FC878516

Overview
NameFC878516
Unique NameFC878516
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length882
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC878516 vs. ExPASy Swiss-Prot
Match: E13B_BACCI (Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 3 
Query:  738 SARLNTKGKKTIRYGRVEVTARMPRGDWLWPAIWMMPQDSVYGEWAKS 881
            S ++NTK K +++YGRV+  A++P GD +WPA+WM+P+DSVYG WA S
Sbjct:  503 SGKINTKDKLSLKYGRVDFRAKLPTGDGVWPALWMLPKDSVYGTWAAS 550
The following BLAST results are available for this feature:
BLAST of FC878516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
E13B_BACCI1.113e-1156.25Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus ci... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA44BE11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA44BE11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878516 ID=FC878516; Name=FC878516; organism=Citrus clementina; type=EST; length=882bp
CTGGAATCTCCACTCTAGCTATGGAAGGCTCGACAACCGTCACTTCTCCT
GCCGAGGGATCGTCCTCCCGGCGGGTTAATCCCTTCGGAACCCCGGGTGA
TGAGCCGCCCGAGAACCCATTTTCAACTCCTATTGCCGCAACACCTATTG
CAGAGTCCTTAACGTCCCGACGGTCACCACACACTCGGGATGCTTCTACA
TATGAAGTCGCTGGCCCTCGCAGGCGCTTCAAGAGCAGTCGGCTCAAGGG
CGAATTCGAGAAGCCATGGCTCGAAAAGTCCAAGAAGGAAGTCAACTGGG
ACAGCATCATCTTTTACACATGTATCCTCATCGGACTTGGCATTGGAGGA
TTCCTTTGCTGGAAGGAAACTCGGGGCATCCCCAATTATGAATATTGCTT
GATCATGGATGATCACTTTGAGAACCTCGACAACTGGAATCATGAGGTCC
AGATGGGCGGATTTGGCACTGGAACCTTTGACTGGACCACCACCGACAAG
GCCAATTCGTATGTCGACGCCGAGGGCCTGCACATCGTACCCACCTTGAC
GCTTGAGAGCACCGAAATTACCTATGATCAGCTGGTCCACGGCCACACTG
TCAACCTGACGACCGATGGACGCTCCGACGGCAAGTGCACATCTGATGAA
AAAGCCACCGATGATGAATGGGAGACCCGTTGGCCATGCGCCGCCGTCAG
CAACACCACCAAGGGCCAGATCATCAACCCAGTGCGGTCAGCACGACTCA
ACACCAAGGGCAAGAAGACGATCCGCTATGGTCGTGTCGAGGTGACAGCA
CGCATGCCTCGTGGAGACTGGTTGTGGCCGGCAATCTGGATGATGCCCCA
GGACAGCGTCTACGGTGAATGGGCAAAGTCGG
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