FC878350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.591e-15 Identity = 52/192 (27.08%), Postives = 93/192 (48.44%), Query Frame = 2 Query: 290 EKKQTYPAAHSMAQPTQPDPFLEVCRDSDAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECLQIMYSDLYPN-GSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINL 862 EK Q+ P + + D +L + +A +WW++ FH TA+VG +L+LPY LGWG G T + + +TFY+ + M ++ H G+R R+ EL G + V+ Q + GV I ++ G+ L+ ++ L + +++ +I + + VL+ L FNS+ ++L Sbjct: 2 EKSQSSPTKDASTKQKNVDDWLPITSSRNA----------KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYTLWQMVQM--HEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVYMVTGGKSLKKIHDLLCTDCKNIRTTYWIMIFASIHFVLAHLPNFNSISIVSL 181
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL3_ARATH (Lysine histidine transporter-like 3 OS=Arabidopsis thaliana GN=At1g61270 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.125e-15 Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 413 WWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECL----QIMYSDLYPNGSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINLV 865 W+++ FH TAIVG +L LPY LGWG G L + +T Y+++ M ++ + E G+R R+ EL G Y V+ +Q + T I ++ GE L Q+ D Y LK+ FI + VLS L+ FNS+ ++LV Sbjct: 38 WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTFWQMIEMHEMFE--GKRFDRYHELGQAAFGKKLGLYIVVPLQLLVETSACIVYMVTGGESLKKIHQLSVGD-YECRKLKVRHFILIFASSQFVLSLLKNFNSISGVSLV 189
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHT1_ARATH (Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14 Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 410 EWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECL----QIMYSDLYPNGSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINL 862 +WW++ FH TA+VG +L LPY LGWG G L + +T Y+ + M ++ H G+R R+ EL G Y V+ Q + GV I ++ G+ L +++ D P +KL FI + V VLS L FNS+ ++L Sbjct: 37 KWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVLSWVITLYTLWQMVEM--HEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEIGVCIVYMVTGGKSLKKFHELVCDDCKP---IKLTYFIMIFASVHFVLSHLPNFNSISGVSL 186
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana GN=LHT2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13 Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 2 Query: 410 EWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECLQIMYSDLYPN-GSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINL 862 +WW++ FH TA+VG +L+LPY LGWG G T + + +T Y+ + M ++ H G+R R+ EL G + V+ Q + GV I ++ G L+ ++ + P+ ++ +I + V V+S L FNS+ I+L Sbjct: 32 KWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMVMSWIITLYTLWQMVEM--HEIVPGKRLDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVYMVTGGASLKKVHQLVCPDCKEIRTTFWIMIFASVHFVISHLPNFNSISIISL 181
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL4_ARATH (Lysine histidine transporter-like 4 OS=Arabidopsis thaliana GN=At3g01760 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13 Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 413 WWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECLQIMYSDLYPNG----SLKLYEFIAMVTVVMIVLSQLQPFNSLRHINLV 865 W+++ FH TAIVG +L LPY LGWG G L + +T Y+ + M ++ + E G+R R+ EL G Y ++ +Q + V I ++ G+ L+ ++ +G L++ FI + VLS L+ FNS+ ++LV Sbjct: 36 WYYSAFHNVTAIVGAGVLGLPYAMSELGWGPGVVVLILSWVITLYTLWQMIEMHEMFE--GQRFDRYHELGQAAFGKKLGLYIIVPLQLLVEISVCIVYMVTGGKSLKNVHDLALGDGDKCTKLRIQHFILIFASSQFVLSLLKNFNSISGVSLV 188
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL1_ARATH (Lysine histidine transporter-like 1 OS=Arabidopsis thaliana GN=At1g48640 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.574e-13 Identity = 52/175 (29.71%), Postives = 81/175 (46.29%), Query Frame = 2 Query: 353 LEVCRDSDAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECL----QIMYSDLYPNGSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINLV 865 LE ++ D +WW++ FH TA+VG +L LP+ LGWG G L + +T Y+ + M ++ H G+R R+ EL G Y ++ Q + GV I ++ G+ L +I D P ++L FI + VLS L FNS+ ++LV Sbjct: 25 LERQKEIDDWLPITSSRNAKWWYSTFHNVTAMVGAGVLGLPFFMAQLGWGPGIAVLILSWIITLYTLWQMVEM--HEMVPGKRFDRYHELGQFAFGERLGLYIIVPQQIIVEVGVCIVYMVTGGQSLKKFHEIACQDCSP---IRLSFFIMIFASSHFVLSHLPNFNSISGVSLV 194
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL5_ARATH (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana GN=At1g71680 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12 Identity = 44/155 (28.39%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 404 KGEWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECLQIMYSDLYPN-GSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINLV 865 + +W+++ FH TA+VG +L LP+ LGWG G + + +TFYS + M ++ H G+R R+ EL + G ++ V+ Q + I + G+ L+ L+PN ++ +I + +VLSQ FNS++ ++L+ Sbjct: 36 EAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWGPGLVAIIMSWAITFYSLWQMVQL--HEAVPGKRLDRYPELGQEAFGPKLGYWIVMPQQLLVQIASDIVYNVTGGKSLKKFVELLFPNLEHIRQTYYILGFAALQLVLSQSPDFNSIKIVSLL 188
BLAST of FC878350 vs. ExPASy Swiss-Prot
Match: LHTL8_ARATH (Lysine histidine transporter-like 8 OS=Arabidopsis thaliana GN=AATL1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.153e-11 Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 2 Query: 374 DAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYVFRGLGWGLGFTCLTVMGFVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECL----QIMYSDLYPNGSLKLYEFIAMVTVVMIVLSQLQPFNSLRHINLV 865 DA G +A FH A VG L LP F LGW G LT+ Y+ +++ ++ H G+R+ R+ ELA G + +F ++ G IL+ GE + QI+ L + L E+ + T + IVLSQL NS+ ++L+ Sbjct: 85 DAWLPITESRNGNAHYAAFHNLNAGVGFQALVLPVAFAFLGWSWGILSLTIAYCWQLYTLWILVQL--HEAVPGKRYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMKLFFQIVCGPLCTSNPLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLI 250 The following BLAST results are available for this feature:
BLAST of FC878350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878350 ID=FC878350; Name=FC878350; organism=Citrus clementina; type=EST; length=865bpback to top |