FC878091

Overview
NameFC878091
Unique NameFC878091
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8101 contig Ccv1_Contig8101:34..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY2_AEDAE (Probable citrate synthase 2, mitochondrial OS=Aedes aegypti GN=AAEL011789 PE=3 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.222e-102
Identity = 183/242 (75.62%), Postives = 210/242 (86.78%), Query Frame = 3
Query:   48 MALFRITTTKLVEVQK-ACPSASILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWSAH 770
            MAL RI ++KL    K   P  +  +R  S +ST+LK++L EKIPKEQE+++ FRK+ G+TKVGEVTVDMMYGGMRGIKGLV ETSVLDPDEGIRFRGLSIPECQ+ LPKA GG EPLPEGLFWLL+TGDVPT+AQ  ALS+EWA+RA LP+HVVTMLNNMP+ LHPMSQ S AVTALN ESK+AKAYS+GVHKSKYWEYVYED+MDLIAKLPV+AATIYRNTYRDG+GIGA+D  KDWSA+
Sbjct:    1 MALSRIYSSKLASANKNLLPVITTYVRNAS-DSTDLKAVLSEKIPKEQERVKNFRKQFGATKVGEVTVDMMYGGMRGIKGLVCETSVLDPDEGIRFRGLSIPECQKVLPKAPGGAEPLPEGLFWLLITGDVPTKAQVDALSREWANRAALPSHVVTMLNNMPTTLHPMSQLSCAVTALNHESKYAKAYSEGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTYRDGKGIGAIDPKKDWSAN 241          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY1_AEDAE (Probable citrate synthase 1, mitochondrial OS=Aedes aegypti GN=AAEL002956 PE=3 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 3.222e-102
Identity = 183/242 (75.62%), Postives = 210/242 (86.78%), Query Frame = 3
Query:   48 MALFRITTTKLVEVQK-ACPSASILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWSAH 770
            MAL RI ++KL    K   P  +  +R  S +ST+LK++L EKIPKEQE+++ FRK+ G+TKVGEVTVDMMYGGMRGIKGLV ETSVLDPDEGIRFRGLSIPECQ+ LPKA GG EPLPEGLFWLL+TGDVPT+AQ  ALS+EWA+RA LP+HVVTMLNNMP+ LHPMSQ S AVTALN ESK+AKAYS+GVHKSKYWEYVYED+MDLIAKLPV+AATIYRNTYRDG+GIGA+D  KDWSA+
Sbjct:    1 MALSRIYSSKLASANKNLLPVITTYVRNAS-DSTDLKAVLSEKIPKEQERVKNFRKQFGATKVGEVTVDMMYGGMRGIKGLVCETSVLDPDEGIRFRGLSIPECQKVLPKAPGGAEPLPEGLFWLLITGDVPTKAQVDALSREWANRAALPSHVVTMLNNMPTTLHPMSQLSCAVTALNHESKYAKAYSEGVHKSKYWEYVYEDSMDLIAKLPVVAATIYRNTYRDGKGIGAIDPKKDWSAN 241          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_DROME (Probable citrate synthase, mitochondrial OS=Drosophila melanogaster GN=kdn PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.237e-95
Identity = 166/241 (68.88%), Postives = 203/241 (84.23%), Query Frame = 3
Query:   48 MALFRITTTKLVEVQKACPSASILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWSAH 770
            M+L+RI+  KL E QK  P+    +R ++A+  +L+ +L  K+P+EQE+++ FRK+HG+TK+GE T+DMMYGGMRGIK LV ETSVLD DEGIRFRGLSIPECQ+ LP A GG EPLPEGLFWLL+TG+VPT++Q + LS+EWA RA LP HVVTMLNNMP+ LHPMSQF+AAVTALN +SKFAKAYSDGVHKSKYWEYVYED+MDLIAKLPV+AATIY NTYR G+G  ++D + DWSA+
Sbjct:    1 MSLYRISARKLSEAQKL-PNVGAYVRMIAADGKSLRDVLAAKVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMPTTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCNTYRGGKGSRSIDSSLDWSAN 240          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_GLOMM (Probable citrate synthase, mitochondrial OS=Glossina morsitans morsitans PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 3.230e-94
Identity = 169/242 (69.83%), Postives = 206/242 (85.12%), Query Frame = 3
Query:   48 MALFRITTT-KLVEVQKACPSASILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWSAH 770
            M+++RI+TT K+ EVQK     +  +R +SA+S+ L+ +L  KIP EQE+++ FRK+HGS K+GE TVDMMYGGMRGIK LV ETSVLD DEGIRFRGLSIPECQ+ LP A GGEEPLPEGLFWLL+TG+VP++AQ K +S+EWA+RA LP HVVTMLNN P+ LHPMSQFSAA+TALN +SKFAKAYSDGVHKSKYWE+VYED+MDLIAKLPV+AATIY NTYR+G+G  ++D + DWSA+
Sbjct:    1 MSIYRISTTRKMPEVQKLNALLASYVRFISADSS-LRDVLAAKIPAEQERVKNFRKQHGSFKMGETTVDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIPECQKVLPAADGGEEPLPEGLFWLLLTGEVPSKAQVKQVSREWAARAALPQHVVTMLNNFPTSLHPMSQFSAAITALNHDSKFAKAYSDGVHKSKYWEHVYEDSMDLIAKLPVVAATIYCNTYRNGKGSKSIDSSLDWSAN 241          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_KATPE (Citrate synthase, mitochondrial OS=Katsuwonus pelamis GN=cs PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 8.796e-92
Identity = 156/217 (71.89%), Postives = 186/217 (85.71%), Query Frame = 3
Query:  114 ILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            +  R  SA +TNLK +L + IPKEQ +I+ F++++G T +G++TVDM+YGGMRG+KGLV+ETSVLDP+EGIRFRG SIPECQ+ LPKA GGEEPLPEGLFWLLVTG VPTE Q K +SKEWA RA LP+HVVTML+N P+ LHPMSQFSAA+TALNSES FA+AYS+GVHK+KYWE+VYED+MDLIAKLP IAA IYRN YR+G  IGA+D N DWS
Sbjct:   24 VAARNASASTTNLKDVLSDLIPKEQSRIKNFKQQYGKTNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQKLLPKAPGGEEPLPEGLFWLLVTGQVPTEEQVKWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNSESSFARAYSEGVHKTKYWEFVYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS 240          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_TETAD (Citrate synthase, mitochondrial OS=Tetrapturus audax GN=cs PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.500e-91
Identity = 156/217 (71.89%), Postives = 185/217 (85.25%), Query Frame = 3
Query:  114 ILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            +  R  SA STNLK +L + IPKEQ +I+ F++++G T +G++TVDM+YGGMRG+KGLV+ETSVLDP+EGIRFRG SIPECQ+ LPKA GGEEPLPEGLFWLLVTG VPTE Q   +SKEWA RA LP+HVVTML+N P+ LHPMSQFSAA+TALNSES FA+AYS+GVHKSKYWE++YED+MDLIAKLP IAA IYRN YR+G  IGA+D N DWS
Sbjct:   24 VAARNASASSTNLKDVLADLIPKEQTRIKNFKQQYGKTNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQKLLPKAPGGEEPLPEGLFWLLVTGQVPTEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNSESSFARAYSEGVHKSKYWEFIYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS 240          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_MACFA (Citrate synthase, mitochondrial OS=Macaca fascicularis GN=CS PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.500e-91
Identity = 159/214 (74.30%), Postives = 183/214 (85.51%), Query Frame = 3
Query:  123 RGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            R  SA STNLK IL + IPKEQ +I+ FR++HG T VG++TVDMMYGGMRG+KGLV+ETSVLDPDEGIRFRG SIPECQ+ LPKAKGGEEPLPEGLFWLLVTG +PTE Q   LSKEWA RA LP+HVVTML+N P+ LHPMSQ SAAVTALNSES FA+AY++G+ ++KYWE +YED+MDLIAKLP IAA IYRN YR+G GIGA+D N DWS
Sbjct:   24 RHASASSTNLKDILADLIPKEQARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESNFARAYAEGISRTKYWELIYEDSMDLIAKLPCIAAKIYRNLYREGSGIGAIDSNLDWS 237          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_XIPGL (Citrate synthase, mitochondrial OS=Xiphias gladius GN=cs PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.559e-91
Identity = 155/217 (71.43%), Postives = 185/217 (85.25%), Query Frame = 3
Query:  114 ILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            +  R  SA STNLK +L + IPKEQ +I+ F++++G T +G++TVDM+YGGMRG+KGLV+ETSVLDP+EGIRFRG SIPECQ+ LPKA GGEEPLPEGLFWLLVTG VPTE Q   +SKEWA RA LP+HVVTML+N P+ LHPMSQFSAA+TALNSES FA+AYS+GVHK+KYWE++YED+MDLIAKLP IAA IYRN YR+G  IGA+D N DWS
Sbjct:   24 VAARNASASSTNLKDVLADLIPKEQTRIKNFKQQYGKTNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQELLPKAPGGEEPLPEGLFWLLVTGQVPTEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNSESSFARAYSEGVHKTKYWEFIYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS 240          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_THUOB (Citrate synthase, mitochondrial OS=Thunnus obesus GN=cs PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 4.365e-91
Identity = 155/217 (71.43%), Postives = 185/217 (85.25%), Query Frame = 3
Query:  114 ILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            +  R  SA +TNLK +L + IPKEQ +I+ F++++G T +G++TVDM+YGGMRG+KGLV+ETSVLDP+EGIRFRG SIPECQ+ LPKA GGEEPLPEGLFWLLVTG VPTE Q   +SKEWA RA LP+HVVTML+N P+ LHPMSQFSAA+TALNSES FA+AYS+GVHK+KYWE+VYED+MDLIAKLP IAA IYRN YR+G  IGA+D N DWS
Sbjct:   24 VAARNASASTTNLKDVLADLIPKEQSRIKNFKQQYGKTNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQKLLPKAPGGEEPLPEGLFWLLVTGQVPTEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNSESSFARAYSEGVHKTKYWEFVYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS 240          
BLAST of FC878091 vs. ExPASy Swiss-Prot
Match: CISY_THUAL (Citrate synthase, mitochondrial OS=Thunnus albacares GN=cs PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 4.365e-91
Identity = 155/217 (71.43%), Postives = 185/217 (85.25%), Query Frame = 3
Query:  114 ILLRGLSAESTNLKSILQEKIPKEQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDPDEGIRFRGLSIPECQQQLPKAKGGEEPLPEGLFWLLVTGDVPTEAQAKALSKEWASRAELPAHVVTMLNNMPSKLHPMSQFSAAVTALNSESKFAKAYSDGVHKSKYWEYVYEDTMDLIAKLPVIAATIYRNTYRDGQGIGALDDNKDWS 764
            +  R  SA +TNLK +L + IPKEQ +I+ F++++G T +G++TVDM+YGGMRG+KGLV+ETSVLDP+EGIRFRG SIPECQ+ LPKA GGEEPLPEGLFWLLVTG VPTE Q   +SKEWA RA LP+HVVTML+N P+ LHPMSQFSAA+TALNSES FA+AYS+GVHK+KYWE+VYED+MDLIAKLP IAA IYRN YR+G  IGA+D N DWS
Sbjct:   24 VAARNASASTTNLKDVLADLIPKEQSRIKNFKQQYGKTNIGQITVDMVYGGMRGMKGLVYETSVLDPEEGIRFRGYSIPECQKLLPKAPGGEEPLPEGLFWLLVTGQVPTEEQVNWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQFSAAITALNSESSFARAYSEGVHKTKYWEFVYEDSMDLIAKLPCIAAKIYRNLYREGSSIGAIDSNLDWS 240          
The following BLAST results are available for this feature:
BLAST of FC878091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CISY2_AEDAE3.222e-10275.62Probable citrate synthase 2, mitochondrial OS=Aede... [more]
CISY1_AEDAE3.222e-10275.62Probable citrate synthase 1, mitochondrial OS=Aede... [more]
CISY_DROME2.237e-9568.88Probable citrate synthase, mitochondrial OS=Drosop... [more]
CISY_GLOMM3.230e-9469.83Probable citrate synthase, mitochondrial OS=Glossi... [more]
CISY_KATPE8.796e-9271.89Citrate synthase, mitochondrial OS=Katsuwonus pela... [more]
CISY_TETAD1.500e-9171.89Citrate synthase, mitochondrial OS=Tetrapturus aud... [more]
CISY_MACFA1.500e-9174.30Citrate synthase, mitochondrial OS=Macaca fascicul... [more]
CISY_XIPGL2.559e-9171.43Citrate synthase, mitochondrial OS=Xiphias gladius... [more]
CISY_THUOB4.365e-9171.43Citrate synthase, mitochondrial OS=Thunnus obesus ... [more]
CISY_THUAL4.365e-9171.43Citrate synthase, mitochondrial OS=Thunnus albacar... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878091 ID=FC878091; Name=FC878091; organism=Citrus clementina; type=EST; length=772bp
CGTGCCGTCGCCGCTGTGGTGTGTGAATTTGGTTTTGGTGGTTAAAAATG
GCACTTTTTAGGATTACCACTACTAAACTAGTAGAAGTACAGAAAGCATG
CCCGTCGGCATCGATACTTCTGCGTGGTCTGAGTGCCGAAAGTACAAACC
TGAAGAGCATCCTTCAGGAGAAGATCCCAAAGGAACAGGAGAAGATCCGC
GAGTTCCGTAAGAAGCATGGATCCACCAAGGTCGGGGAGGTCACCGTCGA
CATGATGTACGGAGGCATGCGTGGCATCAAGGGTCTTGTATGGGAGACGT
CGGTGTTGGACCCTGATGAGGGCATCAGGTTCCGCGGCCTGTCGATCCCG
GAGTGCCAGCAGCAGCTGCCCAAGGCCAAGGGCGGCGAGGAACCGCTCCC
CGAGGGCCTGTTCTGGTTGCTCGTCACCGGCGACGTGCCCACCGAGGCCC
AGGCCAAGGCTCTGTCCAAGGAATGGGCTTCTAGGGCTGAGCTGCCGGCC
CACGTGGTGACGATGCTGAACAACATGCCGAGCAAGTTGCACCCCATGTC
TCAGTTCTCGGCCGCCGTCACCGCCCTGAACAGCGAGAGCAAGTTCGCCA
AGGCCTACTCCGACGGAGTACACAAGTCCAAGTATTGGGAGTACGTATAC
GAAGACACGATGGACCTGATTGCCAAGCTGCCGGTGATCGCGGCCACCAT
CTACCGCAACACTTACCGCGATGGGCAAGGAATCGGTGCCCTTGACGACA
ACAAGGATTGGTCCGCCCACTA
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