FC878526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 9.667e-53 Identity = 130/225 (57.78%), Postives = 140/225 (62.22%), Query Frame = 3 Query: 198 MGFDDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASD--EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 MGFDD CNTGLVLGLG P+ NN N Q EPSL+L L G+ S+ V G ++ L RQ S HS VS SFSSGRVVKRERD SD EDE+G++ARKKLRLTK+QSALLEESFK HSTLNPKQKQ LARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL DE Sbjct: 1 MGFDDTCNTGLVLGLG--------PSPIPNNYNSTIRQSSVYK----LEPSLTLCLSGD--------------PSVTVVTGADQ-----------LCRQTSSHSGVS-SFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADE 187
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.823e-51 Identity = 128/235 (54.47%), Postives = 149/235 (63.40%), Query Frame = 3 Query: 198 MGFDDGCNTGLVLGLGFASAIETTPTNKANNI----NIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXX------RASDE--DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 MG DD CNTGLVLGLG + TP N + I + V+H+ ++L +PSL+L L GE Y+ AG + + RQ S HS +S SFSSGRV KRER++ R SD+ DE+GV+ARKKLRLTK+QSALLE++FK HSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE Sbjct: 1 MGLDDSCNTGLVLGLG----LSPTPNNYNHAIKKSSSTVDHRFIRL------DPSLTLSLSGE---------------------SYKIKTGAGAGDQ--ICRQTSSHSGIS-SFSSGRV-KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 200
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.957e-37 Identity = 97/214 (45.33%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 225 GLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 GL LGL F +N + ++ + L + + + S + +P +++ T+ IDVN+ +A G + + +SP+S VS+S +G+ +RE D R +DEDG N+RKKLRL+K+QSA+LEE+FK HSTLNPKQKQALA+QL LR RQVEVWFQNRRARTKLKQTEVDCEFL++CCE LT+E Sbjct: 9 GLSLGLNFPKKQINLKSNPSVSVT-PSSSSFGLFRRSSWNESFTSSVPNS---DSSQKETRTFIRGIDVNRP-PSTAEYGDEDAGV----SSPNSTVSSS--TGKRSEREEDTDPQGS--------RGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEE 203
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 104/235 (44.26%), Postives = 128/235 (54.47%), Query Frame = 3 Query: 210 DGCNTGLVLGLGF---ASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEI--YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG-----------RVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 DG LVLGLG A + ++V + EPS+ L L + + + T ++ + DVN+ +A A E A+P + S + S G R RASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+E Sbjct: 15 DGGRLELVLGLGVGVGAGVRRGEEEERGRREDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWPSETGRSEAAARGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQGGGGGGGGERSSSRASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEE 248
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 104/235 (44.26%), Postives = 128/235 (54.47%), Query Frame = 3 Query: 210 DGCNTGLVLGLGF---ASAIETTPTNKANNINIVNHQQLQLPKGTCFEPSLSLGLPGEI--YPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSG-----------RVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 DG LVLGLG A + ++V + EPS+ L L + + + T ++ + DVN+ +A A E A+P + S + S G R RASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+E Sbjct: 15 DGGRLELVLGLGVGVGAGVRRGEEEERGRREDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWPSETGRSEAAARGFDVNRAPSVAAGAPGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQGGGGGGGGERSSSRASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEE 248
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 101/222 (45.50%), Postives = 120/222 (54.05%), Query Frame = 3 Query: 207 DDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTC--FEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 D G GL LG G + ++ + P C EPSL+L LP + AA T S A S++S ++ VKRER R D+D+DG + RKKLRLTKEQSALLE+ F++HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+E Sbjct: 11 DAGLALGLSLGGGGGGTTDAAAAHRGGC-------RRPSPSSQCPPLEPSLTLSLPDDAAAGAAATATATASGG---------------------GGPAHSVSSLSVGAAAAAAVKRERAEEADGERVSSTAAGR--DDDDDG-STRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEE 201
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 101/222 (45.50%), Postives = 120/222 (54.05%), Query Frame = 3 Query: 207 DDGCNTGLVLGLGFASAIETTPTNKANNINIVNHQQLQLPKGTC--FEPSLSLGLPGEIYPEAATATTKKNSNSIDVNKGYEESAAAGVAEYQILNRQASPHSAVSNSFSSGRVVKRERDLXXXXXXXXXXXXXRASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 D G GL LG G + ++ + P C EPSL+L LP + AA T S A S++S ++ VKRER R D+D+DG + RKKLRLTKEQSALLE+ F++HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+E Sbjct: 11 DAGLALGLSLGGGGGGTTDAAAAHRGGC-------RRPSPSSQCPPLEPSLTLSLPDDAAAGAAATATATASGG---------------------GGPAHSVSSLSVGAAAAAAVKRERAEEADGERVSSTAAGR--DDDDDG-STRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEE 201
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 77/88 (87.50%), Postives = 84/88 (95.45%), Query Frame = 3 Query: 603 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 RASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+E Sbjct: 165 RASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEE 251
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 77/88 (87.50%), Postives = 84/88 (95.45%), Query Frame = 3 Query: 603 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 RASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+E Sbjct: 78 RASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEE 164
BLAST of FC878526 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.295e-36 Identity = 71/87 (81.61%), Postives = 82/87 (94.25%), Query Frame = 3 Query: 606 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDE 866 A+ +D++G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+E Sbjct: 82 AAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEE 168 The following BLAST results are available for this feature:
BLAST of FC878526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878526 ID=FC878526; Name=FC878526; organism=Citrus clementina; type=EST; length=868bpback to top |