FC878195

Overview
NameFC878195
Unique NameFC878195
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length924
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5700 contig Ccv1_Contig5700:1..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK2_TOBAC (Hexokinase-2, chloroplastic OS=Nicotiana tabacum GN=HXK2 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 1.366e-108
Identity = 204/262 (77.86%), Postives = 224/262 (85.50%), Query Frame = 3
Query:  150 VTATAMLPAVGSLCISRSPR---GGPRFTMA-VRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNAC 923
            ++ T   PA  S  ISRSP      PR  +A VRS V+++VAPILTKLQK+CATPLPVLR+VADAM  DMRAGL VDGG +LKMILSY+D LPTGNE+GLFYALDLGGTNFRVLRVQLGG+EERV ATEFEQVSIPQELM  TSEELFDFIA+ L KF++ E GKF + QGR REIGFTFSFPVKQTS+ SG+LIKWTKGF+VSGTAGKDVVACLNEAMERQGL M+VSALVNDTV TLAGARYWD DVM AVILGTGTNAC
Sbjct:    1 MSVTVSSPAGRSFHISRSPYKKISKPRVIIAAVRSGVSLAVAPILTKLQKDCATPLPVLRHVADAMAVDMRAGLAVDGGSDLKMILSYIDTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKEERVIATEFEQVSIPQELMFATSEELFDFIASELGKFSQSEGGKFEMQQGRTREIGFTFSFPVKQTSVKSGILIKWTKGFAVSGTAGKDVVACLNEAMERQGLGMQVSALVNDTVATLAGARYWDNDVMVAVILGTGTNAC 262          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK4_ORYSJ (Hexokinase-4, chloroplastic OS=Oryza sativa subsp. japonica GN=HXK4 PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 1.085e-97
Identity = 181/242 (74.79%), Postives = 203/242 (83.88%), Query Frame = 3
Query:  207 RGGPRFTMAVRSDV---NVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNAC 923
            RGG     AVR        ++APIL  L+  CA PLPVLR VADAM + MRAGL  DG GELKMI S+V +LPTGNE GLFYALDLGGTNFRVLRVQLGG+++R+  TEFEQVSIP+E+M G +E+LFDFIA+GL++F   E  KFHLPQGR+RE+GFTFSFPV QTSIDSG+LIKWTKGF+VSGTAGKDVVACLN AMERQGLDMRVSALVNDTVGTLAGARYWD+DVM AVILGTGTNAC
Sbjct:   27 RGGGSGAAAVRCSAVAPTSAIAPILADLRLRCAAPLPVLRRVADAMASGMRAGLADDGAGELKMIPSHVYSLPTGNETGLFYALDLGGTNFRVLRVQLGGKDKRIIDTEFEQVSIPREIMHGITEDLFDFIASGLSRFVATEGDKFHLPQGRKRELGFTFSFPVNQTSIDSGILIKWTKGFAVSGTAGKDVVACLNAAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNAC 268          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXKL1_ARATH (Hexokinase-like 1 protein OS=Arabidopsis thaliana GN=At1g47840 PE=2 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 6.583e-95
Identity = 181/261 (69.35%), Postives = 207/261 (79.31%), Query Frame = 3
Query:  144 MFVTATAMLPAVGSLCISRSPRGGPRFTMAVRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKE-AGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNAC 923
            +  ++  + PA+GS   S  PR       AVRS+ + S  PILTK QK+CATP P LRNVA+A+  DMR GL V+GGG+L+MIL++VDALP+GNE GLFYALDLGGTNFRV  VQLGG++ERV ATE EQ+SI Q+LM GTSEELF FIA+ LA F  KE  G+F L +GR+RE+GFTFSFPVKQTSIDSG L KWTKGF VSG  GK+VVACLNEAME  GLDMRVSALVND VGTLAGARYWDEDVM  VILGTGTNAC
Sbjct:    3 LMFSSPVVTPALGSFTFSSRPRSNYIVMSAVRSN-SASTCPILTKFQKDCATPTPYLRNVANAIADDMRDGLAVEGGGDLEMILTFVDALPSGNEEGLFYALDLGGTNFRVRSVQLGGKKERVLATESEQISISQKLMIGTSEELFGFIASKLANFVAKEKPGRFLLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAHGLDMRVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNAC 262          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK1_ARATH (Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 2.197e-82
Identity = 157/257 (61.09%), Postives = 191/257 (74.32%), Query Frame = 3
Query:  150 VTATAMLPAVGSLCISRSPRGGPRFTMAVRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            V  TA + AV  L + R  +   ++           V  IL   +++CATP+  LR VADAMT +M AGL  DGG +LKM++SYVD LP+G+E+GLFYALDLGGTNFRV+RV LGG++ERV   EFE+VSIP  LM G S+ELF+FIA  LAKF   E   FHLP+GRQRE+GFTFSFPVKQTS+ SG LIKWTKGFS+    G+DVV  LN+A+ER GLDMR++ALVNDTVGTLAG RY++ DV+ AVILGTGTNA
Sbjct:   10 VVCTAAVCAVAVLVVRRRMQSSGKWGR---------VLAILKAFEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYALDLGGTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATECEDFHLPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVGLDMRIAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNA 257          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK2_ORYSJ (Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HXK2 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.877e-79
Identity = 158/261 (60.54%), Postives = 189/261 (72.41%), Query Frame = 3
Query:  141 KMFVTATAMLPAVG-SLCISRSPRGGPRFTMAVRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            K    A A   AVG +L + R  R   R+    R+D       +L +L++ CA P   LR VADAM  +M AGL  +GG +LKMI+SYVDALP+G E+G+FYALDLGGTNFRVLRVQLGG+E RV   E +++SIP  LM G S ELFDFIA+ LAKF   E   FHL +GRQRE+GFTFSFPVKQTSI SG LI WTKGFS+  T G+DVV  L +A+ERQGLDM+V+AL+NDT+GTLAG RY D DV+ AVILGTGTNA
Sbjct:    3 KAAAAAVAAAAAVGVALLVRRQLREAKRWG---RADA------VLRELEERCAAPPGRLRQVADAMAVEMHAGLASEGGSKLKMIISYVDALPSGEEKGVFYALDLGGTNFRVLRVQLGGKEGRVIKQEHDEISIPPHLMTGGSNELFDFIASSLAKFVASEGEDFHLAEGRQRELGFTFSFPVKQTSIASGTLINWTKGFSIDETVGEDVVTELTKALERQGLDMKVTALINDTIGTLAGGRYDDNDVIAAVILGTGTNA 254          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK6_ORYSJ (Hexokinase-6 OS=Oryza sativa subsp. japonica GN=HXK6 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.513e-78
Identity = 145/220 (65.91%), Postives = 175/220 (79.55%), Query Frame = 3
Query:  261 APILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            A ++ ++++  +TP  +LR +ADAM  +M  GL  D    LKM++SYVD LPTG+E GLFYALDLGGTNFRV+RVQLGG+E+RV + ++E+V+IP  LM GTS ELFDFIA  L  F + E   FHLP+GRQRE+GFTFSFPV QTSI SG LIKWTKGFS++GT G+DVVA L+ AMERQGLDM+V+ALVNDTVGTLAG RY D DV  AVILGTGTNA
Sbjct:   46 AAVIEEVEQRFSTPTALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVIRVQLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGEDFHLPEGRQRELGFTFSFPVHQTSISSGTLIKWTKGFSINGTVGEDVVAELSRAMERQGLDMKVTALVNDTVGTLAGGRYVDNDVAAAVILGTGTNA 265          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK1_SPIOL (Hexokinase-1 OS=Spinacia oleracea GN=HXK1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.513e-78
Identity = 148/221 (66.97%), Postives = 175/221 (79.19%), Query Frame = 3
Query:  258 VAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            V  IL +L   C TPL  LR VADAMT +M AGL  +G  +LKM++SYVD LPTG+E GLFYALDLGGTNFRVLRV+LGG+E+RV   EF++VSIP ELM GTSE+LFD+IA  LAKF   E+   H    +QRE+GFTFSFPVKQTSI SG LI+WTKGF++  T G+DVVA L +AM R+G+DMRV+ALVNDTVGTLAG RY+ EDV+ AVILGTGTNA
Sbjct:   37 VMAILKELDDNCGTPLGKLRQVADAMTVEMHAGLASEGASKLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVLRVKLGGKEKRVVEQEFDEVSIPPELMVGTSEQLFDYIAEALAKFVATESEGLHPEPNKQRELGFTFSFPVKQTSIASGTLIRWTKGFNIEDTVGEDVVAELTKAMLRKGVDMRVTALVNDTVGTLAGGRYYKEDVIAAVILGTGTNA 257          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK5_ORYSJ (Hexokinase-5 OS=Oryza sativa subsp. japonica GN=HXK5 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.629e-77
Identity = 148/258 (57.36%), Postives = 186/258 (72.09%), Query Frame = 3
Query:  153 TATAMLPAVGSLCI--SRSPRGGPRFTMAVRSDVNVSVAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            TA  +  AVG   +   R  R          ++    VA ++  ++   +TP  +LR ++DAM  +M  GL  D    +KM+++YVD LPTGNE+GLFYALDLGGTNFRVLRVQLGG+E+RV   ++E+VSIP  LM GTS ELFDFIA+ L+KF + E   FHLP+GRQRE+GFTFSFPV QTSI SG LIKWTKGFS++   G+DVV+ L +AMERQGLDM+++ALVNDTVGTLAG RY D  V+ A+ILGTGTNA
Sbjct:    9 TAVVVAAAVGVAVVLARRRRRRDLELVEGAAAERKRKVAAVIEDVEHALSTPTALLRGISDAMVTEMERGLRGDSHAMVKMLITYVDNLPTGNEQGLFYALDLGGTNFRVLRVQLGGKEKRVVQQQYEEVSIPPHLMVGTSMELFDFIASALSKFVDTEGDDFHLPEGRQRELGFTFSFPVSQTSISSGTLIKWTKGFSINDAVGEDVVSELGKAMERQGLDMKIAALVNDTVGTLAGGRYADNSVVAAIILGTGTNA 266          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK2_SOLTU (Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.167e-75
Identity = 142/218 (65.14%), Postives = 174/218 (79.82%), Query Frame = 3
Query:  267 ILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            IL + +++CATP   L+ VADAMT +M AGL  +GG +LKM++SYVD LPTG+E G+FYALDLGGTNFRVLRVQLGG++  +   EF + SIP  LM GTSE LFD+IA  LAKF  +E  +FH P GRQRE+GFTFSFP+ QTSI+SG LI+WTKGFS+  T GKDVVA L +AM+++ +DMRVSALVNDTVGTLAG R+ ++DV  AVILGTGTNA
Sbjct:   40 ILKEFEEKCATPDGKLKQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEGGVFYALDLGGTNFRVLRVQLGGKDGGIIHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVAEEGEEFHPPPGRQRELGFTFSFPIMQTSINSGTLIRWTKGFSIDDTVGKDVVAELTKAMQKREIDMRVSALVNDTVGTLAGGRFTNKDVSIAVILGTGTNA 257          
BLAST of FC878195 vs. ExPASy Swiss-Prot
Match: HXK2_ARATH (Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.794e-75
Identity = 143/221 (64.71%), Postives = 167/221 (75.57%), Query Frame = 3
Query:  258 VAPILTKLQKECATPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMGAVILGTGTNA 920
            V  IL   +++CATP+  LR VADAMT +M AGL  +GG +LKM++SYVD LP+G+E G FYALDLGGTNFRV+RV LGG+ +RV   EF++ SIP  LM G S ELFDFI   LAKF   E   FHLP GRQRE+GFTFSFPVKQ S+ SG LI WTKGFS+  T  KDVV  L +AMER GLDM V+ALVNDT+GTLAG RY + DV+ AVILGTGTNA
Sbjct:   37 VIEILKAFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYALDLGGTNFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEGEDFHLPPGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVGLDMLVAALVNDTIGTLAGGRYTNPDVVVAVILGTGTNA 257          
The following BLAST results are available for this feature:
BLAST of FC878195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
HXK2_TOBAC1.366e-10877.86Hexokinase-2, chloroplastic OS=Nicotiana tabacum G... [more]
HXK4_ORYSJ1.085e-9774.79Hexokinase-4, chloroplastic OS=Oryza sativa subsp.... [more]
HXKL1_ARATH6.583e-9569.35Hexokinase-like 1 protein OS=Arabidopsis thaliana ... [more]
HXK1_ARATH2.197e-8261.09Hexokinase-1 OS=Arabidopsis thaliana GN=HXK1 PE=1 ... [more]
HXK2_ORYSJ3.877e-7960.54Hexokinase-2 OS=Oryza sativa subsp. japonica GN=HX... [more]
HXK6_ORYSJ2.513e-7865.91Hexokinase-6 OS=Oryza sativa subsp. japonica GN=HX... [more]
HXK1_SPIOL2.513e-7866.97Hexokinase-1 OS=Spinacia oleracea GN=HXK1 PE=2 SV=... [more]
HXK5_ORYSJ1.629e-7757.36Hexokinase-5 OS=Oryza sativa subsp. japonica GN=HX... [more]
HXK2_SOLTU1.167e-7565.14Hexokinase-2 OS=Solanum tuberosum GN=HXK2 PE=2 SV=... [more]
HXK2_ARATH5.794e-7564.71Hexokinase-2 OS=Arabidopsis thaliana GN=HXK2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AC01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878195 ID=FC878195; Name=FC878195; organism=Citrus clementina; type=EST; length=924bp
AAACTGTTGAAACCTTGCTATCAAGAAAAAAGTGAAACAAAAACACTACA
CACTATGCACCTCTCTGTCTGAACCTCACAATTTTCTTTACTCTTCATCT
TATTTTATTTTTCTTTCTGCTTAGATCTTACCGTCAACCGAAAATGTTCG
TTACTGCAACAGCAATGTTACCGGCCGTTGGATCCCTCTGCATCTCGCGG
TCACCCAGAGGCGGGCCTCGGTTTACGATGGCCGTAAGATCAGACGTTAA
TGTGTCAGTTGCTCCGATCTTGACAAAGCTACAGAAAGAGTGTGCAACTC
CTTTGCCCGTTCTGCGCAACGTGGCGGACGCCATGACTGCTGATATGAGA
GCTGGGCTTGTTGTTGATGGGGGTGGCGAACTCAAGATGATACTTAGCTA
TGTCGATGCTTTGCCAACTGGGAATGAGAGAGGATTGTTCTATGCATTGG
ATCTTGGAGGCACAAACTTTAGGGTGCTAAGGGTGCAATTAGGTGGGCAA
GAAGAGCGTGTTCAAGCTACAGAATTTGAACAAGTTTCTATCCCTCAAGA
GCTCATGTGTGGTACCTCTGAGGAGCTTTTTGATTTTATTGCAACTGGCC
TGGCAAAATTTGCGGAAAAGGAAGCTGGAAAATTTCACTTGCCCCAAGGG
AGGCAGAGGGAAATTGGATTTACATTTTCTTTCCCCGTGAAGCAGACATC
GATTGATTCTGGCGTACTAATTAAATGGACAAAGGGTTTCTCTGTCTCTG
GTACGGCGGGAAAGGATGTAGTTGCTTGTTTAAATGAAGCAATGGAAAGG
CAAGGATTAGATATGCGAGTGTCTGCCCTGGTTAATGATACCGTGGGCAC
ATTAGCCGGGGCTAGATACTGGGATGAAGATGTCATGGGTGCTGTCATTT
TGGGTACTGGAACCAATGCTTGCT
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