FC878512

Overview
NameFC878512
Unique NameFC878512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878512 vs. ExPASy Swiss-Prot
Match: ANTA_GENTR (Anthocyanin 5-aromatic acyltransferase OS=Gentiana triflora PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.210e-23
Identity = 86/290 (29.66%), Postives = 150/290 (51.72%), Query Frame = 3 
Query:   48 EVTKVTPLRSHSSSAQELTLPLTYFDILWLKFPPVERIFFYEITGLASDFFNSEIVPRXXXXXXXXXXXXXXXAGSIVWRPXXXXXXXXPVIYYSPDDDDYGVSVTVAVS-SNNDFSHLSGNGIRGDVEFHPL---VPQL--SISDNKA-EIVAAQITLFPDRGFSIGVSSHHAILDGKSTTMFVKSWAYLCKQLAELEQEPSNVNVLPELLTPVFDRTLIKDPKGLYMRYFN-----MWFSSDPNSKPSLKVLPPVSVDFNKLVRASFVLTREDIKKLRDSINDLNDSK 881
            E  +VTP     ++  EL+LP+T+FDI WL    ++ + FY+     + F ++ ++P                +G+++           P   YS D+ D   S+T+ V+ S+ DF +L G+ +    + H L   +P++  ++ D K   +VA Q+T+FP+RG ++ +++HH+I D KS  MF+ +WAY+ K          + ++L   L P FDR++IKD  GL   ++N     +   S   SKP           FNK VRA++VL+  +I+KL++ + +L  S+
Sbjct:   11 EKCQVTP--PSDTTDVELSLPVTFFDIPWLHLNKMQSLLFYDFPYPRTHFLDT-VIPNLKASLSLTLKHYVPLSGNLLM---PIKSGEMPKFQYSRDEGD---SITLIVAESDQDFDYLKGHQLVDSNDLHGLFYVMPRVIRTMQDYKVIPLVAVQVTVFPNRGIAVALTAHHSIADAKSFVMFINAWAYINK-------FGKDADLLSANLLPSFDRSIIKDLYGLEETFWNEMQDVLEMFSRFGSKPP---------RFNK-VRATYVLSLAEIQKLKNKVLNLRGSE 274
The following BLAST results are available for this feature:
BLAST of FC878512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ANTA_GENTR2.210e-2329.66Anthocyanin 5-aromatic acyltransferase OS=Gentiana... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10CA12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10CA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878512 ID=FC878512; Name=FC878512; organism=Citrus clementina; type=EST; length=893bp
ATCTATCTATAGCTAGAATATTCATGGCAGCAAAAGTAGTGGAGCAAGAG
GTTACCAAAGTCACCCCCTTGAGATCTCACTCAAGTTCAGCACAGGAGTT
AACTCTTCCTCTCACCTATTTTGATATTTTATGGTTAAAGTTTCCACCTG
TGGAGCGCATCTTCTTCTATGAAATCACAGGCTTAGCCTCTGATTTCTTC
AACTCTGAAATAGTCCCCAGGCTGAAGCACTCTCTGTCCCTCACCCTCCT
TCATTACCTCCCCCTCGCCGGCAGCATCGTCTGGCGACCCCAAGCTCAAG
ACCAGCAGCAACAGCCAGTCATCTACTACTCTCCTGACGACGATGATTAT
GGTGTTTCAGTCACGGTAGCCGTGTCTAGTAACAATGACTTCAGTCACCT
CTCCGGCAACGGGATCCGTGGAGATGTTGAATTCCATCCGCTGGTGCCCC
AGTTGTCGATATCCGACAACAAAGCTGAGATAGTTGCTGCCCAAATAACT
CTGTTTCCGGATCGGGGCTTTTCCATTGGGGTTTCATCTCACCATGCAAT
TCTTGATGGCAAAAGCACAACTATGTTTGTGAAATCTTGGGCTTATTTAT
GCAAACAATTGGCGGAGTTAGAACAAGAACCCTCCAATGTAAATGTGTTA
CCGGAGCTATTAACTCCAGTTTTTGATCGGACTCTCATCAAAGATCCGAA
AGGTCTGTACATGAGGTACTTTAATATGTGGTTTTCTTCGGATCCCAACA
GCAAACCAAGCTTGAAGGTTTTGCCACCAGTCTCGGTGGATTTTAACAAA
TTGGTTCGAGCCTCATTTGTATTAACCCGTGAAGATATTAAGAAGCTCAG
AGATAGTATTAATGATCTAAATGATTCAAAACAAAAACAACTT
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