FC878513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 68/85 (80.00%), Postives = 78/85 (91.76%), Query Frame = 2 Query: 29 MASGDV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 MASGDV +RCFVGGLAWAT D +L AF YGD+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.201e-33 Identity = 68/85 (80.00%), Postives = 77/85 (90.59%), Query Frame = 2 Query: 29 MASGDV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 MAS DV +RCFVGGLAWAT D +L AF YG++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 2 Query: 41 DV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 +V +RCFVGGLAWAT D SL +AF +GDI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.328e-32 Identity = 66/85 (77.65%), Postives = 77/85 (90.59%), Query Frame = 2 Query: 29 MASGDV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 MAS DV +RCFVGGLAWAT + SL AF +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2 Query: 29 MASGDV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 MA+ DV +RCFVGGLAWAT++ SL AF +YG+IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.061e-29 Identity = 60/81 (74.07%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 41 DV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 DV +RCFVGGL WAT D SL AF YGD+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQ Sbjct: 3 DVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29 Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 41 DV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 +V +RCFVGGLAWAT D L F +GD+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.820e-29 Identity = 58/81 (71.60%), Postives = 70/81 (86.42%), Query Frame = 2 Query: 41 DV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 +V +RCFVGGLAWAT D+ L F +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQ Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28 Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 29 MASGDV*FRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 MA+ DV +RCFVGGLAWAT + +L +AF +G +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of FC878513 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 92 SSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 283 +SLH AF YG++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of FC878513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878513 ID=FC878513; Name=FC878513; organism=Citrus clementina; type=EST; length=697bpback to top |