FC878351

Overview
NameFC878351
Unique NameFC878351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8083 contig Ccv1_Contig8083:20..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.995e-43
Identity = 95/248 (38.31%), Postives = 137/248 (55.24%), Query Frame = 1
Query:   58 ATIMSLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL-RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            +++  + + DR+  +K FDE+            T IP  F  PPATL   +P S +      +PTIDL G  +D + R ++VEKI  A+ + GFFQV+NHGI ++VLE+M+  I+ FHEQ  E+K   Y R+    + Y SN DLF S AA+WRDTL        P  E++P  C +  +E++  V +                T+ LK+       +++GHYYP CPQPDLT+G+T H+D   LTIL
Sbjct:    3 SSLPQVAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSS---DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTIL 247          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.182e-42
Identity = 86/241 (35.68%), Postives = 132/241 (54.77%), Query Frame = 1
Query:   82 YDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            +DRA E+K FDE+            + +PR F HP   L+  +P          +PTIDL G D  D   R   +E+I  A+ + GFFQV+NHG+ +E+LE+M + ++ FHEQ  E++   Y R+ ++   Y+SN DLF S AA+WRDT    +    P+ +++PEICR   +E++  V                 + + L +    +G +M+ HYYP CP+PDLT+G + H+D   LT+L
Sbjct:   10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVL 250          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.155e-41
Identity = 89/242 (36.78%), Postives = 131/242 (54.13%), Query Frame = 1
Query:   79 SYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            S+DRA E+K FDE+            + IPR F H    LA+ +P          +PTIDL G D  D       +E I  A+ + GFFQV+NHG+ +E+LE+M   ++ FHEQPPE++  +Y R+  +   Y+SN DL+ + AA+WRDT    +    PE +++PEICR   +E++  V                   + LK+   L+G  M+ HY+P CP+PDLT G + H+D   LT+L
Sbjct:    9 SFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVL 250          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.969e-41
Identity = 89/242 (36.78%), Postives = 135/242 (55.79%), Query Frame = 1
Query:   76 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGV-DSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            E+YDRA E+K FDE             T +PR F +P   +A+ +P S       ++PTIDL GV +S  +R ++V K+  A  + GFFQ +NHG+ ++V+E+M+  I+ FH+Q PE++   Y R+ TK + Y SN DL+ S AASWRDTL   +    P+ +++PE+C +  +E++  V +                 + LKE    +G  M+ H +P CP+P+ T G   HTD   LTIL
Sbjct:    3 ENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVV----MIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTIL 240          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.851e-40
Identity = 91/246 (36.99%), Postives = 139/246 (56.50%), Query Frame = 1
Query:   70 SLESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDV-VPTIDLSGVDSD-DLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRREN-TKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            +L   +  +E+K FDE+            T IPR FI  P  L  +   S  R  SD+ +P I+L+G+ S+ ++R  IVEKI  AS + GFFQ+VNHGI  +V+++MV  ++ FHEQ  +IK   Y R+   K   Y SN  L    A +WRDT++  +   +P+ +E P++CR   ++++++V+                K + L+E    EG +++GHYYP CPQP+LT G + H+D G LTIL
Sbjct:   35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRI---SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTIL 277          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.550e-36
Identity = 88/244 (36.07%), Postives = 126/244 (51.64%), Query Frame = 1
Query:   76 ESYDRAKEVKRFDESXXXXXXXXXXXXTAIPRFFIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDLR-PTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSK--AASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            ESYD+  E+K FD++            T +P+ F+ PP      + ++K      V P IDL G+D D ++   IV+K+  AS + GFFQVVNHGI   VL+R ++  + F EQ  E+K   Y R+  K V Y SN+DL+ S   AASWRDT+   +    P L+E P  C +  ++++  VK+                   LK+           +YYP CPQP+LT+G   HTD G +TIL
Sbjct:    8 ESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPP------KDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTIL 245          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 1
Query:  202 DLRPKSKTRPVSDVVPTIDLSGVDS-DDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            D RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  M R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + PE   K   E++  +                 + + L        + +V +YYP CPQPDLT+G+  HTDPG +T+L
Sbjct:   24 DERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLL 226          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.740e-16
Identity = 60/207 (28.99%), Postives = 90/207 (43.48%), Query Frame = 1
Query:  202 DLRPKSKTRPVSDVVPTIDLSGVDS-DDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEP-------ELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            D RPK      SD +P I L+G+D  D  R  I  +I  A    G FQVV+HG+   ++  M R  + F   PPE K         KG   +S+    H +  + +D  +I    + P          + P+   K   E++  +                 + + L        + +V +YYP CPQPDLT+G+  HTDPG +T+L
Sbjct:   23 DERPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSS----HLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLL 225          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.740e-16
Identity = 60/203 (29.56%), Postives = 91/203 (44.83%), Query Frame = 1
Query:  202 DLRPKSKTRPVSDVVPTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPE----LEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            D RPK      S+ +P I L+G+D +  R  I  KI  A  + G FQVV+HG+G +++  M R  + F   P E K         KG  +I +  L       WR+ +      T         + PE   K   E+++ +                 + + L +      + +V +YYP CPQPDLT+G+  HTDPG +T+L
Sbjct:   27 DERPKVAYNEFSNDIPVISLAGIDGEK-RGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKG-GFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLL 227          
BLAST of FC878351 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.421e-15
Identity = 64/205 (31.22%), Postives = 93/205 (45.37%), Query Frame = 1
Query:  226 RPVSDVVPTIDLSGVDSDDLRPTIVEKIARASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGV-SYISNIDLFHSKAASWRDTLQIRL-----------GLTEPELEEVPEICRKEAVEWNHHVKQXXXXXXXXXXXXXXXKTDRLKEKT--FLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTIL 798
            R  +  +P +DLS  D + +R  +V    +AS E G FQVVNHGI  E++ R+    + F E P   K  V + E++K +  Y + +        +W D L  R+               PE  EV E       E+  HVK+               K D LKE     +   MM  +YYP CP+PDL +G+ +HTD   +T+L
Sbjct:   37 RGPTPAIPVVDLSDPDEESVRRAVV----KASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNE-------EYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLL 230          
The following BLAST results are available for this feature:
BLAST of FC878351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACCH1_ARATH7.995e-4338.311-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_ARATH5.182e-4235.681-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH1.155e-4136.781-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH1.969e-4136.78Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
DV4H_CATRO4.851e-4036.99Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_SOLLC5.550e-3636.071-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_ARATH1.679e-1629.47Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_MATIN3.740e-1628.99Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_DIACA3.740e-1629.56Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FLS1_ARATH1.421e-1531.22Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ7YA21RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ7YA21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878351 ID=FC878351; Name=FC878351; organism=Citrus clementina; type=EST; length=798bp
AAACCACTCCATTCATTTGTTTCAACTCAAGACATCAAATATCAATTAAC
AAGAAGAGCTACAATCATGAGCCTAGAATCATACGACAGGGCCAAAGAAG
TGAAACGATTCGACGAGTCCAAAGTCGGGGTCAAAGGTTTAGTTGACTTG
GGCGTCACCGCCATCCCCCGCTTTTTCATCCACCCACCCGCCACTCTTGC
CGATCTCAGACCCAAGTCAAAGACCCGGCCCGTCTCTGATGTAGTCCCCA
CCATCGATTTATCGGGCGTTGACTCGGACGATCTGCGGCCGACGATTGTG
GAAAAGATAGCACGTGCCTCGCGGGAGCTGGGGTTCTTTCAGGTTGTGAA
TCACGGCATCGGAGTTGAGGTCTTGGAGCGTATGGTTCGGGCCATTAAAG
GGTTTCATGAACAGCCGCCAGAGATCAAGGCGCCGGTGTATCGGAGGGAG
AACACCAAAGGCGTGTCTTACATTTCCAACATCGATTTGTTTCACTCTAA
AGCTGCCAGCTGGAGGGACACACTGCAGATAAGGCTAGGTCTGACGGAAC
CAGAGCTTGAAGAAGTTCCTGAAATATGTAGGAAAGAGGCAGTCGAGTGG
AACCACCATGTAAAACAGCTCGGAGAGCTTTTGTTTGGGCTGCTGTGTGA
AGGTTTGGGGTTGAAAACCGATAGGTTGAAGGAAAAGACCTTCCTGGAAG
GGAGGATGATGGTGGGCCATTATTATCCCTACTGTCCGCAGCCTGATCTG
ACAGTGGGGATCACATCTCATACTGATCCAGGGCCATTGACAATCTTG
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