FC878143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.369e-82 Identity = 100/150 (66.67%), Postives = 114/150 (76.00%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQN------IVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFR IV+D+RD FGSLSRRSFDFRL+ + + +++Q S WA+LPPELL DVIKRLEESES+WPARKHVVACA+VCRSWRAMC+EIV PE CGKLTFPVSLKQPG RD IQCFIKRDKS LT+HLF L+ Sbjct: 1 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLS 150 HSP 2 Score: 127.102 bits (318), Expect = 1.369e-82 Identity = 60/72 (83.33%), Postives = 69/72 (95.83%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSAN 826 FLCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDADNISRSS++Y+GKLRSNFLGTKF++YDTQPP +++ Sbjct: 146 FLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSS 217
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 3.038e-82 Identity = 104/148 (70.27%), Postives = 119/148 (80.41%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXN--DLHDQNIV--IQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRDVRDS GSLSRRSFDF+L+ + D H++ +V IQ + WA+LPPELL DVIKRLEESES WPAR+HVVACA+VCRSWR MCKEIV+SPE GK+TFPVSLKQPG RD T+QCFIKRDKSNLTYHL+ L+ Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLS 148 HSP 2 Score: 120.939 bits (302), Expect = 3.038e-82 Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTS 820 +LCLSPALLVENGKFLLSAKR RRTT TEYVISM AD ISRSS+TYIGK+RSNFLGTKFIIYDTQP + S Sbjct: 144 YLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNS 213
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 3.963e-82 Identity = 101/150 (67.33%), Postives = 116/150 (77.33%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRL------TXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRDVRDSFGSLSRRSF+ L T ++L D +++IQ S WASLPPELL DVI+RLE SES+WP+RK VV+CAAVC++WR MCKEIV SPEFCGKLTFP+SLKQPG RDG IQCFIKRDKS TYHL+ L+ Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLS 150 HSP 2 Score: 125.946 bits (315), Expect = 3.963e-82 Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPSG 841 +LCLS A+L ++GKFLLSAKR R+TTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQP + A I P G Sbjct: 146 YLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVG 222
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.496e-78 Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNI------VIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRDVRD FGSLSRR F+ RL ++L D + V+Q+SCWA+LPPELL DVI+RLE SE++WP+RK+VVACAAVCR+WR MC+EIV++PEFCGK+TFPVSLKQPG R+G IQCFIKRDKS TY+L+ L+ Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLS 150 HSP 2 Score: 116.701 bits (291), Expect = 1.496e-78 Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPSGCT 847 +LCLS A+LVE+GKFLLSAKR R TCTEY I M ADN SRSS+ YIGKLRSN LGTKF+IYDTQPP +AN++ SG T Sbjct: 146 YLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKT 224
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.649e-78 Identity = 96/143 (67.13%), Postives = 116/143 (81.12%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVL 623 MSFRSIVRDVRD FGSLSRR F+ R+ ++LHD VIQ+SCWASLPPELL D+I+RLEESE++WP+RKHVVACA VCR+WR MCKEIV++PE CGK+TFP+SL+QPG RDGT+QCFI+RDKS TY+L+ L Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRILGHRRGKSHGAVHELHDPVPVIQSSCWASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSL 143 HSP 2 Score: 104.76 bits (260), Expect = 5.649e-78 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPSGCT 847 +L L A+LV+NGKFLLSAKR TCTEYVISM+A+N+SRS++T IGKLRSNFLGTKF+IYDT P+ + + + SG T Sbjct: 140 YLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKT 218
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.253e-77 Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFR------LTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRDVRDSFGSLSRRSF+ R L+ ++L D+ +V+ S W LPPELL DV+KRLEE ES+WP+RK VVACAAVCR+WR +CK+IV+SPE CGKLTFPVSLKQPG RDG IQCFIKRDKS LTY+L+ L+ Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLS 150 HSP 2 Score: 113.62 bits (283), Expect = 1.253e-77 Identity = 50/73 (68.49%), Postives = 65/73 (89.04%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 829 +LCLSPA+L ENGKFLL+AKR RR T TEY+IS+D+ NISRSS+ Y+GK+RSNFLGTKF++YDTQPP+ + ++ Sbjct: 146 YLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSL 218
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 8.045e-77 Identity = 95/147 (64.63%), Postives = 114/147 (77.55%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXX---NDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRD RDSFG+LS+RSF+ +++ ++L D +V Q S WA LPPELL DV+KRLEE +S+WP+RK VVACA+VC +WR MCK+IVR+PEFCGKLTFPVSLKQPG RDG IQCFIKRDKS LTYHL+ L+ Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLS 147 HSP 2 Score: 113.235 bits (282), Expect = 8.045e-77 Identity = 55/73 (75.34%), Postives = 64/73 (87.67%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 829 +LCLS A+L E GKFLLSAKR+RRTT T+Y+ISMD+ NISRSSS YIGKLRSNFLGTKFIIYDTQPP+ + + Sbjct: 143 YLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTL 215
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.950e-75 Identity = 93/146 (63.70%), Postives = 114/146 (78.08%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXN-DLHDQN-IVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSF SIVRDVRD+ GS SRRSFD R++ + H ++ IVI+N+ WA+LP LL DV+K+L+ESES+WPARK VVACA VC++WR MCK+IV+SPEF GKLTFPVSLKQPG RDG IQC+IKRDKSN+TYHL+ L+ Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIEDLIVIKNTRWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLS 146 HSP 2 Score: 118.242 bits (295), Expect = 1.950e-75 Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANI 829 +L LSPA+LVE+GKFLLSAKR+RR T TEYVISMDADNISRSSSTYIGKL+SNFLGTKFI+YDT P + S+ I Sbjct: 142 YLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQI 214
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.768e-71 Identity = 92/150 (61.33%), Postives = 110/150 (73.33%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFD------FRLTXXXXXXXXXXXNDLHDQNIVIQNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLFCVLA 626 MSFRSIVRDVRD FGSLSRRSF+ + LT ++L D +I S WASLPPELL +VI+RLE ES+WP+R++VV AAVCR+WR MCKE V SPEFCGKLTFPVS+KQPG RDG IQC+IKR++S TYHL+ L+ Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLS 150 HSP 2 Score: 106.301 bits (264), Expect = 2.768e-71 Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANITPSGCT 847 +LCLS + E GKF+L+AKR R+TTCTEY ISM + NISRSS T IGKLRSNFLGTKFIIYDTQPP+ A + G T Sbjct: 146 YLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRT 224
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.935e-58 Identity = 71/143 (49.65%), Postives = 100/143 (69.93%), Query Frame = 3 Query: 195 MSFRSIVRDVRDSFGSLSRRSFDFRLTXXXXXXXXXXXNDLHDQNIVI---QNSCWASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 MSF+S+++D+R GS+SR+ FD R + D ++ + + SCWAS+PPELL DV+ R+E+SE +WP+RK+VV+CA VCR+WR + KEIVR PE KLTFP+SLKQPG R +QC+I R++SN TY+L+ Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRV----VQDTSVPVDAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLY 139 HSP 2 Score: 94.7449 bits (234), Expect = 2.935e-58 Identity = 43/74 (58.11%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 611 FLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSANIT 832 +L L+ A ++GKFLL+AKR RR TCT+Y+IS++ D++SR S+TYIGKLRSNFLGTKF +YD QP + +T Sbjct: 139 YLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVT 212 The following BLAST results are available for this feature:
BLAST of FC878143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878143 ID=FC878143; Name=FC878143; organism=Citrus clementina; type=EST; length=848bpback to top |