FC878440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD22_CAEEL (Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.563e-26 Identity = 72/217 (33.18%), Postives = 119/217 (54.84%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSV 848 N+F ++A+ H + I +L+ K+ K ++C+G+S +SQ L A+ R L+ +++ Y+ +Y++ F RS+YM + D F + ++VP A+LALLI+ H+ + W F +YLEAV++LPQL ++Q+T E TAHY+FALG R L +W+ + + +V+++ IVQT + ADF Y YV V Sbjct: 2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNTTMKITFLAATYA--TVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFELLWTFSIYLEAVAILPQLFLLQSTGSAEVITAHYLFALGSYRALYIFNWIYRYYTE----------DYFDPIVVVAGIVQTVLYADFFYLYVTRV 202
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_ENTHI (ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24 Identity = 68/222 (30.63%), Postives = 114/222 (51.35%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKS-VFGGQLVL 869 NLF ++A+ VH + I L+ K++ K C G+SL+SQ L I R F Y ++ + IY+I R++Y + D ++Y++VPC VLA + T + I W F ++LEAV++LPQ+ ++++T VE + Y+F LG+ R L +W+ + + + W + I +QT + ++ YYY+KS V G + VL Sbjct: 4 NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNTILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIF---TEDYSITEICWTFSIFLEAVAILPQILLLRSTGEVENLNSQYIFCLGLYRALYIINWIYRYATEQSY---------WSPLTWICGSIQTLLYVEYFYYYIKSRVEGTKFVL 213
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_CAEEL (ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24 Identity = 68/214 (31.78%), Postives = 110/214 (51.40%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSV 848 NLF A+ H+I I VL+ K+ K ++C G+S +SQ L A+ R F + + + +Y++ +++Y + D+F I ++V+P +LALLI+ I + W F +YLEAV+++PQL ++ T E TAHY+FALG RFL +WV + + + +++ IVQT + ADF Y Y+ V Sbjct: 2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNTAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYILNWVYRYYTE----------SFFDPISVVAGIVQTVLYADFFYLYITRV 202
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_DICDI (ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24 Identity = 70/227 (30.84%), Postives = 121/227 (53.30%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN---RIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKS-VFGGQLVL 869 NLF + +H + +L++K+ +K+CAG+SLKSQ L I R L+ ++V Y + +++I + +Y +D D F I Y++ CA+L+L+ + T+ I + I W F +YLE++++LPQL ++Q T VE T++Y+ LG R +W+ ++ Y + ++S ++QT + ADF YYY KS ++G +LVL Sbjct: 2 NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSLYITFMKITYIAVSY--YTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYSTFLEILWTFSIYLESIAILPQLILLQRTGEVEALTSNYIVLLGGYRAFYLFNWIYRI----------TFYNWSGKIEMLSGLLQTILYADFFYYYAKSRMYGKKLVL 216
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_CAEBR (ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.560e-24 Identity = 64/214 (29.91%), Postives = 110/214 (51.40%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXX-WVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSV 848 N+F + A+ H++ I +L+ K+ K ++C G+S +SQ L A+ R F Y ++ +Y++ +++Y + D F I ++V+P +LAL+I+ + + W F +YLEAV+++PQL ++ T E TAHY+FALG RFL +WV + + + +++ IVQT + ADF Y Y+ V Sbjct: 2 NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYNTVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIINHEF---MFMEVMWTFSIYLEAVAIMPQLFMLSRTGNAETITAHYLFALGSYRFLYIFNWVYRYYTE----------SFFDPIAVVAGIVQTVLYADFFYLYITRV 202
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_DROME (ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.239e-23 Identity = 68/220 (30.91%), Postives = 117/220 (53.18%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQ 860 N+F A + H I +L+ K+ K ++CAG+S KSQ L A+ R L+ ++V Y+ +Y++ +++Y + D+F I +++VPCA+L+L+I+ + + + W F +YLE+V++LPQL ++ T E T+HY+FALG R L +WV + + + L+A+ G +VQT + DF Y Y+ V G+ Sbjct: 2 NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN--SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFT---VMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAG----------VVQTVLYCDFFYLYITKVLKGK 206
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD2_PETHY (ER lumen protein retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23 Identity = 68/217 (31.34%), Postives = 117/217 (53.92%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKS 845 N+F +A + H + VL+ K+ K+CAG+SLK+QEL A+ R ++ F+ Y+ +++ +R + +R SY +D+D F ++V+PC +LAL+I+ + + W F +YLEAV++LPQL ++Q T+ ++ T Y+F LG R +WV + + H + W + I+ ++QT + ADF YYY +S Sbjct: 2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYNTTMKLVFLGSSLS--IVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFT---FKEVMWTFSIYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGAYRSFYILNWVYRYF-TEPHFV------HW--ITWIAGLIQTLLYADFFYYYFQS 204
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD21_RAT (ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23 Identity = 72/221 (32.58%), Postives = 115/221 (52.04%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQ 860 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R L+ +++ Y+ ++MI +++Y + D F + ++VVP AVLA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALGV R L +W+ R H G + + +++ +VQT + DF Y Y+ V G+ Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAVLAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF-----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK 206
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD21_MOUSE (ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23 Identity = 71/221 (32.13%), Postives = 115/221 (52.04%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQ 860 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R L+ +++ Y+ ++MI +++Y + D F + ++VVP A+LA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALGV R L +W+ R H G + + +++ +VQT + DF Y Y+ V G+ Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF-----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK 206
BLAST of FC878440 vs. ExPASy Swiss-Prot
Match: ERD21_BOVIN (ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23 Identity = 70/221 (31.67%), Postives = 115/221 (52.04%), Query Frame = 3 Query: 213 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQ 860 NLF + H + I +L+ K+ K ++CAG+S KSQ L A+ R L+ +++ Y+ ++MI +++Y + D F + ++V+P A+LA L+ H T IL W F +YLE+V++LPQL ++ T E T+HY+FALGV R L +W+ R H G + + +++ +VQT + DF Y Y+ V G+ Sbjct: 2 NLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYNT--CMKVVYIACSFTTVWMIYSKFKATYDGNHDTFRVEFLVIPTAILAFLVNHDFTPLEIL----WTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIW-----RYHF-----EGFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGK 206 The following BLAST results are available for this feature:
BLAST of FC878440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878440 ID=FC878440; Name=FC878440; organism=Citrus clementina; type=EST; length=870bpback to top |