FC878100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878100 vs. ExPASy Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 348 TFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVKSRSTAAAS 629 +F IWPP QRTRDAVI RLIE+L+TPS+LSKRYG +P DEA TAR IE GIE+LQVYSKEISKRM++ VKSRS AA+ Sbjct: 25 SFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAAAGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAA 118
BLAST of FC878100 vs. ExPASy Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 9.057e-23 Identity = 61/149 (40.94%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 225 PQQESKK-LDARNDIPHQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVKSRSTAAASGISSGVDDTTSPA 668 P+ ES + A D QE+ D D+ ++ + ++ RIWPP Q+TRDAV+ RLIETL+T S+LSKRYG + +D+A A+ IE GI++L++YSKEISKRMLE+VK+RS A+ + V+D + A Sbjct: 17 PESESSTTISAMTDPTSQEAASKDT--DLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKARSNASVG--NGSVEDANTDA 161
BLAST of FC878100 vs. ExPASy Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.231e-21 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 306 IPQQESKKL-NFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVKSRSTAAA------SGISSGVD 650 +P E++K N ++ RIWPP Q+TRDAVI RLIETL+T S+LSKR+G++ ++EA A+ IE+ GIE+L+ YSKEISKRMLE+VK++S A+ GI S VD Sbjct: 26 LPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKAKSNVASPPPKDGDGIESAVD 147
BLAST of FC878100 vs. ExPASy Swiss-Prot
Match: WPP3_ARATH (WPP domain-containing protein 3 OS=Arabidopsis thaliana GN=WPP3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.570e-11 Identity = 42/129 (32.56%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 243 KLDARNDIPHQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVKSRSTAAAS 629 +L++R+D + S R+D + +K+ + F +WPP Q++RD V+ +I+TL+T S+LS +YG + +EA A+ IE GI+ L+VY E S+RM+E+ + R A S Sbjct: 18 QLESRSD---ETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKYGTIKPEEASAVAKSIEE--KAYDIASRFVSSDGIKNLEVYGIETSERMIESAEVRFKANGS 141 The following BLAST results are available for this feature:
BLAST of FC878100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878100 ID=FC878100; Name=FC878100; organism=Citrus clementina; type=EST; length=943bpback to top |