FC878508

Overview
NameFC878508
Unique NameFC878508
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length840
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878508 vs. ExPASy Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13
Identity = 33/86 (38.37%), Postives = 56/86 (65.12%), Query Frame = 2 
Query:   80 LNTPLTVVAAGLAKWLDIYSGVLLVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLAQILT 337
            ++   T++ +    +L IY  +LL+RV L+WFPN+ W  QP  ++  + DPYL +FR I+PP+   +D+SP+L F +L  + QI++
Sbjct:    1 MSNSFTLLFSSFIGFLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILGFILLQCIMQIVS 85
The following BLAST results are available for this feature:
BLAST of FC878508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF19_GUITH9.364e-1338.37Uncharacterized protein ycf19 OS=Guillardia theta ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10CA11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10CA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878508 ID=FC878508; Name=FC878508; organism=Citrus clementina; type=EST; length=840bp
CCCACAACCAACAACCAATTTGGTTCAGTCTGTGGGGCCCTTGTTCTTCG
CGGCTCTCCGTGAGCGCCCTAGCGGGAGCTTGAACACGCCGCTCACGGTT
GTGGCGGCGGGATTGGCCAAGTGGCTTGACATTTACAGTGGGGTTTTGTT
GGTTAGGGTTTTGCTGAGTTGGTTCCCCAACATTCCTTGGGAAAGGCAGC
CGCTTTCGGCCATTCGGGACTTGTGTGATCCTTATTTGAATCTCTTTCGG
AATATTATCCCCCCTGTTTTCGATACACTGGATGTCAGCCCCTTGTTAGC
TTTCGCCGTTTTGGGAACACTCGCCCAGATACTTACTTTCAGTCGGGGAG
CGTGAGTAAGTGTCATTAATAGTGAATATTGAGTTCTCAAATATTGATAC
AGTTTGGATTGTTGGATGTACGTGCCAGTTTCTAATGTGGTATTGTCACA
TTTTGATACTTAGTGCCATGTTTGAATTTTACATTTGAGTTGCTGGTAGT
GTTTTGCATTTCCTGTTGCTTGATCTTGGGAATTTCCAATTAATGTTTGA
AAAGATTTTTTGTGTTGAATAGGTAGAAATGAGCTGATAATTTCTTACTT
GATGTTTGAAAATCTTATCTGATTTCCTATATCCGAGTTATTTCAGACAC
GTGCATCTATGGGAGGTAGGGAGGGAAGATAGAATCAATTGTTTTGAGTT
TTAGATATACTGTCCTGGCAGTGATGGTTGCTCTTTTACAGGAATTGTTT
ATGTTGAATGGAGTGTGTGGGTGTGGGTGTGGTTGCATGTTTGCATGAGA
TAGACATTGAGATAGATAATAGATAGATAACTTGTTAAAA
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