FC878209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878209 vs. ExPASy Swiss-Prot
Match: TAP46_ARATH (PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 8.189e-69 Identity = 147/282 (52.13%), Postives = 178/282 (63.12%), Query Frame = 3 Query: 84 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMXXXXXXXXXXXXQAKPTAFADQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPXXXXXXXXXXXXXXXXXXAWLTTISLAVCKVCLRF*YDFPFASF*KLPLKIILSFSIXXXXXXXXXXXXXXXXXSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAA 929 MG ++ EE+PL LFE+ RKIH A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNETK+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE M + A AD+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S P AWL++I+LA+CK + L +L SA+KERQLK GE FS LD+R+KKAE+WHRDAA Sbjct: 1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNETKEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELEASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDDIPDDDSEEEREAWLSSINLAICKA---------------IDLLEMLK--------------REEEMLSAIKERQLKDGEGGFSRDALDDRTKKAETWHRDAA 253
BLAST of FC878209 vs. ExPASy Swiss-Prot
Match: IGBP1_HUMAN (Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.046e-12 Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 105 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC-----------EIMXXXXXXXXXXXXQAKPT--AFADQRARKIARFKRQRAAESKLQEIKERKE 560 +LP LP LFE GR++ ++ATE S + V KG ++LEK +M+ +L LFS NE ++I++ +LKY+LVP F G L ++++ RL L+ ++ +++ C + M A P+ A A QR KI R+K+++ E +L +K E Sbjct: 8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180
BLAST of FC878209 vs. ExPASy Swiss-Prot
Match: YCJ5_SCHPO (Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe GN=SPCC63.05 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 43/154 (27.92%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 120 SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMXXXXXXXXXXXXQAKPTAFADQRARKIARFKRQRAAESKLQEIKERKERRGRSTR 581 SL E + ++ S D + E EKC +V +L +FSSNE D+I T+ L+Y+++ Y L + +E+ + DRL+ ++ ++ + F+S C+ KP AD R KIAR++ ++ E +L+ + + E R Sbjct: 5 SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYLMIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICD------DYGLKPMQDEKPKTEADTRTLKIARYRMRQNLEKELKALSKDSETNEEQER 152
BLAST of FC878209 vs. ExPASy Swiss-Prot
Match: IGBP1_RAT (Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 96 SREEL---PLPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC------EIMXXXXXXXXXXXXQAKPT-------AFADQRARKIARFKRQRAAESKLQEIKERKE 560 S EEL LP LFE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +LKY++VP G L ++++ RL L+ ++ F++ C E A+ + A A QR KI R+K+++ E +L +K E Sbjct: 4 SEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASIDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVAEFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181
BLAST of FC878209 vs. ExPASy Swiss-Prot
Match: IGBP1_MOUSE (Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 52/169 (30.77%), Postives = 82/169 (48.52%), Query Frame = 3 Query: 114 LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC-----------EIMXXXXXXXXXXXXQAKP--TAFADQRARKIARFKRQRAAESKLQEIKERKE 560 LP LFE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +LKY++VP G L ++++ RL L+ ++ F++ C + A P A A QR KI R+K+++ E +L +K E Sbjct: 13 LPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAENNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181 The following BLAST results are available for this feature:
BLAST of FC878209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878209 ID=FC878209; Name=FC878209; organism=Citrus clementina; type=EST; length=929bpback to top |