FC878284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 2.944e-89 Identity = 158/198 (79.80%), Postives = 176/198 (88.89%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFXNHGHVV 878 DVI LA TLA DGRRVHVIERDL+E DRIVGELLQPGGYLKLIELGLEDCV +IDAQRVFGYAL+ DG T++SYPLEKFHSDVAGR FHNGRFVQR+REKAASLPNVR+EQGTVTSL+E+KG++KGVQYKTK G+EL+A+APLTIVCDGCFSNLRRSLCNPKV+VPSCFVGL+LEN +LP NHGHV+ Sbjct: 76 DVIIVGAGVAGSALAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQELSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVI 273
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 4.146e-59 Identity = 117/191 (61.26%), Postives = 139/191 (72.77%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK--FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNL 851 DVI LA LAKDGRRVHVIERDL EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDG S+P++ F D + R FHNGRFVQRLR+KA+SLPNVRLE+GTV SL+EEKG IKGV YK AGEE TA APLT+VCDGC+SNLRRSL + +V S VG + +NC L Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQL 237
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.021e-57 Identity = 118/213 (55.40%), Postives = 146/213 (68.54%), Query Frame = 3 Query: 216 DNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNL 851 +N + K P A DADVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG + +S+P + F + GR F+NGRFVQRLR+KA+SLP V+LE+GTV SL+EEKG IKGV YK AGEE TA+APLT+VCDGC+SNLRRS+ + +V S VG V +NC L Sbjct: 26 NNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAFAPLTVVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQL 238
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.742e-57 Identity = 112/199 (56.28%), Postives = 143/199 (71.86%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLE-KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFXNHGHVV 878 DVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+E+IDAQ+ G LFKDG T +P++ F + +GR FHNGRFVQRLR+KA+SLPNVRLE+GTV SL+EEKG +KGV YK +GEE T++APLT+VCDGC SNLRRSL + +V + +G + NC L + H++ Sbjct: 50 DVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETTSFAPLTVVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLI 248
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.604e-56 Identity = 112/202 (55.45%), Postives = 140/202 (69.31%), Query Frame = 3 Query: 282 ADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK--FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNP-KVDVPSCFVGLVLENCNLPFXNHGHVV 878 ADVI LA LAKDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E IDAQ+ G A++KDG +P++ F + + R FHNGRFVQ+LR KA SL NVRLE+GTV SLLEEKG +KGV YK K GEE TA APLT+VCDGC+SNLRRSL + ++ S VG + +NC L H++ Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETTALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLI 247
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.946e-54 Identity = 110/199 (55.28%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFXNHGHVV 878 DVI LA LAKDGRRVHVIERDL EP R +GEL+Q GG L +LGLEDC+E IDAQ A++KDG + +P +K F + GR NGR VQRLR+KAASL NV+LE+GTV SL+EE+G +KGV YK AGEE+TA+APLT+VCDGC+SNLRRSL + +V S VG V +N L + H++ Sbjct: 45 DVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLI 243
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 8.685e-41 Identity = 94/203 (46.31%), Postives = 124/203 (61.08%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFXNHGHVV 878 D +VI L L++DGR+V VIERDL EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + +++ QI YPL + + +GR FH+GRF+ LR+ A + PN + +G V LLEE + GVQYK K G+ +APLT+V DG FS R+SL + KV V S FVG +++N NH ++ Sbjct: 123 DPEVIIVGAGVLGSALVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELI 325
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.300e-40 Identity = 91/191 (47.64%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLEN 842 D +VI LA L++DGR+V VIERDL EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ + QI YPL + + +G FH+GRF+ LR+ A + PNV+ +G V LLEE + GVQYK K G+ +APLT+V DG FS R+SL + KV V S FVG ++++ Sbjct: 121 DPEVIIVGSGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKSLISSKVSVSSHFVGFLMKD 311
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39 Identity = 91/217 (41.94%), Postives = 130/217 (59.91%), Query Frame = 3 Query: 201 RSKSEDNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLEN 842 R + E N +++ T+++ D +VI LA L++DGR V VIERDL EPDRI+GE LQPGGY L ELGL D VE ++A + GY + +R+ QI YP+ + + +G FH+G+F+ LR+ A + PNV+ +G V LLEE + GVQYK K G+ +APLT+V DG FS R++L + KV V S FVG ++++ Sbjct: 96 RRRKEVNLSETTLTGAATSVSTSSVTDPEVIIIGSGVLGSALATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKNLISNKVSVSSHFVGFIMKD 312
BLAST of FC878284 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.461e-37 Identity = 87/203 (42.86%), Postives = 113/203 (55.67%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEK--GTIKGVQYKTKAGEELTAY-APLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFXNHGHVV 878 DAD+I L L + GR+V V+ERD+SEPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G GFH GRFV LR+ S PNV + + TV LL ++ I GV +K E Y APLTIVCDGCFS R++ + + V F+GL+L N + GHV+ Sbjct: 5 DADIIIIGAGITGCALGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKAPLTIVCDGCFSKFRKAFIDHPIQVTDHFLGLILTNPDYIAPGRGHVI 207 The following BLAST results are available for this feature:
BLAST of FC878284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878284 ID=FC878284; Name=FC878284; organism=Citrus clementina; type=EST; length=879bpback to top |