FC878435

Overview
NameFC878435
Unique NameFC878435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878435 vs. ExPASy Swiss-Prot
Match: DBAT_TAXCU (10-deacetylbaccatin III 10-O-acetyltransferase OS=Taxus cuspidata PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 46/157 (29.30%), Postives = 77/157 (49.04%), Query Frame = 1 
Query:  220 KLIKESTFYLFNNYYWTCGRLRRSDSGRPYLKCNDCGARFVEAQCDKTVDELLEMGDYSSFPNLLVYHQPIGPDLAFSPPIYLQVTWFKCGGMSLGMSWAHIVGDAFSACEFINTMGQILTA-IKANGPPTCAKSISPGKIVKLEMSSSFFKPKDPI 687
            K+I+++   +   Y    GRLR+ ++G   ++C   GA FVEA  D  +  L ++ DYS     L++  P   D+    P+ +QVT F CGG  +G+S+ H + D   A +F+  MG++    IK +  P   + +               KP+DP+
Sbjct:   62 KVIRQALSKVLVYYSPFAGRLRKKENGDLEVECTGEGALFVEAMADTDLSVLGDLDDYSPSLEQLLFCLPPDTDIEDIHPLVVQVTRFTCGGFVVGVSFCHGICDGLGAGQFLIAMGEMARGEIKPSSEPIWKREL--------------LKPEDPL 204
The following BLAST results are available for this feature:
BLAST of FC878435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DBAT_TAXCU5.164e-1229.3010-deacetylbaccatin III 10-O-acetyltransferase OS=... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA15CB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878435 ID=FC878435; Name=FC878435; organism=Citrus clementina; type=EST; length=899bp
CTCGATCAAATTCTTCGTCAATAATCTCTCTCTCTCAAAACCTCAGCCAT
GGTCAACGACTTACTAATTCACAGCATCCGGCTCTCATCGGTCGGGCCGG
GGAAGGCGACCGGGTCCGACGTGGTTCATGAGCTGAGCGGCATGGACTTA
GCCATGAAGCTTCATTATCTCAAAGGTTTCTACATTTTTAGAAGCCATGC
CGTACAAGGGCTAAGCATCAAGCTCATCAAGGAATCAACTTTCTATTTGT
TCAACAATTATTACTGGACTTGCGGCCGGCTTAGACGATCGGATTCCGGC
AGGCCCTACTTGAAGTGCAACGATTGCGGCGCCAGGTTTGTTGAGGCTCA
GTGTGACAAAACTGTTGACGAACTGCTGGAAATGGGAGACTATTCTTCTT
TCCCGAATCTGCTTGTTTATCACCAACCTATTGGTCCTGATCTAGCGTTT
TCCCCTCCAATTTACTTACAGGTTACATGGTTCAAATGTGGAGGAATGTC
ACTTGGCATGAGCTGGGCCCATATTGTTGGAGATGCATTTTCAGCTTGTG
AGTTCATAAATACGATGGGCCAAATTCTCACCGCGATTAAAGCCAATGGA
CCACCCACTTGTGCAAAGTCAATTTCACCCGGCAAGATAGTGAAATTAGA
AATGTCATCATCATTTTTCAAACCCAAAGACCCAATTTCCATAACATGGG
TCGACCCGGTTGGAGACCATTGGGTAACTGCCAATAACTGTAAGATGGAC
ACATTCTCATTCCACTTAACAGACTCCCGAATTTCCCATTTACAATCAAA
TTTCAGGAATCATCATCAGATTCCAGTTTTTGAGTCTCTTTGTGCATTAT
TTGGGCATACGTAGCCAAAATCAGAGATGGGTTTGGACCAACAATGTGA
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