FC878431

Overview
NameFC878431
Unique NameFC878431
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.122e-22
Identity = 60/176 (34.09%), Postives = 93/176 (52.84%), Query Frame = 1
Query:  118 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 630
            CSP  + + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+             D +GYG S  P E E+ + + +  +++  L+ LGI +   +  D+     +  AL HPERV  V +L  P +PP       E  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  230 CSP--NDVSHGYVTVKPGIRLHFVEMGSGP-AICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.184e-22
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = 1
Query:  118 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 630
            C+P  + + H Y+ V+ G+ LH  E G+GP  +   HGFPE W+SWR+Q+             D +GYG S  P E E+ + + +  +++  LD LGI +   +  D+     +  AL +PERV  V +L  PF+PP       +  +S+P   Y   +QEPG AEA+  ++ ++T
Sbjct:  230 CNP--NDVSHGYVTVKPGIRLHFVEMGSGP-ALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT 402          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.046e-21
Identity = 61/176 (34.66%), Postives = 91/176 (51.70%), Query Frame = 1
Query:  118 CSPKMDKIEHKYIKVQG-LNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 630
            C+P    + H Y+ V+  + LH  E G+GP  V   HGFPE WYSWR+Q+             D +GYG S  P E E+   + +  +++  LD LG+++   +  D+G    +  AL +PERV  V +L  PFIP        E  K+ P   Y   +QEPG AEA+  ++ ++T
Sbjct:  232 CNPS--DMSHGYVTVKPRVRLHFVELGSGP-AVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRT 404          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 60/176 (34.09%), Postives = 91/176 (51.70%), Query Frame = 1
Query:  118 CSPKMDKIEHKYIKVQ-GLNLHVAETGTGPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKT 630
            C P    + H Y+ ++ G+ LH  E G+GP  V   HGFPE W+SWR+Q+             D +GYG S  P E E+ S + +  D++  L+ LG+++   +  D+G    +  AL +PERV  V +L  PF+P        E  K+ P   Y   +QEPG AEA+  ++  +T
Sbjct:  232 CDPSA--LSHGYVLIKPGVRLHFVEMGSGP-AVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQLYFQEPGVAEAELEQNLDRT 404          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.380e-16
Identity = 50/177 (28.25%), Postives = 83/177 (46.89%), Query Frame = 1
Query:  130 MDKIEHKYIKVQGLNLHVAETGT--GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP---FIPPGTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNI 645
            MD ++ +++   G+ LHVA  G   GP ++V LHGFPE WY W++Q+            PD RGY LSD P   +      + +D++  +      K  ++  D+G   A+  A   PE +  +I + +P    +   T  +     +  YI+ +Q P   EA    +D  T+ + I
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGP-LIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPLYPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDKAI 176          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16
Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1
Query:  145 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 513
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWRHQ+             D RGYG SD PA  E      +  D+   LD LG +K  L+  D+G   A+L A+ +PE +  +I +  P
Sbjct:   69 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSEYRVVAL-DLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFP 193          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.422e-14
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 1
Query:  145 HKYIKVQ--GLNLHVAETGT-GPNVVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 513
            H Y++++  GL  H    G  G  +++ LHGFPE WYSWR+Q+             D RGYG +D P   +      +  D+   LD LG +K  L+  D+G   A+L A+ +PE V  +I +  P
Sbjct:   71 HCYVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVAL-DLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFP 195          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  142 EHKYIKVQ--GLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVPFIPPGTAEFHKSLPEGFYISRW 579
            +H YI+++  G+  H   +G   N +++ LHGFPE WYSWR+Q+             D RG+G SD P+  E    + +  DL   +  LG ++  LV  D+G   A+ FA+ H + V+ +I +  P  P    ++  S P   + SR+
Sbjct:   74 QHGYIRMKDSGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSNGYRTVAI-DLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPH-PSAFHDYVLSHPSQLFSSRY 220          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.967e-13
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 1
Query:  154 IKVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSGVITLGVP 513
            +K  GL LH    G G   +++FLHGFPE W+SWR+Q+             D RGY  SD P E +  +   + +D+  T+  LG +K  LV+ D+GA  A+ F++ +P  V  ++    P
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQL-REFQSHFHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP 206          
BLAST of FC878431 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  142 EHKYI--KVQGLNLHVAETGTGPN-VVVFLHGFPEIWYSWRHQMVXXXXXXXXXXXPDYRGYGLSDPPAEPEKASFKDITNDLLATLDHLGINKVFLVAKDFGARPAYLFALLHPERVSG-VITLGVP 513
            EH ++  K  GL LH    G G   +++FLHGFPE W+SWR+Q+             D RGYG SD P + +  +   +  D+   +  LG +K  LVA D+GA  A+ F++ +P  V   V+  G P
Sbjct:   74 EHGFLNLKSSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQL-REFQSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAP 200          
The following BLAST results are available for this feature:
BLAST of FC878431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
HYES_RAT4.122e-2234.09Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE9.184e-2233.52Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
HYES_HUMAN2.046e-2134.66Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_PIG3.490e-2134.09Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
YFHM_BACSU3.380e-1628.25AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX4_MOUSE5.766e-1636.51Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN2.422e-1434.13Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR2.051e-1331.54Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
EPHX3_MOUSE5.967e-1334.71Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX3_HUMAN1.736e-1235.94Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA94CF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94CF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878431 ID=FC878431; Name=FC878431; organism=Citrus clementina; type=EST; length=885bp
TCCATTTCGAAACTCTGAAACGAATCTCTCTTATCATCCATCTTCATATG
CGCAAGAGTCATCATTACCCATACTCTGTCTTCATACACCTTAACATAAA
CAGCAGTGCGCAGGATTTGCTCTCCAAAAATGGACAAAATTGAGCACAAG
TACATCAAAGTACAAGGCCTGAACCTTCACGTCGCCGAGACAGGAACAGG
TCCAAATGTGGTGGTGTTTTTGCATGGGTTCCCCGAGATATGGTACTCGT
GGCGCCATCAGATGGTGGCTGTAGCCGCTGCTGGCTTCAGGGCTATTGCG
CCTGATTACAGAGGCTACGGCCTCTCTGACCCACCTGCTGAACCCGAAAA
GGCCTCCTTTAAAGACATCACTAATGATCTCCTCGCCACTTTAGATCACC
TCGGAATTAACAAGGTTTTTCTTGTTGCAAAAGATTTTGGAGCCCGGCCT
GCCTACCTGTTTGCACTTCTACACCCAGAGAGGGTCTCCGGTGTTATTAC
ATTAGGAGTGCCGTTTATACCTCCAGGTACTGCTGAATTTCACAAATCCC
TTCCTGAAGGTTTCTACATATCGAGATGGCAGGAACCTGGACGAGCAGAA
GCTGATTTTGGTCGCCATGATGCAAAGACTGTGGTGAGAAACATTTACAT
TCTTTTCTCCAGAAGTGAAATACCAATAGCACCTGAAAACAAGGAGATCA
TGGATTTGGTGGATGCTTCTACTCCTCTTCCACCTTGGCTCACAGCGGAA
GATCTTGCTACTTATGGAGCTTTTGTACGAGAAGTCTGGATTTCGAACTG
CATTGCAAGTTCCCTATAGGTCAATCCATGAAAAGTTCAGCTTACCAAAA
CTAACGGTTAAAAGTTCCAGCACTACCGGATATTG
back to top