FC878515

Overview
NameFC878515
Unique NameFC878515
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.256e-68
Identity = 124/161 (77.02%), Postives = 141/161 (87.58%), Query Frame = 3
Query:  396 YIHKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQ 878
            Y+HKV VPPKQNLF EF  T KETFF DDPLR FKDQS+S+K +LGIQ++FP+ EWGRKYNLK  RGDLIAGLTIASLCIPQDIGYAKLA+LDP+YGLYSSFVPPL+YA MGSS+DIAIGPVAVVSLLLGT+L+ E+DP     +Y RLAFT+TFF G+TQ
Sbjct:   29 YVHKVEVPPKQNLFNEFMYTFKETFFHDDPLRHFKDQSKSKKLMLGIQSVFPVIEWGRKYNLKLFRGDLIAGLTIASLCIPQDIGYAKLASLDPKYGLYSSFVPPLVYACMGSSKDIAIGPVAVVSLLLGTLLRAEIDPNTNPNEYLRLAFTSTFFAGVTQ 189          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.119e-67
Identity = 120/159 (75.47%), Postives = 140/159 (88.05%), Query Frame = 3
Query:  402 HKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQ 878
            HKVG+PPKQN+FK+F  T KETFF DDPLR FKDQ +S++F+LG+Q++FP+F+WGR Y  KK RGDLI+GLTIASLCIPQDIGYAKLANLDP+YGLYSSFVPPL+YA MGSSRDIAIGPVAVVSLLLGT+L+ E+DP     +Y RLAFTATFF GIT+
Sbjct:   28 HKVGIPPKQNMFKDFMYTFKETFFHDDPLRDFKDQPKSKQFMLGLQSVFPVFDWGRNYTFKKFRGDLISGLTIASLCIPQDIGYAKLANLDPKYGLYSSFVPPLVYACMGSSRDIAIGPVAVVSLLLGTLLRAEIDPNTSPDEYLRLAFTATFFAGITE 186          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.381e-62
Identity = 118/163 (72.39%), Postives = 134/163 (82.21%), Query Frame = 3
Query:  396 YIHKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKA-QYQRLAFTATFFCGITQV 881
            Y+HKVG PPKQ LF+E + +  ETFF D P   FKDQS S+KF+LG+Q IFPI EWGR Y+LKK RGD IAGLTIASLCIPQD+ YAKLANLDP YGLYSSFV PL+YAFMG+SRDIAIGPVAVVSLLLGT+L NE+   N K+  Y RLAFTATFF G+TQ+
Sbjct:   37 YMHKVGAPPKQTLFQEIKHSFNETFFPDKPFGNFKDQSGSRKFVLGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEIS--NTKSHDYLRLAFTATFFAGVTQM 197          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.037e-60
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 3
Query:  396 YIHKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKA-QYQRLAFTATFFCGITQV 881
            Y+HKVG PPKQ LF+E + +  ETFF D P   FKDQS  +K  LG+Q IFPI EWGR Y+LKK RGD IAGLTIASLCIPQD+ YAKLANLDP YGLYSSFV PL+YAFMG+SRDIAIGPVAVVSLLLGT+L NE+   N K+  Y RLAFTATFF G+TQ+
Sbjct:   40 YMHKVGTPPKQTLFQEIKHSFNETFFPDKPFGKFKDQSGFRKLELGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEIS--NTKSHDYLRLAFTATFFAGVTQM 200          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.284e-55
Identity = 107/158 (67.72%), Postives = 124/158 (78.48%), Query Frame = 3
Query:  405 KVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQ 878
            +V  PPK  L K+ +  ++ETFF D PLR FK Q+ ++K +LGIQ +FPI  W R+Y L+K RGDLIAGLTIASLCIPQDIGYAKLAN+DP+YGLYSSFVPPLIYA MGSSRDIAIGPVAVVSLL+GT+ Q  +DP      Y RL FTATFF GI Q
Sbjct:   24 RVLAPPKAGLLKDIKSVVEETFFHDAPLRDFKGQTPAKKALLGIQAVFPIIGWAREYTLRKFRGDLIAGLTIASLCIPQDIGYAKLANVDPKYGLYSSFVPPLIYAGMGSSRDIAIGPVAVVSLLVGTLCQAVIDPKKNPEDYLRLVFTATFFAGIFQ 181          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.681e-47
Identity = 88/162 (54.32%), Postives = 122/162 (75.31%), Query Frame = 3
Query:  399 IHKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQVT 884
            IH V +PPK+  F++ ++ + + FF DDPL+ F++Q+   + ILG+Q++FPIF WG +Y+LK LR D+I+GLTIASL IPQ I YAKLANL P  GLYSSFVPPLIYA +GSSR +A+GPV++ SL++G+ML   + P  +   Y +LAFT+TFF G+ Q +
Sbjct:   26 IHSVCLPPKKTAFQKLKKRVGDVFFPDDPLQRFRNQTWRNRVILGLQSLFPIFTWGSQYDLKLLRSDVISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRHLAVGPVSIASLVMGSMLSESVSPTQDSILYLKLAFTSTFFAGVFQAS 187          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.386e-47
Identity = 92/161 (57.14%), Postives = 113/161 (70.19%), Query Frame = 3
Query:  402 HKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQVT 884
            H V  P  Q   K  + ++KET F DDP R FK+Q+ S+KF+LG++   PIFEW  +YNLK  + DLIAG+TIASL IPQ I YAKLANL P  GLYSSFVPPL+YA +GSSRD+A+G VAV SLL G ML  E+D   +   Y  LAFTATFF G+ + +
Sbjct:   20 HTVEAPQPQPFLKSLQYSVKETLFPDDPFRQFKNQNASRKFVLGLKYFLPIFEWAPRYNLKFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAVLGSSRDLAVGTVAVASLLTGAMLSKEVDAEKDPKLYLHLAFTATFFAGVLEAS 180          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 7.807e-45
Identity = 84/162 (51.85%), Postives = 117/162 (72.22%), Query Frame = 3
Query:  399 IHKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQVT 884
            +HKV  PP ++   + +  LKETFF DDPLR F+ Q    K I   Q IFPI +W  +Y+   L+ D+++GLTIASL IPQ I YAKLANL P  GLYSSFVPPL+YA +GSSRD+A+GPV++ SL+LG+ML+ ++ P+++   + +LAF++TFF G+ Q +
Sbjct:    3 VHKVVAPPHKSTVAKLKTKLKETFFPDDPLRQFRGQPNRTKLIRAAQYIFPILQWCPEYSFSLLKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPVDDPVLFLQLAFSSTFFAGLFQAS 164          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.307e-43
Identity = 87/160 (54.37%), Postives = 112/160 (70.00%), Query Frame = 3
Query:  402 HKVGVPPKQNLFKEFRETLKETFFADDPLRPFKDQSRSQKFI-LGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQ 878
            H+V +PP Q   K  + TL E  FADDP R  +++S++ K I LG++ +FPI EW R Y+L+ L+ D+I+G+TIASL IPQ I YA+LANL P  GLYSS VPPL+YA MGSSRD+A+G VAV SLL   ML  E++ +     Y  LAFTATFF G+ Q
Sbjct:   10 HQVEIPPPQPFLKSLKNTLNEILFADDPFRRIRNESKTSKKIELGLRHVFPILEWARGYSLEYLKSDVISGITIASLAIPQGISYAQLANLPPILGLYSSLVPPLVYAIMGSSRDLAVGTVAVASLLTAAMLGKEVNAVVNPKLYLHLAFTATFFAGLMQ 169          
BLAST of FC878515 vs. ExPASy Swiss-Prot
Match: SUT21_ARATH (Sulfate transporter 2.1 OS=Arabidopsis thaliana GN=SULTR2;1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 3
Query:  417 PPKQNLFKEFRETLKETFFAD-DPLRPFKDQSRSQKFILGIQTIFPIFEWGRKYNLKKLRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTMLQNELDPINEKAQYQRLAFTATFFCGITQVT 884
            P   + + E +  +K +F       +  + Q   ++ +  +Q IFPIF W R Y L   + DL+AGLT+ASLCIPQ IGYA LA LDPQYGLY+S VPPLIYA MG+SR+IAIGPVAVVSLL+ +MLQ  +DP  +   Y++L  T TFF GI Q +
Sbjct:   57 PEPPSPWHELKRQVKGSFLTKAKKFKSLQKQPFPKQILSVLQAIFPIFGWCRNYKLTMFKNDLMAGLTLASLCIPQSIGYATLAKLDPQYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLISSMLQKLIDPETDPLGYKKLVLTTTFFAGIFQAS 213          
The following BLAST results are available for this feature:
BLAST of FC878515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
SUT13_ARATH2.256e-6877.02Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT12_ARATH1.119e-6775.47Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT2_STYHA5.381e-6272.39High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT1_STYHA5.037e-6071.17High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT11_ARATH1.284e-5567.72Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT34_ARATH1.681e-4754.32Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT31_ARATH6.386e-4757.14Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT33_ARATH7.807e-4551.85Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT32_ARATH7.307e-4354.38Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT21_ARATH2.059e-3750.96Sulfate transporter 2.1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA56DA12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA56DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878515 ID=FC878515; Name=FC878515; organism=Citrus clementina; type=EST; length=893bp
AAAAGGCGGTGAAGGTTGAGACGGATAGCTAGGTTCATTGAACCCGGACC
GCATTTGGGTTCTTTCCTTTTTTTCAAGAATAGGTTCGTTTAGTTTTCGA
GATTAATGCAAAATATCGAGGCAGCATGACAACCATTAAGTGTGGAGAAG
CTAGAAGAAAAGGTTTGTTTAAAGGAGCTAAAGTGATTTTTCAGAAGCAA
AGACGTTTTTGAGTTTGTGCGGTTGTGTAATCTTACGTCCACTATCAGTG
GCTTTGGTGAGAAGCATATATGAAAGAGTTGCAGGTGAATTTATAGTCCT
TGCATTCAATGGATCACTCAACTGAAGAGGCTCAAACAAAAGAGATGGAT
ATCAGAAGCCTGTCATCTTCTCACCGTCACTCGCAGAGCGAGCGATACAT
TCACAAGGTGGGAGTTCCCCCGAAGCAAAACCTCTTCAAGGAATTTCGAG
AAACTCTGAAAGAAACATTCTTCGCTGATGATCCTCTGCGCCCCTTCAAG
GATCAATCAAGGTCTCAAAAATTCATCTTAGGCATCCAGACAATATTTCC
CATTTTTGAATGGGGGAGAAAATATAATTTGAAAAAATTAAGAGGAGATC
TCATAGCTGGGCTGACAATTGCAAGTCTCTGTATTCCTCAGGATATTGGA
TATGCAAAGCTTGCAAACTTGGATCCACAGTATGGACTGTACTCCAGCTT
TGTTCCACCATTGATTTATGCCTTTATGGGTAGTTCAAGAGATATAGCTA
TAGGGCCAGTTGCAGTGGTATCTCTCTTGCTAGGAACCATGCTTCAGAAT
GAGCTTGATCCCATAAATGAAAAAGCCCAGTATCAGCGGCTTGCTTTCAC
TGCTACTTTCTTTTGCGGGATTACACAAGTCACCCCTTGGGTT
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