G SSGG I ++ +RA++ S + ++G +L P FGG Sbjct: 38 DGTFNRHLAEFLDRKVPANANPVNGV-FSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS----WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE------SRIDVLGNILLNPMFGG 221
BLAST of FC878023 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.470e-18 Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 441 LRLFKPKDIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGG 863 L L KP + +P++I+FHGG + SA++ I+ C +L +++SVDYR +PEHR P A+DD ++ WV+ + WL+ D + +L G SSGG IA++ +RA + VK++G +L P FGG Sbjct: 94 LELTKP--LSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV----WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN------EGVKVLGNILLHPMFGG 223
BLAST of FC878023 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16 Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 426 QNKTFLRLFKPKDIPPNTKLPLIIYFHGGGYILFSADAFIFHNSCCQLAAFIPALILSVDYRLAPEHRLPAAFDDAMESIQWVRDQALGDPWLRDYADLS-KCFLMGSSSGGGIAYHAGLRALDLDADHLSPVKIVGLVLNQPFFGG 863 Q + L L KP D +P+I++FHGG + SA++ I+ C +L +++SV+YR APE+ P A+DD ++ WV ++ WL+ D FL G SSGG IA++ LRA + S + ++G +L P FGG Sbjct: 90 QPPSILDLEKPVD---GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE------SGIDVLGNILLNPMFGG 223 The following BLAST results are available for this feature:
BLAST of FC878023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878023 ID=FC878023; Name=FC878023; organism=Citrus clementina; type=EST; length=866bpback to top |