FC878287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.777e-61 Identity = 138/284 (48.59%), Postives = 180/284 (63.38%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS--KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ +KL +LV++RPTAVN++ AA L ++ ++ A + +V + I E ML+ D+ N++IG GA L ++ S K +VLTHCNTG+LATAGYGTALGVIR+LHS G LE A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H I FYVAAP +S Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHAFCTETRPYNQGARLTAFELVYEQIPATLITDSMVAAAMAHRGVSAVVVGADRVVANGDTANKVGTYQLAIVAKHHGIPFYVAAPSSS 284
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.351e-60 Identity = 135/286 (47.20%), Postives = 177/286 (61.89%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLG---NKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATA-SEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ S T D SF+ L +LV +RPTAVN+ AA +L ++K A A + + ++ I+ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH G L +C+ETRP+NQGSRLTA+ELV+++IP ++D +V+AV+VGADRV ANGDT NKIGTY LA+ A++H I FYVAAP TS Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELT-----SRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGLAESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHVLGRLSHVFCTETRPYNQGSRLTAYELVYEKIPATLITDSMASAAIRDRKVTAVVVGADRVVANGDTANKIGTYQLAITARYHGIPFYVAAPSTS 282
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.840e-60 Identity = 136/284 (47.89%), Postives = 178/284 (62.68%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ + L +LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML D+ N++IG GA L + + K +VLTHCNTG+LATAGYGTALGVIR+LH+ G LE A+C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NK+GTY LA+ AK H I FYVAAP +S Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAVRERVICWAEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLEHAFCTETRPYNQGARLTAFELVYEQIPATLIADSMAAAAMAHQGVSAVVVGADRVVANGDTANKVGTYQLAIAAKHHGIPFYVAAPSSS 284
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.167e-59 Identity = 130/283 (45.94%), Postives = 176/283 (62.19%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAA-ATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ +F+ L +LVS+RPTAVN+ AA +L +++ A + + + ++ ++ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH+ G L +C+ETRP+NQGSRLTA+ELV+++IP M++ +V+AV+VGADRV ANGDT NKIGTY LA+ AK+H I FYVAAP TS Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELTTKPCQD--VPSLITFVRESLHHLVSARPTAVNMKKAADELNAFLAEEADKPGATSQRLTESVVQWAESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLHALGRLSHVFCTETRPYNQGSRLTAYELVYEKIPATLITDSMASVTMRERKVTAVVVGADRVVANGDTANKIGTYQLAIIAKYHGIPFYVAAPSTS 282
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 8.361e-58 Identity = 134/284 (47.18%), Postives = 174/284 (61.27%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 +L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ ++L LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H + FYVAAP +S Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAVELRAGAGGPGLAALVA-FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEQIPATLITDSMAAAAMAHRGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGVPFYVAAPSSS 284
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.426e-57 Identity = 135/283 (47.70%), Postives = 172/283 (60.78%), Query Frame = 1 Query: 76 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTS 915 L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ ++L LV++RPTAVN++ AA L + ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH G LE +C+ETRP+NQG+RLTAFELV+++IP M VSAV+VGADRV ANGDT NKIGTY LA+ AK H I FYVAAP +S Sbjct: 3 LEAIRYSPGSLQILDQLQLPEHCHYETLSSVQQAREAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDQLSLLVAARPTAVNMARAARDLTHMAAREAELEGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHTFCTETRPYNQGARLTAFELVYEKIPATLITDSMAAAAMVHQGVSAVVVGADRVVANGDTANKIGTYQLAIVAKHHGIPFYVAAPSSS 284
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_SCHPO (Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe GN=mri1 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 9.244e-57 Identity = 130/283 (45.94%), Postives = 168/283 (59.36%), Query Frame = 1 Query: 73 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS-KFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 SLQ+I Y L +LDQ LP E Y+ + + D ++ I++M VRG V + +L+ ADA ++ N E+L SRPTAVNL + A ++ I E + I+ AE ML D+ N IG+ G FL K+ K +VLTHCNTGSLAT+GYGTALG+IR+LH G LE AYC+ETRP+NQGSRLTAFELVHD+IP +M ++ A++VGADRV NGDT NKIGTY+LA+ AK F VAAP +SI Sbjct: 2 SLQAIIYNEDKLLVLDQLLLPYERKYISVSNVEDAFAVIKKMQVRGAPAIAIVAALSVAVGLKHLSE----DADAKEYVINSFEHLKQSRPTAVNLFETAKFMQGI------ALQEGKNCRNKIIQEAERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLHESGNLEHAYCTETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMH--KIDAIVVGADRVTRNGDTANKIGTYNLAILAKHFGKPFIVAAPFSSI 272
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.249e-53 Identity = 128/284 (45.07%), Postives = 173/284 (60.92%), Query Frame = 1 Query: 70 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEA-AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 ++++++ + SL+LLDQR+LP ET+YL+I D AIREMVVRG + L A + DA L LE L +SRPTAVNL A A++K +I + A A +EA A + +DD+A N+ +G GA+ L + +VLTHCNTGSLAT GYGTALGVIR+ + + +++ Y ETRP+ QG+RLTA+ELV D IP LM+ GRV V+VGADR+AANGDT NKIGTY+LA+ A+ H + F V AP ++I Sbjct: 9 DTVRAVLWDGTSLKLLDQRRLPRETVYLDIPDVGAAADAIREMVVRGAPAIGITAAYGVVLAARRLPADTPDWLDA---LTPDLERLAASRPTAVNLFWALARMKSVIGQVGAD-------LPARLEAEARRIHEDDLADNRRMGELGAA-----LMDPAEAVLTHCNTGSLATGGYGTALGVIRSAYGQQRIKKVYADETRPWLQGARLTAWELVQDGIPVDLICEGAAASLMRSGRVGWVVVGADRIAANGDTANKIGTYALAVLARHHGVRFMVVAPTSTI 277
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_ALCBS (Methylthioribose-1-phosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mtnA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.762e-50 Identity = 121/271 (44.65%), Postives = 162/271 (59.78%), Query Frame = 1 Query: 106 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 LQLLDQR LP ET++L+I DS AIR MVVRG +E G A + L N + L SRPTAVNL A +L+ A + ++ QA E AE + ++D+A N+A+G +GA L S +V THCNTG+LAT G+GTALG+IR+ + L + ETRP+ QGSRLT++EL++D IP LM+ G++ AVIVGADR+ ANGDT NKIGTY+LA+ A+ HNI F VAAP++++ Sbjct: 15 LQLLDQRCLPTETLWLDICDSQQAADAIRNMVVRGAPAIGITAAYGLALEA----QIMGNDASWVT-LQNAVATLADSRPTAVNLFWALERLQRY-----AGDLQGKALAQALAEDAEAIHREDLAANQAMGEFGADLLP-----SGATVYTHCNTGALATGGHGTALGIIRSAWARNQLTGVFAGETRPWLQGSRLTSWELLNDGIPVTLVADSCAGQLMQQGKIQAVIVGADRITANGDTANKIGTYNLAVLAQHHNIPFIVAAPVSTL 270
BLAST of FC878287 vs. ExPASy Swiss-Prot
Match: MTNA_ALHEH (Methylthioribose-1-phosphate isomerase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.913e-50 Identity = 124/285 (43.51%), Postives = 168/285 (58.95%), Query Frame = 1 Query: 67 NNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGNKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIML-KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTTNKIGTYSLALCAKFHNILFYVAAPLTSI 918 N++++++ ++ L+LLDQR+LP ET++L+ +AD AIR+MVVRG V + A + AD + + L L S+RPTAVNL A ++++++ A A +EAA + + +DD+ N+ +G GA + + VLTHCNTGSLAT GYGTALGVIR+ S L Y ETRP+ QG+RLTA+ELV D IP LM+ GRV VIVGADRVAANGDT NKIGTY+LAL K H + F V AP ++I Sbjct: 4 NDTVRALDWQGDHLKLLDQRRLPAETVWLDCHSAADTADAIRDMVVRGAPAIGIAAAYG--VVLAARAAMARRPADWPAAMAADLARLRSARPTAVNLFWALDRMQQVVDSDPADPLAA-------LEAAAVAIHEDDLTANRRMGELGAHLIP-----AGAGVLTHCNTGSLATGGYGTALGVIRSAWSGKGLSAVYADETRPWLQGARLTAWELVADGIPVRLIAEGAAPLLMQRGRVDWVIVGADRVAANGDTANKIGTYALALACKAHGVKFMVVAPSSTI 274 The following BLAST results are available for this feature:
BLAST of FC878287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878287 ID=FC878287; Name=FC878287; organism=Citrus clementina; type=EST; length=920bpback to top |