FC878097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 1.767e-124 Identity = 203/280 (72.50%), Postives = 242/280 (86.43%), Query Frame = 3 Query: 81 RNLPIVPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKV 920 + LP++ FDEGY+ LFG NL+VHRDGKSV L+LDERTGSGFVS+D+YLHGFFS+SIKLPADY+AGVV+AFY+SNGD++EKNHDEIDFEFLGNIRG+ WRIQTNIYGNGST +GREERYNLWFDP++DFHQYSILW+ S IIFY+D +PIRE KRTASMGGDFPAKPMSLY+TIWDGS WAT+GGKY VNYKYAPYV++F+D +LHGC+ DP E+ S C + + + ++ SQR KME FR+KHMTYSYCYD +RYKV ECV+NP EA+RL+V Sbjct: 24 QKLPLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPS-CKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVLSECVVNPAEAKRLRV 302
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 437.958 bits (1125), Expect = 3.684e-122 Identity = 204/280 (72.86%), Postives = 232/280 (82.86%), Query Frame = 3 Query: 81 RNLPIVPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLKV 920 +NLPI F+E Y+ LFG NL VH+DGKSV L+LDERTGSGFVS+D YLHGFFSASIKLP+DYTAGVVVAFYMSNGDM+EKNHDEIDFEFLGNIR K WR+QTNIYGNGST GREERYNLWFDP++DFHQYSILW+DS IIF++D +PIRE KRTA MGG FP+KPMSLY TIWDGS WATNGGKY VNYKYAPY+ FSD VLHGC DPIEQ +CD + + ++PSQR KM+ FRR+ MTYSYCYD+ RY V ECV+NP EA+RL+V Sbjct: 24 QNLPITSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQ-FPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSECVVNPAEAQRLRV 302
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 355.91 bits (912), Expect = 1.841e-97 Identity = 171/284 (60.21%), Postives = 204/284 (71.83%), Query Frame = 3 Query: 78 YRNLPIVPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKC----DITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLK 917 + NL + F+E S LFG NLV D SV L LD TGSGF+S ++Y HGF+S+ IKLPADYTAGVVVAFY SNGD+FEK HDE+D EFLGNI+GK WR QTN+YGNGST GREERY LWFDPS +FH+YSILWT +IIF++D +PIRE R +MG D+PAKPM+LYATIWD SDWAT+GGKY+ NYK+AP+V EF F L GCS DPI++ C D ES S ++ QR M FR++ M YSYCYD +RY P ECVI P E +R K Sbjct: 24 FTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYS---SINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPECVIVPAEKDRFK 304
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 8.851e-92 Identity = 161/290 (55.52%), Postives = 203/290 (70.00%), Query Frame = 3 Query: 84 NLPIVPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFD---PIEQTSS--------KCDITESSKVSIP-TGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVINPLEAERLK 917 N+ + FDEG SHLFG NL+ D +SV L LD+ TGSGF+S +Y HGFFS+ IKLP YTAG+VVAFY SNGD+F K+HDE+D EFLGN+ GK WR QTN+YGNGST+ GREERY LWFDPS +FH+YSILWT ++IIF++D +PIRE R M GD+P KPMSLYATIWD S WAT+GGK+ V+Y ++P+V+EF D L GC+ P E ++ C +++ +S + +SP Q M FR ++M YSYCYD IRY VPP ECVI E R + Sbjct: 34 NINPIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPECVIVTAEKNRFR 323
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 2.345e-68 Identity = 127/271 (46.86%), Postives = 171/271 (63.10%), Query Frame = 3 Query: 96 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQT-SSKCDITESSKVSIP-------TGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 884 + + G+S FG N+ V+ G L+LD+ +G+G VS + Y +GFFSA +KLPA + +GVVVAFY+SN + + K+HDEID E LG R +W IQTN+Y NGST GREE++ WFDP+ FH Y+++W +F +D IP+R+F + +P+KPMSLY T+WDGS+WAT GGKY VNYKYAP+V +D L GCS + T S C + S S+ +S +Q M+ RRK M YSYC D+ RYKV P EC Sbjct: 41 IAIENGFSRRFGAHNIQVN--GSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFATLSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAEC 309
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.628e-61 Identity = 119/265 (44.91%), Postives = 163/265 (61.51%), Query Frame = 3 Query: 96 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYM-SNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITES-SKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 884 + FD Y +G D+++ GK V LS+D +GSGF S Y GFF IKLP +AGVV AFY+ S GD HDE+DFEFLGN +GK IQTN++ NG GRE+++ WFDP+ FH Y ILW QI+FY+D +PIR FK G ++P+KPM L A++W+G +WAT+GGK ++N+ YAP+ ++ F HGC + ++ C T + +S +++ MEN R K+MTY YC D+ RY VPP EC Sbjct: 30 IDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQG--GREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVPPSEC 288
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.200e-58 Identity = 117/270 (43.33%), Postives = 165/270 (61.11%), Query Frame = 3 Query: 96 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTG----VSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFECVIN 893 V FD+ Y +G +N++ GK V LSLD +GSGF S + Y GFF IK+P T+GVV AFY+++ HDE+DFEFLGN GK +QTN++ NG + RE++ LWFDPS DFH Y+ILW QI+ Y+D IP+R FK T S G ++P+KPM + ++W+G +WAT+GGK ++N+ AP+ F F GC T+++ + SS TG +S S++ N R+K+M Y YC D++R+ VPP EC N Sbjct: 37 VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKG---NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGN--REQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCF------TNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSECKWN 294
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.277e-55 Identity = 109/267 (40.82%), Postives = 158/267 (59.18%), Query Frame = 3 Query: 96 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTG----VSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 884 V F + Y +G ++ G+ V L +D+ +G GF S D Y G F IK+P+ T G+V AFY+++ HDEIDFEFLGN GK +QTN++ NG + REER+ LWF+P+ +H Y +LW QI+FY+D IPIR +K G +P+KPM + A++W+G DWAT+GG+ +VN+ Y+P++ F DF L GC+ D C ESS G +S +++ E+ R K+M Y YC D+ +Y+ PP EC Sbjct: 33 VTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKG---GGHDEIDFEFLGNNNGKPVTLQTNLFLNGEGN--REERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN--ENGVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGAC---ESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.381e-52 Identity = 106/267 (39.70%), Postives = 160/267 (59.93%), Query Frame = 3 Query: 96 VPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSK---VSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 884 VPF Y + D++ G VHL LD+ TG+GF S YL G FS IK+ A +AG V AFY+S+ + HDEIDFEFLGN G+ + +QTN++ G+ + RE+R NLWFDPS D+H YS+LW QI+F++D +PIR FK + +G FP +PM +Y+++W+ DWAT GG + N++ AP+V + F + GC ++K T+ + + +Q +++ R+++ Y+YC D++R+ VPP EC Sbjct: 30 VPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQN---SEHDEIDFEFLGNRTGQPYILQTNVFTGGAGN--REQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCE----ASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287
BLAST of FC878097 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 3.077e-52 Identity = 108/269 (40.15%), Postives = 155/269 (57.62%), Query Frame = 3 Query: 87 LPIVPFDEGYSHLFGHDNLVVHRDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGS---TSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 884 +P PFD + L+G + R+ V L LD+ TGSGF S Y G+F ASIKL +TAGV + Y+SN +HDE+D EFLG GK + +QTN++ GS IGRE ++ LWFDP+ DFH Y+ILW +QI+F++D +PIR + R FP +PM +Y +IWD SDWAT G+ + +Y+Y P+V ++ +F L GC+ D +SS C + + G+S Q + +R + Y+YC+D R EC Sbjct: 34 VPTSPFDREFRTLWGSQHQ--RREQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNE--AIFPTRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTAD----SSSSCRPPSPAPMR-NRGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293 The following BLAST results are available for this feature:
BLAST of FC878097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878097 ID=FC878097; Name=FC878097; organism=Citrus clementina; type=EST; length=921bpback to top |