FC878078

Overview
NameFC878078
Unique NameFC878078
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7427 contig Ccv1_Contig7427:15..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.968e-36
Identity = 98/257 (38.13%), Postives = 134/257 (52.14%), Query Frame = 2
Query:   71 IFLACGWLGN--TGPPGQTWVGDVNSQYSPHEDASAPKSTIVTENK---QVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTDAR---PSALPVNQSI-HLTWIRNYSAP 814
            I L CG   +  T    + W+ DV S++       +  S  +T++    +VPY  +RV  S FTY F V +G+KF+RL+FYP+   G N             TLL+NFSAS  A     +   KEF +N+E     LN+TFTP    +++YAF+NGIE+ SMP    Y++ D   G    VG     +I N  AL  +YR+NVGG  ISPS DT G+YR+W  D PY+  A    P     N +I + T    Y AP
Sbjct:   36 ILLNCGGGASNLTDTDNRIWISDVKSKFLSSSSEDSKTSPALTQDPSVPEVPYMTARVFRSPFTYTFPVASGRKFVRLYFYPNSYDGLNATNSLFSVSFGPYTLLKNFSASQTAEALTYAFIIKEFVVNVEGG--TLNMTFTPESAPSNAYAFVNGIEVTSMP--DMYSSTD---GTLTMVGSSGSVTIDNSTALENVYRLNVGGNDISPSADT-GLYRSWYDDQPYIFGAGLGIPETADPNMTIKYPTGTPTYVAP 284          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.959e-27
Identity = 96/270 (35.56%), Postives = 134/270 (49.63%), Query Frame = 2
Query:   11 CHHLAV-------VVTGDSNYPLAESNIFLA-CGWLGNTGP-PGQTWVGDVNSQYSPH--EDASAPKSTIVTEN--KQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSP-KPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGF----RFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTDARPSALP 766
            CH L +       VV   ++Y    +++FL  CG   N     G+ W  +     S +  +DAS   S    E+   QVPY K+R+    FTY F V+ G KF+RL+FYP+     F+             TLL NFS   +    + S   KEF + +    + L++TFTPSP   +S AF+NGIEI+SMP  FY        GGF    R VG+D  + I N  A  T+YR+NVGGK +    D+ GM+R W  D+ +L      A+P
Sbjct:    3 CHVLVIFTILVSAVVDATASYE--PTDVFLINCGDTSNNMDYSGRNWTTENPKFMSSNAVDDASFTSSASYQESGIPQVPYLKARIFRYDFTYSFPVSPGWKFLRLYFYPTRYGSDFDAVKSFFSVNVNRFTLLHNFSVKASI--PESSSLIKEFIVPV---NQTLDLTFTPSP---NSLAFVNGIEIISMPDRFY------SKGGFDDVVRNVGRDVDFEIDNSTAFETVYRVNVGGKVVGDVGDS-GMFRRWLSDEGFLLGINSGAIP 255          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.198e-26
Identity = 90/267 (33.71%), Postives = 121/267 (45.32%), Query Frame = 2
Query:   44 SNYPLAESNIFLACGWLGNTGPPGQTWVGD---VNSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSPKPG-FNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFF--KEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTDARPSALPVNQSIHLTWIR---NYSAPD 817
            S Y   +  +F       N    G+ W  +   + S    +   +A  S   +   Q+PY  +R+  S+FTY F VT G  F+RL+FYP+     FN             TLL NFSA L    +     F  KEF I +    + LN+TFTPS    DS AF+NGIEIVS+P  FY     D       VG    + I N  A  T+YR+NVGGK +  S    GM+R W  DD  +        P+   I + +     +Y APD
Sbjct:   24 STYEPTDVFLFNCGDTSNNVDVSGRNWTAENQKILSSNLVNASFTAQASYQESGVSQIPYMTARIFRSEFTYSFPVTPGSNFLRLYFYPTRYGSQFNAVKSFFSVKVNGFTLLNNFSADLTVKASKPQTEFIIKEFIIPV---YQTLNLTFTPS---LDSLAFVNGIEIVSIPNRFYSKGGFD--DVITNVGSSVDFHIENSTAFETVYRLNVGGKTVGDS----GMFRRWVSDDEIILSESSGISPIVPDIKINYTEKTPSYVAPD 278          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.083e-25
Identity = 92/267 (34.46%), Postives = 129/267 (48.31%), Query Frame = 2
Query:   29 VVTGDSNYPLAESNIFLACGWLGNTGPP----GQTWVGDVNSQYSPHEDASAPKSTIVTENK----QVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYP-SPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGN--DRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGF----RFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDD---------PYLTDARPS 757
            +V+  +  P    ++FL     G T  P    G+TW  +  +    + D ++  S +  + +    QVPY  +R+  S FTY F V+ G KF+RL+FYP S K GF+             TLL+NFSA L    +  +     KEF + +      LN+TF PS   N+S AF+NGIEIVSMP  FY        GGF      VG    + I N  A  T++R+NVGG  +   +D+ GM+R W  DD         PY+ D   S
Sbjct:   12 LVSVSATAPYKPDDVFLIN--CGETDVPFDNHGRTWTQEEKNILPKNSDNASFSSVVSYKEESGIPQVPYMTARIFRSDFTYSFPVSPGWKFLRLYFYPTSYKSGFDAVNSFVSVTVNDFTLLQNFSADLTVKASIPESKSLIKEFIVPV---YLTLNLTFRPS---NNSLAFVNGIEIVSMPDRFY------SKGGFDDLITNVGSLIDFEIDNSTASETVHRLNVGGHMVDEVNDS-GMFRRWLSDDYEFLIGGVSPYMPDVNIS 263          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.916e-25
Identity = 77/204 (37.75%), Postives = 111/204 (54.41%), Query Frame = 2
Query:  134 VNSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSP-KPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGND--RSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPY 736
            VN+ ++   +AS  K+ +     ++PY K+R+  S+FTY F VT G  F+RL+FYP+  K GF+             TLLRNF+A      +    +   KEF I +    + LN+TFTPS    +  AF+NGIEIVSMP  FY     D     R V  D  + I N  A  +++R+NVGG+ ++  DD+ GM+R W  DD +
Sbjct:   60 VNASFT--SEASYQKAGV----SRIPYMKARIFRSEFTYSFPVTPGSIFLRLYFYPTQYKSGFDAVNSFFSVKVNGFTLLRNFNADSTVQASIPLSNSLIKEFIIPV---HQTLNLTFTPS---KNLLAFVNGIEIVSMPDRFYSKGGFD--NVLRNVSSDVDFQIDNSTAFESVHRLNVGGQIVNEVDDS-GMFRRWLSDDSF 248          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22
Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 2
Query:  206 VPYSKSRVSHSQFTYIFNVTAGQK-FIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTDA 748
            VPY  +R+  +  TY   +   ++  +RL+FYPS   G N             TLL NFSA++      ++   KE+ +    D+ +L+I FTPS  Y D++AFINGIE++ MP   + TAA         VG  +         L +++R+NVGG+ I  S D+GG+ RTW  D PY+  A
Sbjct:   75 VPYMTARIFTAPATYEIPIKGDKRHLLRLYFYPSTYTGLNISNSYFTVEANDVTLLSNFSAAITCQALTQAYLVKEYSL-APTDKDVLSIKFTPSDKYRDAFAFINGIEVIQMP-ELFDTAA--------LVGFTDQTMDAKTANLQSMFRLNVGGQDIPGSQDSGGLTRTWYNDAPYIFSA 246          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21
Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = 2
Query:  206 VPYSKSRVSHSQFTYIFNVTAGQK-FIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTDA 748
            VPY  SR+  +  TY   V   ++  +RLHFYPS   G N             TLL NFSA++      ++   +E+ +    ++ +L+I FTPS  +  ++AFINGIE++ MP   + TA+         VG  +  S      L T++R+NVGG+ I  S D+GG+ RTW  D PY+  A
Sbjct:   76 VPYMTSRIFTAPATYEIPVKGDKRHMLRLHFYPSTYTGLNILDSYFSVAANDLTLLSNFSAAITCQALTQAYLVREYSL-APSEKDVLSIIFTPSDKHPKAFAFINGIEVIPMP-ELFDTAS--------LVGFSDQTSDTKTANLQTMFRLNVGGQDIPGSQDSGGLTRTWYNDAPYIFSA 247          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.446e-18
Identity = 70/229 (30.57%), Postives = 107/229 (46.72%), Query Frame = 2
Query:   68 NIFLACGWLGNTGPPGQTWVGD---VNSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHSQFTYIFNVTAGQKFIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYLTD 745
            N  + CG   N     + ++ D    N   SP+E  +A        N  + Y  +R+      Y F+V  G+ +IRLHF P     F               LL +F+ S        S   KE+ +N+  D   L +TFTPS    DS+AF+N +E+VS+P   +   + DP     F G    +  L+  AL T+YR+N+GG +++PS+DT  + R WE D  +L +
Sbjct:   30 NYLINCGSSTNVTVTSRVFISDNLASNFLTSPNEILAASNRN---SNSDI-YQTARIFTGISKYRFSVARGRHWIRLHFNPFQYQNFQMVSAKFSVSSETHVLLSDFTVS--------SRVMKEYSLNVATDH--LELTFTPS---GDSFAFLNALEVVSVPDTLF---SGDPS----FAGSPGKFQGLSWQALETVYRVNMGGPRVTPSNDT--LSRIWEPDSEFLVE 232          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.146e-15
Identity = 77/271 (28.41%), Postives = 120/271 (44.28%), Query Frame = 2
Query:    2 FFSCHHLAVVVTGDSNYPLAESNIFLACGWLGNTGPPGQTWVGDV--NSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHSQFTYIFNVTA-GQKFIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYL--------TDARPSALPVNQSI 781
            F SC+      T  S       N  ++CG   N     + +V D   +S      ++S   ST    +    Y  +RV  S  +Y F +T+ G+ +IRLHF P     +N              LL NFS +      + S  FKE+ +N+  +   L ++F PS   N+S  F+N IE+VS+P N     A         +    P+S L++ A  T+YR+N+GG  ++  +DT G  R W+ D  YL          A PS++  + S+
Sbjct:   13 FLSCY----TTTTSSALFNPPDNYLISCGSSQNITFQNRIFVPDSLHSSLVLKIGNSSVATSTTSNNSTNSIYQTARVFSSLASYRFKITSLGRHWIRLHFSPINNSTWNLTSASITVVTEDFVLLNNFSFN----NFNGSYIFKEYTVNVTSE--FLTLSFIPS---NNSVVFVNAIEVVSVPDNLIPDQA-------LALNPSTPFSGLSLLAFETVYRLNMGGPLLTSQNDTLG--RQWDNDAEYLHVNSSVLVVTANPSSIKYSPSV 261          
BLAST of FC878078 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15
Identity = 72/255 (28.24%), Postives = 113/255 (44.31%), Query Frame = 2
Query:    2 FFSC---HHLAVVVTGDSNYPL-----AESNIFLACGWLGNTGPPGQTWVGDVNSQYSPHEDASAPKSTIVTENKQVPYSKSRVSHSQFTYIFNVTA-GQKFIRLHFYPSPKPGFNTXXXXXXXXXXXXTLLRNFSASLAAYGNDRSPFFKEFCINIEDDQRLLNITFTPSPDYNDSYAFINGIEIVSMPLNFYYTAADDPGGGFRFVGQDNPYSILNINALATLYRINVGGKQISPSDDTGGMYRTWEMDDPYL 739
            FF C   H      T   NY +       ++ F    +L ++  PG +++    S  S  +   +P S ++       Y+ +RV     +Y F VT  G  FIRLHF P     FN             +++ +FS S        S   KEF + I+D   +L I+F P       + F+N +E+ S P ++      D G           +S L+   L T++RINVGG +++P +DT  ++RTW +DD YL
Sbjct:   13 FFFCPLLHLSFAAFTPTDNYLINSGSNTNTSFFTTRSFLSDSSEPGSSFLSTDRS-ISISDTNPSPDSPVL-------YNTARVFPVGGSYKFQVTTKGTHFIRLHFAPFKASRFNLRSAKFRVLINGFSVINSFSTS--------SVVVKEFILKIDDP--VLEISFLPFKA--SGFGFVNAVEVFSAPKDYIM----DQGTKLVIPNSAQIFSNLSSQVLETVHRINVGGSKLTPFNDT--LWRTWVVDDNYL 241          
The following BLAST results are available for this feature:
BLAST of FC878078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
FERON_ARATH9.968e-3638.13Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5389_ARATH4.959e-2735.56Probable receptor-like protein kinase At5g38990 OS... [more]
Y5900_ARATH4.198e-2633.71Putative receptor-like protein kinase At5g39000 OS... [more]
Y5393_ARATH2.083e-2534.46Probable receptor-like protein kinase At5g39030 OS... [more]
Y5392_ARATH7.916e-2537.75Probable receptor-like protein kinase At5g39020 OS... [more]
ANX1_ARATH8.192e-2235.16Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
ANX2_ARATH2.384e-2135.16Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5597_ARATH1.446e-1830.57Probable receptor-like protein kinase At5g59700 OS... [more]
THE1_ARATH1.146e-1528.41Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5241_ARATH7.427e-1528.24Probable receptor-like protein kinase At5g24010 OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA80CB11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA80CB11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878078 ID=FC878078; Name=FC878078; organism=Citrus clementina; type=EST; length=823bp
CTTCTTCTCCTGCCATCATCTAGCTGTTGTCGTCACCGGTGACTCTAATT
ACCCTCTAGCAGAAAGCAACATATTTCTTGCTTGTGGCTGGTTGGGCAAC
ACGGGTCCTCCCGGCCAGACTTGGGTTGGAGATGTCAACTCTCAATACTC
CCCACATGAAGACGCATCCGCTCCCAAATCAACAATCGTCACTGAAAATA
AACAAGTCCCATATTCAAAATCACGTGTTTCTCATTCGCAATTCACCTAC
ATATTCAACGTCACCGCCGGTCAAAAGTTCATCCGCCTGCATTTCTATCC
AAGTCCAAAACCGGGGTTCAATACCTCTGCAGCTTTCTTCTCTGTAAAAG
CAGCTTCTTTCACTCTGTTAAGAAACTTTAGCGCTTCACTTGCAGCATAT
GGCAACGACCGCAGTCCCTTTTTCAAAGAATTCTGCATTAACATCGAAGA
CGATCAGAGGCTTTTGAACATAACCTTCACTCCAAGTCCGGATTACAACG
ATTCATATGCTTTTATCAATGGAATTGAGATTGTATCCATGCCCCTCAAT
TTCTATTACACCGCGGCCGATGATCCCGGCGGGGGGTTCAGGTTTGTTGG
CCAGGACAACCCATACAGTATCTTAAACATAAATGCTCTGGCGACTTTAT
ACCGGATAAACGTCGGCGGGAAACAAATATCACCGTCAGACGACACCGGC
GGCATGTACCGAACTTGGGAAATGGACGACCCCTACTTGACAGATGCCAG
ACCAAGTGCTCTTCCCGTTAACCAGAGTATTCATCTCACTTGGATACGTA
ATTACTCTGCTCCAGATCTGGTC
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