FC878450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.514e-59 Identity = 106/134 (79.10%), Postives = 118/134 (88.06%), Query Frame = 3 Query: 495 VSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 VS E+ HPLPKTADP+VQIAGNF+PV E+PV +NLP GK+PD I+GVYVRNGANPLHEPV GHHFFDGDGMVHAVKF GS SY+CRFT+TNRFVQER L PVFPKAIGELHGHTGIARL+LFY+RA G+V Sbjct: 105 VSHEKLHPLPKTADPSVQIAGNFAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIV 238
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.288e-59 Identity = 108/156 (69.23%), Postives = 118/156 (75.64%), Query Frame = 3 Query: 429 PSKWNFXXXXXXXXXXXXXXXXVSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 P KWNF VS E +HPLPKTADP VQIAGNF+PVPE Q LP GK+P CI GVYVRNGANPL+EPVAGHHFFDGDGMVHAVKF G+ SY+CRFTET R QE+SL PVFPKAIGELHGH+GIARLLLFY+R+LF LV Sbjct: 102 PQKWNFLQKAAATGLDMVETALVSHESKHPLPKTADPKVQIAGNFAPVPEHAADQALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLV 257
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.740e-58 Identity = 103/132 (78.03%), Postives = 114/132 (86.36%), Query Frame = 3 Query: 501 QERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 + R+HP PKTADP VQIAGNF PVPEKPV NLP TG VP+CIQGVYVRNGANPLH+PV+GHH FDGDGMVHAV+F+ GSVSY+CRFTETNR VQER PVFPKAIGELHGH GIA+L+LF +R LFGLV Sbjct: 167 ERRRHPHPKTADPAVQIAGNFFPVPEKPVVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNTRGLFGLV 298
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.832e-53 Identity = 100/169 (59.17%), Postives = 116/169 (68.64%), Query Frame = 3 Query: 390 TTKQQPKENDNFAPSKWNFXXXXXXXXXXXXXXXXVSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 TT P+ N P + N +S E+ PLPKTADP VQIAGN+SPVPE V +NL G +PDCI GVY+RNGANP+ EP AGHH FDGDGMVHAVK GS SY+CRFT+T R VQE+ L PVFPKAIGELHGH+GIARL+LFY+R L GL+ Sbjct: 57 TTATPPQHN----PLRLNIFQKAAAIAIDAAERALISHEQDSPLPKTADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLI 221
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 5.076e-52 Identity = 95/155 (61.29%), Postives = 112/155 (72.26%), Query Frame = 3 Query: 432 SKWNFXXXXXXXXXXXXXXXXVSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 S+WN + +ER PLPKT DP QI+GN++PVPE+ V +L GK+PDCI GVY+RNGANPL EPV+GHH FDGDGMVHAVK G SYSCRFTET R VQE+ L P+FPKAIGELHGH+GIARL+LFY+R LFGL+ Sbjct: 74 SRWNPLQRAASAALDFAETALLRRERSKPLPKTVDPRHQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLL 228
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.868e-46 Identity = 88/132 (66.67%), Postives = 102/132 (77.27%), Query Frame = 3 Query: 504 ERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSV-SYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 ER H LP TADP VQIAGNF+PV E+P LP +G++P I GVY RNGANP +PVAGHH FDGDGMVHA++ G+ SY+CRFTET R QER++ PVFPKAIGELHGH+GIARL LFY+RA GLV Sbjct: 108 ERPHGLPSTADPAVQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLV 239
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: NCED6_ARATH (9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.596e-43 Identity = 80/135 (59.26%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 495 VSQERQHPLPKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFN-KGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRALFGLV 896 + E+ PLPK DP VQ++GNF+PV E PV L G++P C++GVY+RNGANP+ P+AGHH FDGDGM+HAV VSYSCR+T+TNR VQE +L VFPK IGELHGH+G+ARL LF +RA GLV Sbjct: 83 IPMEQNRPLPKPTDPAVQLSGNFAPVNECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLV 217
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.032e-20 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 537 PTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGI 851 P + GNF PV E P ++LP G +PDC+ G +VR G NP PVAG+H+FDGDGM+H ++ G +Y RF ET+R QE F K IG+L G G+ Sbjct: 47 PHHYLTGNFGPVTETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVETSRLKQEEYFGRSKFMK-IGDLKGLFGL 150
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20 Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 537 PTVQIAGNFSPV-PEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRA 881 P ++GNF+PV E P C +LP G +P+C+ G +VR G NP PVAG+H+FDGDGM+H ++ G +Y+ R+ +T+R QE P F K IG+L G G+ + + RA Sbjct: 48 PCHYLSGNFAPVVDETPPCPDLPVRGHLPECLNGEFVRVGPNPKFMPVAGYHWFDGDGMIHGMRIKDGKATYASRYVKTSRLKQEEYFEGPKFMK-IGDLKGFFGLFMVQMQLLRA 162
BLAST of FC878450 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.321e-19 Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 549 IAGNFSPVP-EKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDGDGMVHAVKFNKGSVSYSCRFTETNRFVQERSLSHPVFPKAIGELHGHTGIARLLLFYSRA 881 ++GNF+PV E P ++L G +PDC+ G +VR G NP PVAG+H+FDGDGM+H ++ G SY RF +T+RF QE + F K IG+L G G+ + + RA Sbjct: 48 LSGNFAPVKDETPPVKDLTVQGHLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVKTSRFKQEEYFNGSKFMK-IGDLKGLFGLLMVNMQMLRA 158 The following BLAST results are available for this feature:
BLAST of FC878450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878450 ID=FC878450; Name=FC878450; organism=Citrus clementina; type=EST; length=898bpback to top |