FC878236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 5.270e-57 Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 229 YCRRWYNPLRRK--PFDEPSPDVLRHWIDADPNPISSQ-ERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIKK 729 Y RRW NPL R+ P PS + R WID+D P+S ERF+VVSYNILGD N+ HR+LY NV Y+KW RKRLIC+ELI LNPDII MQEVD+YFD+ ++MEK GYAG YKRRTGDNVDGCAMFWKAD+F +LE+ +IEF +FG+R+NVAQL+ E +K +K Sbjct: 68 YSRRWQNPLPRRQHPDQIPSSQIARDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRK 237 HSP 2 Score: 89.7373 bits (221), Expect = 2.393e-17 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 2 Query: 605 FGKLISFGY*SKQALNLKSLAFVKMWHNFPLLRQMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 F K FG ++ + +L ++ KSR++L+GNIHVLYNPN+G+VKLGQ+ L S+A ++++KWG+IP+VL GDFN T +S +Y Sbjct: 196 FWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNQGDVKLGQVRSLCSKAHLLSKKWGDIPIVLCGDFNSTPKSPLY 293
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 2.253e-50 Identity = 67/157 (42.68%), Postives = 101/157 (64.33%), Query Frame = 1 Query: 256 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIK 726 RR+ ++ S V R W+ + N + ++ +VSYN+LG NA H DLY NV ++++W+RRK LIC+E+ N I+C+QEVDR+ D+ +++ G+ G +K RTG+ DGCA+FWK + F LL+ IEF +FG+R NVAQL E + + K Sbjct: 71 RRRTKEKISSSVEREWVFSANNFENLADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPK 227 HSP 2 Score: 80.8777 bits (198), Expect = 2.253e-50 Identity = 35/65 (53.85%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 704 QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 ++R++ RR++VGNIHVL+NP RG++KLGQ+ +A ++++WGNIPV +AGD N T QSAIY Sbjct: 231 RVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKLSQEWGNIPVAIAGDLNSTPQSAIY 295
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.744e-40 Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 256 RRKPFDEPSPDVLRHWIDADPNPISSQERFSVVSYNILGDKNAFKH-RDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFE 702 R++P +PS R W A P E+F V+SYNIL D A H R LY ++ + W RK + EL + DI+C+QEVD++ D+ M+ GY+ +K RTG+ VDGCA+FW++++F+L+ + SI+F + GLR+NVAQ+ E Sbjct: 156 RQRPRSKPSD--YREWEYAKTPPSPGSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLE 303 HSP 2 Score: 67.3958 bits (163), Expect = 1.744e-40 Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 2 Query: 722 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITLQSAIY 898 S RV++ NIHVL+NP RG+ KLGQ+ L +A V++ W + P+VL GDFN T +S +Y Sbjct: 324 SHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSPLY 382
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE1_RAT (Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.747e-22 Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 253 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 681 L+ P + P ++L R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL R+NV Sbjct: 203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361 HSP 2 Score: 47.3654 bits (111), Expect = 1.747e-22 Identity = 24/56 (42.86%), Postives = 31/56 (55.36%), Query Frame = 2 Query: 737 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITLQSAIY 898 V N HVLYNP RG+VKL Q+ L + VA + P++L GD N S +Y Sbjct: 385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLY 440
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE1_MOUSE (Protein angel homolog 1 OS=Mus musculus GN=Angel1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.747e-22 Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 253 LRRKPFDEPSPDVL-RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 681 L+ P + P ++L R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL R+NV Sbjct: 203 LQPPPMEIPYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361 HSP 2 Score: 47.3654 bits (111), Expect = 1.747e-22 Identity = 24/56 (42.86%), Postives = 31/56 (55.36%), Query Frame = 2 Query: 737 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITLQSAIY 898 V N HVLYNP RG+VKL Q+ L + VA + P++L GD N S +Y Sbjct: 385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLY 440
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE1_HUMAN (Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.155e-21 Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 1 Query: 295 RHWIDADPNPISS--------QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILN-VMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 681 R W D P + Q +F+++SYNIL + +LY + + + WN R + QE +PDI+C+QEV D Y++ L + G+ YKRRTG DGCA+ +K +FRLL + +E+ GL R+NV Sbjct: 221 REWEDFSTQPDAQGLKAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFVNLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 364 HSP 2 Score: 46.9802 bits (110), Expect = 3.155e-21 Identity = 23/56 (41.07%), Postives = 31/56 (55.36%), Query Frame = 2 Query: 737 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITLQSAIY 898 V N H+LYNP RG+VKL Q+ L + VA + P++L GD N S +Y Sbjct: 388 VANTHILYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLY 443
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE2_HUMAN (Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.426e-20 Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 307 DADPNPISSQERF--SVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 654 + DP S+ +F SV+SYNIL + LY++ R + W+ R I +E+ + D++C+QEV D Y +I +E GY YK RTG DGCA+ +K KF LL +EF Sbjct: 153 NVDPKCEDSENKFDFSVMSYNILSQDLLEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEF 273 HSP 2 Score: 48.1358 bits (113), Expect = 7.426e-20 Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 2 Query: 731 VLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVA-EKWGNI-PVVLAGDFNITLQSAIY 898 + V N H+LYNP RG++KL Q+ L + VA +K G+ P+V+ GDFN S +Y Sbjct: 304 ICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLY 361
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE2_BOVIN (Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.634e-19 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 343 FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 654 FSV+SYNIL + LY++ R + W+ R I +E+ + D++C+QEV D Y +I +E GY YK RTG DGCA+ +K KF LL +EF Sbjct: 167 FSVMSYNILSQDLLEDNSHLYKHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEF 273 HSP 2 Score: 48.1358 bits (113), Expect = 1.634e-19 Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 2 Query: 722 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVA-EKWGNI-PVVLAGDFNITLQSAIY 898 S + V N H+LYNP RG++KL Q+ L + VA +K G P+V+ GDFN S +Y Sbjct: 301 SPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGRFCPIVMCGDFNSVPGSPLY 361
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: CCR4_CRYNE (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Cryptococcus neoformans GN=CCR4 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.037e-19 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 277 PSPDVLRHWIDADPN---PISS-QERFSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEVD--RYFDILNVM-EKTGYAGCYKRRTGDN---------VDGCAMFWKADKFRLLEQTSIEFKEFGLRE 675 P P R WID + + P S QE FSV++YNIL +F Y + W+ RKRL+ +E++ + D++C+QE+D +Y D M +K GY G + R+ VDGCA FWK +KFRL+E IEF + L++ Sbjct: 363 PPPPPERQWIDLETDVDTPTSGKQESFSVLTYNILCA--SFAPATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQEIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQVIEFNQLALQK 509 HSP 2 Score: 30.8018 bits (68), Expect = 6.037e-19 Identity = 16/47 (34.04%), Postives = 25/47 (53.19%), Query Frame = 2 Query: 728 RVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGD 868 R+LV N H+ ++ +VKL QI L + + E++ PV L D Sbjct: 541 RLLVANSHIYWDHRYRDVKLVQIGMLMEELEKIVEQFSRYPVKLDTD 587
BLAST of FC878236 vs. ExPASy Swiss-Prot
Match: ANGE2_DANRE (Protein angel homolog 2 OS=Danio rerio GN=angel2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.069e-19 Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 283 PDVLRHWID------ADPNPISSQER----FSVVSYNILGDKNAFKHRDLYQNVRYEYMKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 681 P++ RHW D A P+ +++ FSV+SYNIL + LY++ + W R I +EL + DI+C+QEV D Y I +E GY +KRRTG DGCA+ +K ++F L+ +E+ G+ R+NV Sbjct: 169 PELKRHWEDLSHLCKAAPSVNRGKQKWPFDFSVMSYNILSQDLLCDNTYLYRHCNPPVLDWRNRFPNIIKELEQYSADIMCLQEVQEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNV 318 HSP 2 Score: 45.8246 bits (107), Expect = 6.069e-19 Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 2 Query: 731 VLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGN--IPVVLAGDFNITLQSAIY 898 + V N H+LYNP RG++KL Q+ L + V++ + PV+L GDFN S +Y Sbjct: 336 ICVANTHLLYNPRRGDIKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLY 393 The following BLAST results are available for this feature:
BLAST of FC878236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878236 ID=FC878236; Name=FC878236; organism=Citrus clementina; type=EST; length=899bpback to top |