FC878519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.011e-92 Identity = 164/204 (80.39%), Postives = 182/204 (89.22%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPSP 896 DVI LA TLA DGRRVHVIERDL+E DRIVGELLQPGGYLKLIELGLEDCV +IDAQRVFGYAL+ DG T++SYPLEKFHSDVAGR FHNGRFVQR+REKAASLPNVR+EQGTVTSL+E+KG++KGVQYKTK G+EL+A+APLTIVCDGCFSNLRRSLCNPKV+VPSCFVGL+LEN +LP NHGHV+LADPSP Sbjct: 76 DVIIVGAGVAGSALAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQELSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSP 279
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 8.639e-60 Identity = 119/205 (58.05%), Postives = 145/205 (70.73%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK--FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPS 893 DVI LA LAKDGRRVHVIERDL EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDG S+P++ F D + R FHNGRFVQRLR+KA+SLPNVRLE+GTV SL+EEKG IKGV YK AGEE TA APLT+VCDGC+SNLRRSL + +V S VG + +NC L ++++ PS Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPS 251
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.514e-59 Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLE-KFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPS 893 DVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+E+IDAQ+ G LFKDG T +P++ F + +GR FHNGRFVQRLR+KA+SLPNVRLE+GTV SL+EEKG +KGV YK +GEE T++APLT+VCDGC SNLRRSL + +V + +G + NC L + H+++A PS Sbjct: 50 DVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETTSFAPLTVVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLIMAKPS 253
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 2.128e-58 Identity = 120/227 (52.86%), Postives = 152/227 (66.96%), Query Frame = 3 Query: 216 DNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPS 893 +N + K P A DADVI LA LAKDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG + +S+P + F + GR F+NGRFVQRLR+KA+SLP V+LE+GTV SL+EEKG IKGV YK AGEE TA+APLT+VCDGC+SNLRRS+ + +V S VG V +NC L ++++ PS Sbjct: 26 NNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAFAPLTVVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQLEDPEKLKLIMSKPS 252
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.056e-57 Identity = 115/207 (55.56%), Postives = 144/207 (69.57%), Query Frame = 3 Query: 282 ADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK--FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNP-KVDVPSCFVGLVLENCNLPFENHGHVVLADPS 893 ADVI LA LAKDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E IDAQ+ G A++KDG +P++ F + + R FHNGRFVQ+LR KA SL NVRLE+GTV SLLEEKG +KGV YK K GEE TA APLT+VCDGC+SNLRRSL + ++ S VG + +NC L H++L+ PS Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETTALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPS 252
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.427e-54 Identity = 111/203 (54.68%), Postives = 138/203 (67.98%), Query Frame = 3 Query: 285 DVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEK-FHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTKAGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADP 890 DVI LA LAKDGRRVHVIERDL EP R +GEL+Q GG L +LGLEDC+E IDAQ A++KDG + +P +K F + GR NGR VQRLR+KAASL NV+LE+GTV SL+EE+G +KGV YK AGEE+TA+APLT+VCDGC+SNLRRSL + +V S VG V +N L + H++ + P Sbjct: 45 DVIIVGAGVAGASLAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLIFSKP 247
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 6.645e-44 Identity = 99/209 (47.37%), Postives = 130/209 (62.20%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPSP 896 D +VI L L++DGR+V VIERDL EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + +++ QI YPL + + +GR FH+GRF+ LR+ A + PN + +G V LLEE + GVQYK K G+ +APLT+V DG FS R+SL + KV V S FVG +++N NH ++LA+PSP Sbjct: 123 DPEVIIVGAGVLGSALVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSP 331
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.253e-42 Identity = 97/209 (46.41%), Postives = 129/209 (61.72%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYAL--FKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPSP 896 D +VI LA L++DGR+V VIERDL EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ + QI YPL + + +G FH+GRF+ LR+ A + PNV+ +G V LLEE + GVQYK K G+ +APLT+V DG FS R+SL + KV V S FVG ++++ N +VL +PSP Sbjct: 121 DPEVIIVGSGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKSLISSKVSVSSHFVGFLMKDAPQFKPNFAELVLVNPSP 329
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.762e-42 Identity = 98/235 (41.70%), Postives = 138/235 (58.72%), Query Frame = 3 Query: 201 RSKSEDNGADSLRKTPTTALNGECPFDADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRT--QISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEKGTIKGVQYKTK-AGEELTAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPSP 896 R + E N +++ T+++ D +VI LA L++DGR V VIERDL EPDRI+GE LQPGGY L ELGL D VE ++A + GY + +R+ QI YP+ + + +G FH+G+F+ LR+ A + PNV+ +G V LLEE + GVQYK K G+ +APLT+V DG FS R++L + KV V S FVG ++++ N +VL DPSP Sbjct: 96 RRRKEVNLSETTLTGAATSVSTSSVTDPEVIIIGSGVLGSALATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYKDKETGDTKELHAPLTVVADGLFSKFRKNLISNKVSVSSHFVGFIMKDAPQFKANFAELVLVDPSP 330
BLAST of FC878519 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.194e-38 Identity = 89/209 (42.58%), Postives = 117/209 (55.98%), Query Frame = 3 Query: 279 DADVIXXXXXXXXXXLANTLAKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEQIDAQRVFGYALFKDGNRTQISYPLEKFHSDVAGRGFHNGRFVQRLREKAASLPNVRLEQGTVTSLLEEK--GTIKGVQYKTKAGEELTAY-APLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCNLPFENHGHVVLADPSP 896 DAD+I L L + GR+V V+ERD+SEPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G GFH GRFV LR+ S PNV + + TV LL ++ I GV +K E Y APLTIVCDGCFS R++ + + V F+GL+L N + GHV+L+ +P Sbjct: 5 DADIIIIGAGITGCALGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEVITGVVTSSKKSESPVEYKAPLTIVCDGCFSKFRKAFIDHPIQVTDHFLGLILTNPDYIAPGRGHVILSKVAP 213 The following BLAST results are available for this feature:
BLAST of FC878519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878519 ID=FC878519; Name=FC878519; organism=Citrus clementina; type=EST; length=898bpback to top |