FC878067
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXC_BOMMO (Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.486e-68 Identity = 121/232 (52.16%), Postives = 166/232 (71.55%), Query Frame = 1 Query: 148 CVIAEEPSSEVVWRWACQEGKCQKTLHDSKDTDPPLSLEACKMFCNEFGLLWPMPTGEVDLGSFLAKINLDKVRVTSQRQGLSSGLTDAATRIFMEKIRNVVPKGAKPKSTGKSLDIYLNNENPDINEISLEVSERYSLRV-XXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 C I +WRW C+ +C K ++ ++ +P LSLEACKMFC+++GLLWP PT E +LG+FL+KIN++ + + +QG S L AA F + + VPKG K+ GKS+ +YL NENP I E SL++ E Y L + VNA++ +SF G+R+GLETL+QL++YDDIR+ +L+VRDVTI+D+PVYPYRGILLDTARN++ +D IK+T+DAMA VKLNTFHWH Sbjct: 17 CGIPTAAEEHSLWRWTCENNRCTKIRNEPENKEPVLSLEACKMFCDDYGLLWPKPTIETNLGNFLSKINMNTIDIQITKQGKSDDLLTAAADRFKTLVSSSVPKGFSAKAAGKSVTVYLVNENPYIREFSLDMDESYELYISSTSSDKVNATIRGNSFFGVRNGLETLSQLIVYDDIRNNLLIVRDVTIKDRPVYPYRGILLDTARNFYSIDSIKRTIDAMAAVKLNTFHWH 248
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: FDL_DROME (Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.137e-18 Identity = 68/259 (26.25%), Postives = 116/259 (44.79%), Query Frame = 1 Query: 175 EVVWRWACQEGKCQKTLHDSKDTDPPLSLEACKMFCNEFGLLWPMPTGEVDLGSFLAKINLDKVRV---TSQRQ-------------------------GLSSGLTDAATRIFMEKIRNVVPK--------GAKPKSTGKSLDIYLNN-ENPDINEISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 E W + C+ +C + H K +S +C M C + + WP PT + L S +++ V++ T+ R+ G SS T + + ++ P G K S+ + ++ ++ D+N SL+ E Y L + + A+S+ G RHGL TL QL+ +DD + + ++D P + YRG++LDT+R++F V+ IK+T+ M K+N FHWH Sbjct: 58 EKSWTYKCENDRCMRVGHHGKSAKR-VSFISCSMTCGDVNI-WPHPTQKFLLSSQTHSFSVEDVQLHVDTAHREVRKQLQLAFDWFLKDLRLIQRLDYVGSSSEPTVSESSSKSRHHADLEPAATLFGATFGVKKAGDLTSVQVKISVLKSGDLN-FSLDNDETYQLSTQTEGHRLQVEIIANSYFGARHGLSTLQQLIWFDDEDHLLHTYANSKVKDAPKFRYRGLMLDTSRHFFSVESIKRTIVGMGLAKMNRFHWH 313
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXB_RAT (Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13 Identity = 66/195 (33.85%), Postives = 91/195 (46.67%), Query Frame = 1 Query: 289 FGL---LWPMPTGEVDLGSFLAKINLDKVRVTSQRQ---GLSSGLTDAATRIFMEKI-----RNVVPKGAKPKSTGKSLDIYLNNENPDINEISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 FGL LWPMP V + L I+ + ++ + G S L A R + I R+ P + K + L +++N E S+ E YSL V A L A+ G GLET +QL+ D + + TI D P +P+RGIL+DT+R+Y V I +TLDAMA K N HWH Sbjct: 28 FGLQPALWPMPRS-VQVFPRLLYISPENFQIDNSPNSTAGPSCSLLLEAFRRYYNYIFGFYKRHHGPAKFQDKPQLEKLLVFINLEPQCDAFPSMSSDESYSLLVQEPV----ALLKANEVWGALRGLETFSQLVYQDAYGT--FTINESTIADSPRFPHRGILIDTSRHYLPVKTIFKTLDAMAFNKFNVLHWH 215
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXA_CAEEL (Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12 Identity = 57/184 (30.98%), Postives = 89/184 (48.37%), Query Frame = 1 Query: 292 GLLWPMPTGEVDLGSFLAKINLDKVRVTSQRQGLSSGLTDAATRIFMEKIRNVVPKGAKPKSTGKSL-DIYLNNENPDINEISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 G +WP+P ++ GS I DK+ + + L A +M K P K T + + + +E P + SE Y LRV +NA + G +E+L+ L+ YD + Q +R V I DKP +P RGI++D++R++ V+VIK+ L+ M+ KLN HWH Sbjct: 32 GGVWPLPK-KIVYGSKNRTITYDKIGIDLGDKKDCDILLSMADN-YMNKWLFPFPVEMKTGGTEDFIITVTVKDECPSGPPVH-GASEEYLLRVSLTEAVINAQ----TVWGALRAMESLSHLVFYDH-KSQEYQIRTVEIFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMSMNKLNVLHWH 207
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXA1_DICDI (Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.218e-12 Identity = 46/156 (29.49%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 391 LSSGLTDAATRIFMEKIRNVV---PKGAKPKSTGK---SLDIYLNNENPDINEISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 + S + A + M++ N+ ++P S S+ IY ++E + L + E YSL + + L A + G GLET QL++Y+++ + +V V+I D P YP+RG ++D+AR+Y ++I +D++ K NT HWH Sbjct: 47 IESNIESATFSVSMDRYTNLFFPFSNESEPSSNESFLLSVTIYSDDET-----LQLGIDESYSLSIEQG----SYQLKATNIYGAMRGLETFKQLIVYNELENSYSIVC-VSISDSPRYPWRGFMVDSARHYIPKNMILHMIDSLGFSKFNTLHWH 192
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXB_MOUSE (Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 535 SLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 SL E YSL V A L A+S G GLET +QL+ D + + +I D P +P+RGIL+DT+R++ V I +TLDAMA K N HWH Sbjct: 121 SLSSDETYSLLVQEPV----AVLKANSVWGALRGLETFSQLVYQDSFGT--FTINESSIADSPRFPHRGILIDTSRHFLPVKTILKTLDAMAFNKFNVLHWH 216
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXB_FELCA (Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12 Identity = 60/191 (31.41%), Postives = 87/191 (45.55%), Query Frame = 1 Query: 298 LWPMPTGEVDLGSFLAKINLDKVRV---TSQRQGLSSGLTDAATRIFMEKIRNVVPKGAKPKSTGKSLD-------IYLNNENPDINEISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 LWPMP V L ++ D + S G + L A R + E I + +P +++ + L++E I+ + E Y+L V A L A+ G+ GLET +QL+ D V + I D P +P+RGIL+DTAR++ V I +TLDAMA K N HWH Sbjct: 30 LWPMPLS-VKTSPRLLHLSRDNFSIGYGPSSTAGPTCSLLQEAFRRYHEYIFGFDKRQRRPAKPNSAIELQQLLVTVVLDSECDLFPNITSD--ESYTLLVKEPV----AFLKANRVWGVLRGLETFSQLIYQDSYGT--FTVNESDIIDSPRFPHRGILIDTARHFLPVKSILKTLDAMAFNKFNVLHWH 211
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXA_CAEBR (Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.713e-12 Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 547 SERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 SE Y LRV +NA + G +ETL+ L+ YD + Q +R I DKP +P RGI++D++R++ ++VIK+ L+ M+ KLN HWH Sbjct: 112 SEEYLLRVSVSEAVINAQ----TVWGALRAMETLSHLVFYDQ-KSQEYQIRTAEIFDKPRFPVRGIMIDSSRHFLSLNVIKRQLEIMSMNKLNVLHWH 204
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEX1_CANAL (Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.044e-12 Identity = 35/104 (33.65%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 529 EISLEVSERYSLRVXXXXXXVNASLSADSFLGLRHGLETLAQLLLYDDIRDQILMVRDVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 ++ L V+E Y+L++ ++A+ + G HGL +L QL+++ D+ ++ VTI D P + +RG+++D+ RN+ VD I + +D MA K+N+ HWH Sbjct: 105 DLQLGVNESYTLKINTDGINIHAATT----WGALHGLVSLQQLIIHTS-EDKYVVPSSVTISDFPNFKHRGLMIDSGRNFLTVDSILEQIDIMALSKMNSLHWH 203
BLAST of FC878067 vs. ExPASy Swiss-Prot
Match: HEXB2_DICDI (Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11 Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 607 ADSFLGLRHGLETLAQLLLYDDIRDQILMVR-DVTIEDKPVYPYRGILLDTARNYFDVDVIKQTLDAMATVKLNTFHWH 840 A++ G GLETL Q++ +D R+ + I+D P YP+RG++LDT+R+++ VDV+K+ ++A+A K N FHWH Sbjct: 154 AETVYGAIRGLETLYQMIGFDYQREYYQIKHCPWIIQDSPRYPHRGVMLDTSRHFYSVDVLKEFIEALAYNKFNVFHWH 232 The following BLAST results are available for this feature:
BLAST of FC878067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878067 ID=FC878067; Name=FC878067; organism=Citrus clementina; type=EST; length=841bpback to top |