FC878339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878339 vs. ExPASy Swiss-Prot
Match: MTG1_MOUSE (Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.908e-31 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 564 LEKTKRATVGPLPGVTQDIAG-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLNTRG 803 L K A VG PG+T+ + ++ RP +++LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN G Sbjct: 167 LRTGKAARVGGEPGITRAVTSRIQVCERPLVFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNRHG 247 HSP 2 Score: 77.411 bits (189), Expect = 1.908e-31 Identity = 50/141 (35.46%), Postives = 68/141 (48.23%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTLLVMVVGVPNVGKSALINSIHQ 544 WFPGHMA + ++ LK D VIEV D+RIP S +P Q L K ++ LNK DLA+ K V+ F +C +D + + + P +MVVGVPNVGKS+LINS+ + Sbjct: 29 WFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLADLTEQQKIVQRLEEKGLSNVLFTNCVKD-----ENIKQIVPKVMELIRCSYRYHRAETPEYCIMVVGVPNVGKSSLINSLRR 164
BLAST of FC878339 vs. ExPASy Swiss-Prot
Match: MTG1_HUMAN (Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.211e-31 Identity = 50/143 (34.97%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTL--LVMVVGVPNVGKSALINSIHQ 544 WFPGHMA + ++ LK+ D +IEV D+RIPLS +P Q L K ++ LNK DLA+ K ++H F +C +D R+ L +MV+GVPNVGKS+LINS+ + Sbjct: 30 WFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKD-------ENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRR 165 HSP 2 Score: 77.7962 bits (190), Expect = 4.211e-31 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 564 LEKTKRATVGPLPGVTQDIAG-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 794 L K K VG PG+T+ + +++ RP +++LDTPGVL P I +ETGLKLAL G++ D +VGEE +A YLL LN Sbjct: 168 LRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLN 245
BLAST of FC878339 vs. ExPASy Swiss-Prot
Match: MTG1_BOVIN (Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 4.212e-31 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 564 LEKTKRATVGPLPGVTQDIAG-FKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 794 L K K VG PG+T+ + ++ RP +++LDTPGVL P IP +ETGLKLAL G++ D +VGEE +A +LL LN Sbjct: 168 LRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLN 245 HSP 2 Score: 76.6406 bits (187), Expect = 4.212e-31 Identity = 46/141 (32.62%), Postives = 69/141 (48.94%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRH----------FDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISREPTLLVMVVGVPNVGKSALINSIHQ 544 WFPGHMA + ++ L++ D +IEV D++IPLS +P Q L K ++ LNK DLA+ K ++H F +C +D + + +MV+GVPNVGKS+LINS+ + Sbjct: 30 WFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLADLKEQQKIIQHLEREGIKHVVFTNCVKD-----ENVKQVIPTVTELVGSSYRYHRGEHVEYCIMVIGVPNVGKSSLINSLRR 165
BLAST of FC878339 vs. ExPASy Swiss-Prot
Match: RBGA_BACSU (Ribosome biogenesis GTPase A OS=Bacillus subtilis GN=rbgA PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.737e-25 Identity = 46/138 (33.33%), Postives = 73/138 (52.90%), Query Frame = 2 Query: 146 INWFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANPNILNKWVRHFDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXXISR-------EPTLLVMVVGVPNVGKSALINSI 538 I WFPGHMA A R + +LK+ D+V E+ D+RIP+SS +P ++ L K R++ LNK D A+ + +W HF++ ++IN+ + R + +++G+PNVGKS LIN + Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRL 140 HSP 2 Score: 49.6766 bits (117), Expect = 1.737e-25 Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 3 Query: 564 LEKTKRATVGPLPGVTQDIAGFKIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVL 791 L K A G PG+T K+ + +LDTPG+L P D GL+LA++G+IKDS++ + +A + L L Sbjct: 140 LAKKNIAKTGDRPGITTSQQWVKVGKE--LELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
BLAST of FC878339 vs. ExPASy Swiss-Prot
Match: MTG1_SCHPO (Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe GN=mtg1 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.267e-21 Identity = 41/156 (26.28%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 152 WFPGHMAAATRAIKHRLKISDLVIEVRDSRIPLSSAHPGLQPQLSAKRRVIALNKKDLANP-------------NILNK------WVRHFDSCKQDCIAINAHSRSSXXXXXXXXXXXXXXX-ISREPTLLVMVVGVPNVGKSALINSIHQIALSR 559 W+PGHM + +K+ +D+ +EVRD+RIPL+S + ++ L+ K R+I NK DLA+ N+ + W + + ++ S++ S + V VG+PN GKS+++NS+ +AL + Sbjct: 17 WYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDFLNKKNRIIVYNKCDLADTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVGMPNTGKSSILNSLRNVALRK 172 HSP 2 Score: 61.2326 bits (147), Expect = 2.267e-21 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 558 VFLEKTKRATVGPLPGVTQDIAGF-KIAHRPSIYVLDTPGVLVPSIPDIETGLKLALSGSIKDSVVGEERIAQYLLAVLN 794 V L K+K A VG PGVT+ I+ ++ + +Y+LDTPG++ PSI E LKL+L G +K+ +V + YLL LN Sbjct: 168 VALRKSKSAIVGNYPGVTKRISEIVRLFNDMDVYMLDTPGIMTPSITKPEDMLKLSLVGCVKEGIVHPVTVVDYLLFHLN 247 The following BLAST results are available for this feature:
BLAST of FC878339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878339 ID=FC878339; Name=FC878339; organism=Citrus clementina; type=EST; length=837bpback to top |