FC878363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT31_ORYSJ (Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.497e-101 Identity = 175/211 (82.94%), Postives = 188/211 (89.10%), Query Frame = 3 Query: 117 AVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGS-----VETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 AVP+WLNKGDNAWQMISATLVG+QSVPGLVILYGSIVKKKWAVNSAFMALYAFAAV +CW TW Y MSFG KLLPFWGKA PALGQ FL+ Q+ LP+TTQF+ G VET V P YPMA+MV+FQCVFAAITL++LAGS+LGRMNIKAWM FVPLWLTFSYTVGAFSLWGGGFLFH GVMDYSGGYVIHLSSG+AGFTAAYWVGPR Sbjct: 18 AVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPR 228
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT32_ORYSJ (Ammonium transporter 3 member 2 OS=Oryza sativa subsp. japonica GN=AMT3-2 PE=2 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.584e-98 Identity = 165/213 (77.46%), Postives = 188/213 (88.26%), Query Frame = 3 Query: 96 YQGGTSAAVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 YQG TSA+V DWLNKGDNAWQ+++AT+VGLQSVPGLV+LYG +VKKKWAVNSAFMALYAFAAV ICW TWAY MSFG+KLLP WGKA PAL Q L+ ++ALP T + DGSVETA V P YPMA++V+FQCVFAAITL+++AGS+LGRM+ AWM FVPLWLTFSYTVGAFSLWGGGFLFH GV+DY GGYVIH+S+GIAGFTAAYWVGPR Sbjct: 12 YQGNTSASVADWLNKGDNAWQLVAATVVGLQSVPGLVVLYGGVVKKKWAVNSAFMALYAFAAVWICWVTWAYNMSFGEKLLPIWGKARPALDQGLLVGRAALPATVHYRADGSVETAAVEPLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLAWMIFVPLWLTFSYTVGAFSLWGGGFLFHWGVIDYCGGYVIHVSAGIAGFTAAYWVGPR 224
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT33_ORYSJ (Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica GN=AMT3-3 PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 9.192e-96 Identity = 164/209 (78.47%), Postives = 183/209 (87.56%), Query Frame = 3 Query: 108 TSAAVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 T+ + PDWLNKGDNAWQM SATLVGLQS+PGLVILYGSIVKKKWA+NSAFMALYAFAAV ICW WAY MSFGD+LLPFWGKA PALGQ FL+ QS L T + +GS E M+ P YP+A+MV+FQC+FA+IT++ILAGS+LGRMNIKAWMAFVPLW+TFSYTV AFSLWGGGFLF GV+DYSGGYVIHLSSGIAG TAAYWVGPR Sbjct: 12 TTPSSPDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFASITIIILAGSLLGRMNIKAWMAFVPLWITFSYTVCAFSLWGGGFLFQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPR 220
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT22_ORYSJ (Ammonium transporter 2 member 2 OS=Oryza sativa subsp. japonica GN=AMT2-2 PE=2 SV=2) HSP 1 Score: 317.775 bits (813), Expect = 3.871e-86 Identity = 145/206 (70.39%), Postives = 174/206 (84.47%), Query Frame = 3 Query: 117 AVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 AVP WLNKGD AWQ+++AT VG+QS+PGLV++YGSIVKKKWAVNSAFMALYA+A+ +I W ++M+FGD+LLPFW KAGPAL Q FL++++ P T + DG++ET PFY A++V F+ FAAITLV+LAGS+LGRMNIKAWMAF PLWL FSYTVGAFSLWGGGFL+ GV+DYSGGYVIHLSSG+AGFTAAYWVGPR Sbjct: 20 AVPAWLNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHYGSDGTLETPRTEPFYAEAALVLFEFEFAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGVAGFTAAYWVGPR 225
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT23_ORYSJ (Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.277e-85 Identity = 147/206 (71.36%), Postives = 173/206 (83.98%), Query Frame = 3 Query: 117 AVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 AVP+WLN GDN WQ+ +AT VGLQS+PGLV+LYGSIVKKKWAVNSAFMALYA+A+ +I W ++M+FGD+LLPFWGKAG AL + FL+ ++++P T + DG++E+ PFYP ASMV FQ AAITLV+LAGS+LGRMNIKAWMAF PLWL FSYTV AFSLWGGGFL+ GV+DYSGGYVIHLSSGIAGFTAAYWVGPR Sbjct: 16 AVPEWLNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHYGKDGALESPRTEPFYPEASMVLFQFELAAITLVLLAGSLLGRMNIKAWMAFTPLWLLFSYTVCAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGFTAAYWVGPR 221
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT2_ARATH (Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2) HSP 1 Score: 308.916 bits (790), Expect = 1.798e-83 Identity = 143/205 (69.76%), Postives = 170/205 (82.93%), Query Frame = 3 Query: 120 VPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 VP+WLNKGDNAWQ+ +ATLVGLQS+PGLVILY SIVKKKWAVNSAFMALYAFAAV++CW YKM+FG++LLPFWGK GPA Q +L Q+ +P + + P++PMA++V+FQ FAAIT +++AGSVLGRMNIKAWMAFVPLWL FSYTVGA+S+WGGGFL+ GV+DYSGGYVIHLSSG+AGF AAYWVGPR Sbjct: 12 VPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSN-----------VAAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPR 205
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT21_ORYSJ (Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica GN=AMT2-1 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 8.924e-83 Identity = 147/206 (71.36%), Postives = 172/206 (83.50%), Query Frame = 3 Query: 117 AVPDWLNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 AVPDWLNKGDNAWQ+ ++TLVG+QS+PGLV+LYGSIVKKKWAVNSAFMALYA+A+ ++ W ++M+FGD+LLPFWGKAG AL Q +L+ ++ LP T G++ PFYP A++V FQ FAAITLV+LAGSVLGRMNIKAWMAF PLWL SYTVGAFSLWGGGFL+ GV+DYSGGYVIHLSSGIAGFTAAYWVGPR Sbjct: 13 AVPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH----GAIPRTE--PFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKAWMAFTPLWLLLSYTVGAFSLWGGGFLYRWGVIDYSGGYVIHLSSGIAGFTAAYWVGPR 212
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: Y663_METTH (Putative ammonium transporter MTH_663 OS=Methanobacterium thermoautotrophicum GN=MTH_663 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.016e-34 Identity = 72/201 (35.82%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 132 LNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 LN GD AW ++S LV L +VPG+ + YG + KK+ +N+ F++L AFA I W + Y+ +FG ++ F G P + G A + P P + FQ FAAIT+ +++G+V+ RM AW+AF+ LW++ Y A +WGGGFL G +D++GG V+H++SG+A Y +G R Sbjct: 10 LNSGDTAWMLVSTALVMLMTVPGVALFYGGLTKKENVLNTMFLSLIAFAVTSIIWVLYGYQFAFGADIMGFIGS----------------PVNLLMNGVGVNTAAALAPTIPDFLYIAFQLTFAAITVALISGAVVERMKFSAWLAFIVLWVSLVYVPVAHWVWGGGFLAQLGALDFAGGTVVHINSGVAALALVYLLGKR 194
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: AMT_AQUAE (Ammonia channel OS=Aquifex aeolicus GN=amt PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.681e-29 Identity = 69/201 (34.33%), Postives = 106/201 (52.74%), Query Frame = 3 Query: 132 LNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 L+ G+ AW ++++ LV +VPGL + YG + K K +N+ M+ AFA V + W Y +++GD + F G + K + ++ D G YP + FQ FA IT +++GS +GRM AW+ F LW F Y A +WGGGFL + G +D++GG V+H+++GIAG A +G R Sbjct: 25 LDTGNTAWMLVASALVVFMTVPGLALFYGGLDKSKSILNTIAMSFSAFAVVTLTWIFVGYSVAYGDDIFGFIGNPFQYVLGKGISGINS--------DTG----------YPALLDLMFQLTFATITTALISGSFVGRMKFSAWILFAILWSVFVYPPVAHWVWGGGFLANDGALDFAGGTVVHINAGIAGLVGALILGRR 207
BLAST of FC878363 vs. ExPASy Swiss-Prot
Match: Y661_METTH (Putative ammonium transporter MTH_661 OS=Methanobacterium thermoautotrophicum GN=MTH_661 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.281e-28 Identity = 67/201 (33.33%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 132 LNKGDNAWQMISATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWATWAYKMSFGDKLLPFWGKAGPALGQKFLIKQSALPETTQFHDDGSVETAMVLPFYPMASMVWFQCVFAAITLVILAGSVLGRMNIKAWMAFVPLWLTFSYTVGAFSLWGGGFLFHGGVMDYSGGYVIHLSSGIAGFTAAYWVGPR 734 LN GD AW +IS LV L +VPG+ + Y + K++ +N+ F++ + V + W + Y + FG + G +G + SA + P P FQ FAAIT+ +++G+V+ R+ +W+ F+PLW Y A +WGGGFL + GV D++GG V+H++SGIA A GPR Sbjct: 3 LNSGDTAWMLISTALVILMTVPGVAMFYSGLTKRENVLNTIFLSFVSLGIVSLLWFLFGYGLIFGGDVSGIIGSH--QVGISLINLGSA---------------SKYAPTIPEGLFAIFQMTFAAITVALISGAVVERIKFSSWILFIPLWFALVYVPVAHWVWGGGFLQNLGVHDFAGGIVVHITSGIAALALALVTGPR 186 The following BLAST results are available for this feature:
BLAST of FC878363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878363 ID=FC878363; Name=FC878363; organism=Citrus clementina; type=EST; length=734bpback to top |