FC878348

Overview
NameFC878348
Unique NameFC878348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12330 contig Ccv1_Contig12330:30..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878348 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3)

HSP 1 Score: 215.312 bits (547), Expect = 2.893e-55
Identity = 105/143 (73.43%), Postives = 122/143 (85.31%), Query Frame = 1
Query:  331 QPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVPKPL 759
            Q ++LVVGYALTSKKKKSFLQPKLE+LAR KGI FVAID NRPLS+QGPFDVVLHKL G EW E+IEDY+QKHPEVT+LDPP +I+ ++NRQSMLQ +ADL LSDC+G + VP+QMV+ KDS +  D V EAGLK PLV KPL
Sbjct:   77 QQQKLVVGYALTSKKKKSFLQPKLELLARRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIEDYQQKHPEVTVLDPPGSIQRIYNRQSMLQGMADLKLSDCSGSLFVPKQMVVLKDSAASADAVVEAGLKFPLVAKPL 219          
BLAST of FC878348 vs. ExPASy Swiss-Prot
Match: ITPK2_ARATH (Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.292e-52
Identity = 101/139 (72.66%), Postives = 118/139 (84.89%), Query Frame = 1
Query:  343 LVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVPKPL 759
            ++VGYALTSKK KSFLQPKLE LARNKGI FVAIDQN+PLS+QGPFD+VLHK  G EW  I+E++R  HP+VT+LDPPDAI HL NRQSMLQ VAD+NLSD NG+V VP+Q+VI KD+ SIP+ V  AGL+LPLV KPL
Sbjct:   41 IIVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAVNNAGLRLPLVAKPL 179          
BLAST of FC878348 vs. ExPASy Swiss-Prot
Match: ITPK1_MAIZE (Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.142e-28
Identity = 64/148 (43.24%), Postives = 97/148 (65.54%), Query Frame = 1
Query:  319 SGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADL-NLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVPKPL 759
            SGV  P R V+GYAL  KK++SF+QP L   A ++G+  V +D ++PL++QGPF +++HKL G +W   +  +  +HP V I+DPP AI  LHNR SMLQ V++L + +D +    +P Q+V+  D+ ++ D    A L+ PL+ KPL
Sbjct:   11 SGVTHPPRYVIGYALAPKKQQSFIQPSLVAQAASRGMDLVPVDASQPLAEQGPFHLLIHKLYGDDWRAQLVAFAARHPAVPIVDPPHAIDRLHNRISMLQVVSELDHAADQDSTFGIPSQVVV-YDAAALADFGLLAALRFPLIAKPL 157          
BLAST of FC878348 vs. ExPASy Swiss-Prot
Match: ITPK1_ARATH (Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.093e-21
Identity = 58/143 (40.56%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  337 ERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLN--LSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVPKPL 759
            ER +VGYAL +KK+ SF+QP L   +R +GI  V +D  + L +QG  D ++HKL  + W E + ++R+K P V ++D P+AI+ LHNR SML+ +  L   +SD + +  VP Q+V+  DS  +        LK P++ KPL
Sbjct:    7 ERYLVGYALAAKKQHSFIQPSLIEHSRQRGIDLVKLDPTKSLLEQGKLDCIIHKLYDVYWKENLHEFREKCPGVPVIDLPEAIERLHNRVSMLEVITQLRFPVSD-SERFGVPEQVVV-MDSSVLSGGGALGELKFPVIAKPL 147          
BLAST of FC878348 vs. ExPASy Swiss-Prot
Match: ITPK1_DANRE (Inositol-tetrakisphosphate 1-kinase OS=Danio rerio GN=itpk1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.747e-12
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  349 VGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLS------------GMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVI-TKDSLSIPDQVFEAGLKLPLVPKP 756
            VGY L+ KK K         L R +GI  + +D ++P+  QGPFDV++HKL+             +   + ++DY   HPE  ILDP  AI+ L +R    + +  L  S  + ++  P  MV+ T+      +Q+ + G+  P + KP
Sbjct:   10 VGYWLSEKKIKKLNFQTFVDLCRKQGIEMIQLDLSQPIESQGPFDVIIHKLTDHIVDADQNVTESLLLVQGVQDYIDAHPETVILDPLPAIRTLLDRCKSYKLIHKLEHSMEDDRICSPPFMVLKTECGFETLEQLHKHGITFPFICKP 158          
The following BLAST results are available for this feature:
BLAST of FC878348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ITPK3_ARATH2.893e-5573.43Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidops... [more]
ITPK2_ARATH2.292e-5272.66Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidops... [more]
ITPK1_MAIZE5.142e-2843.24Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays ... [more]
ITPK1_ARATH2.093e-2140.56Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidops... [more]
ITPK1_DANRE6.747e-1230.87Inositol-tetrakisphosphate 1-kinase OS=Danio rerio... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ7YA20RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ7YA20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878348 ID=FC878348; Name=FC878348; organism=Citrus clementina; type=EST; length=761bp
AAAACTCAAGATAACAAACACTCTCTCTTCCTTACTGCGCAAAAACCGAA
TATTGAATATTACTTAGCAAAATCCCACTCGAAAATTTTATAAATTCTGC
ATATATAGACCCACAATCCGTGTCTCTATACGTATTTTCTTCTCATATAA
GTGGGCTAACAAAAAGATTAGAATCAATCTTTCTCATATAAGCATAGAAG
GAGAAAGATTGATTCTTGATTGAGTGATTAGGGTGTTTGGATAAGGAAAA
CAAGTGGCATGAGGTTGAACGGGGAAATTTCTCACAAGGAAGACGAAGAA
CATGAAGAAGAGAAACAGAGTGGGGTTTTACAGCCAGAGAGGCTGGTTGT
TGGTTATGCTTTGACTTCCAAGAAGAAAAAAAGTTTCTTGCAACCAAAGC
TTGAAATTTTAGCTCGAAATAAGGGAATAAGTTTTGTTGCCATTGATCAG
AACAGGCCACTGTCAGATCAAGGGCCTTTTGATGTTGTCTTGCACAAGTT
GTCAGGAATGGAGTGGTGCGAGATCATTGAGGATTACAGGCAGAAACATC
CAGAAGTTACCATCCTTGATCCACCAGATGCAATTAAACATCTACACAAT
CGACAGTCCATGCTTCAGGATGTGGCAGATCTTAACTTGTCTGACTGCAA
TGGCAAGGTTCGTGTTCCTAGGCAAATGGTCATAACAAAAGATTCATTAT
CAATCCCTGATCAAGTTTTTGAAGCTGGTCTAAAATTGCCACTTGTCCCA
AAGCCTCTTGT
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