FC878449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_ARATH (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1 SV=2) HSP 1 Score: 420.239 bits (1079), Expect = 3.399e-128 Identity = 209/255 (81.96%), Postives = 220/255 (86.27%), Query Frame = 1 Query: 91 MGLGLLASRTMRP----LKYSNSRVFIRSIVSKXXXXXXXXXXXXXXXXXXXXXXXRSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 MGLG+LASRT+RP L+ S F+R+IVSK R+PVGGARVHF NPEDAIEVFVDGY +K+PKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFA+EVAGVQDLG+LGRGSGEEIGTYVE L Sbjct: 1 MGLGILASRTIRPASRLLQSQTSNFFLRTIVSKPELQSPESAAVSEPEPPTQILPPRNPVGGARVHFSNPEDAIEVFVDGYAVKVPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGILGRGSGEEIGTYVEKL 255 HSP 2 Score: 60.4622 bits (145), Expect = 3.399e-128 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 KLMTSELSGNVIDICPVGALT KPFAFKAR Sbjct: 254 KLMTSELSGNVIDICPVGALTSKPFAFKAR 283
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_SOLTU (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 407.912 bits (1047), Expect = 1.698e-124 Identity = 203/251 (80.88%), Postives = 212/251 (84.46%), Query Frame = 1 Query: 91 MGLGLLASRTMRPLKYSNSRVFIRSIVSKXXXXXXXXXXXXXXXXXXXXXXXRSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 MGLGLLASR +R + + R+IVS R PVGGARVH PNPED IEVFVDGYP+KIPKG TVLQACE+AGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFA+EVAGV+DLGMLGRGSGEEIGTYVE L Sbjct: 1 MGLGLLASRALRSSRIIRNST--RTIVSTPELKNADAAAAAAAADAPSDLPKRHPVGGARVHLPNPEDVIEVFVDGYPVKIPKGMTVLQACEIAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVEDLGMLGRGSGEEIGTYVEKL 249 HSP 2 Score: 60.4622 bits (145), Expect = 1.698e-124 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 KLMTSELSGNVIDICPVGALT KPFAFKAR Sbjct: 248 KLMTSELSGNVIDICPVGALTSKPFAFKAR 277
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_RECAM (NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas americana GN=NAD11 PE=3 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 1.198e-87 Identity = 136/182 (74.73%), Postives = 154/182 (84.62%), Query Frame = 1 Query: 298 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 + VFVDG +++ KG T+LQAC G++IPRFCYH RLSIAGNCRMCLVEVEKSPKPVASCAMP + MKI T+TPL KKAREGV+EFLL+NHPLDCPICDQGGECDLQD +M +GSDRGRF E KR V DKN+GPLVKTVMTRCI CTRCVRFATEVAGV DLG +GRG EI TY++ + Sbjct: 2 VNVFVDGLSVEVKKGATILQACAQVGIEIPRFCYHERLSIAGNCRMCLVEVEKSPKPVASCAMPVMDNMKIFTNTPLVKKAREGVLEFLLVNHPLDCPICDQGGECDLQDLTMVYGSDRGRFHEYKRGVEDKNIGPLVKTVMTRCIHCTRCVRFATEVAGVPDLGTVGRGRDTEISTYIQKV 183 HSP 2 Score: 51.2174 bits (121), Expect = 1.198e-87 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGNVID+CPVGALT KP+AF AR Sbjct: 182 KVFNSELSGNVIDLCPVGALTSKPYAFTAR 211
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_MOUSE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 8.418e-86 Identity = 134/198 (67.68%), Postives = 157/198 (79.29%), Query Frame = 1 Query: 250 SPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 16 SPKGYVRTTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.9878 bits (123), Expect = 8.418e-86 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGNVIDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNVIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_RAT (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 134/199 (67.34%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGYVRSTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_PONPY (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pongo pygmaeus GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_PANTR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan troglodytes GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSKKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_MACFA (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_HUMAN (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Homo sapiens GN=NDUFS1 PE=1 SV=3) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241
BLAST of FC878449 vs. ExPASy Swiss-Prot
Match: NDUS1_GORGO (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.098e-85 Identity = 133/199 (66.83%), Postives = 158/199 (79.40%), Query Frame = 1 Query: 247 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGVQDLGMLGRGSGEEIGTYVENL 843 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+GPLVKT+MTRCIQCTRC+RFA+E+AGV DLG GRG+ ++GTY+E + Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKM 213 HSP 2 Score: 51.6026 bits (122), Expect = 1.098e-85 Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3 Query: 837 KLMTSELSGNVIDICPVGALTFKPFAFKAR 926 K+ SELSGN+IDICPVGALT KP+AF AR Sbjct: 212 KMFMSELSGNIIDICPVGALTSKPYAFTAR 241 The following BLAST results are available for this feature:
BLAST of FC878449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878449 ID=FC878449; Name=FC878449; organism=Citrus clementina; type=EST; length=926bpback to top |