FC878527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: HA22I_ARATH (HVA22-like protein i OS=Arabidopsis thaliana GN=HVA22I PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31 Identity = 78/182 (42.86%), Postives = 104/182 (57.14%), Query Frame = 2 Query: 5 LTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSARFSNAPAHENQKRNGEKQHAPSAP---PLPENGFNSPRTPKPGKSKFGFGSPRSSTINRAVSEPTK--SNLAQVNMRVTSEPGS 535 LTV ER DA SW PMY E KLAFFIYLW PKT+GT +VY+S RPY+S+HE DID +LELR R D+A+ YWQ A Q + +I++++A QS P QKR G AP+ P P+P++ +P + S SS+ N +EPT+ S ++ VTS P + Sbjct: 50 LTVFERVGDAFVSWVPMYSEAKLAFFIYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQTRILEILQYVAAQSTPRPQPP----QKRGGRANQAPAKPKKAPVPQS--------EPEEVSLSSSSSSSSSENEG-NEPTRKVSGPSRPRPTVTSVPAA 218
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: HA22J_ARATH (HVA22-like protein j OS=Arabidopsis thaliana GN=HVA22J PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.441e-29 Identity = 61/138 (44.20%), Postives = 89/138 (64.49%), Query Frame = 2 Query: 2 MLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSARFSNAPAHENQKRNGEKQHAPSAPPLPENGFNSPRTPKP 415 +++ ER D SW P+YGE+K+ FF+YLW PKT+GT VY+++L+PY+++HET+IDR+I+ELRAR WD I+Y+ N AQ Q +++ QS RFS A A++ +A S P +N SPR P+P Sbjct: 49 LISSFERVGDFFISWLPLYGEMKVVFFVYLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQSTLIQGFQYVLAQSVRFSAAAANQPPTERNVNMNAQS-PVEMDNDPPSPRAPRP 185
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: HA22H_ARATH (HVA22-like protein h OS=Arabidopsis thaliana GN=HVA22H PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.192e-29 Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 2 Query: 5 LTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSA--------RFSNAPAHENQKR---NGEKQHAPSAPPL------PENGFNSPRTPKPGKSKFGFGSPRSSTINRAVSEPTKSNLAQVNMRVTSEPGSPEDGYIPDSPTTPGTP 583 LT+ ER DA+ASW P+Y E KLAFFIYLW PKT+GT +VY S +PYV+KHE +IDR ++ELR + DLA+ Y + Q + +I+ F+A QS + + AP E QK+ Q A S P + P+ P +PKP SPR + ++ K++++Q + + PG P P P P +P Sbjct: 50 LTIFERVGDALASWVPLYCEAKLAFFIYLWFPKTRGTTYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLAVIYCRKAVSYGQTRIVEILHFVALQSTPKPKPKEKKQAAAPEEEEQKQPDLKATSQAASSNPQVRLQSKKPQLVTKEPISPKP------LSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPPPSP 248
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: HA22G_ARATH (Putative HVA22-like protein g OS=Arabidopsis thaliana GN=HVA22G PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.648e-25 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 5 LTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSARFSNA 313 LT+ ER DA+ SW PMY E KLAFFIYLW PKT+GT +VY S RPY++KHE +IDR +++++ R D+A+ Y Q Q KFF+I++++ QS S A Sbjct: 39 LTIFERIGDALVSWLPMYSEAKLAFFIYLWFPKTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAINQGQTKFFEILQYITEQSTPKSKA 141
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: REEP1_MOUSE (Receptor expression-enhancing protein 1 OS=Mus musculus GN=Reep1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.037e-11 Identity = 45/154 (29.22%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 2 MLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSA---RFSNAPAHENQKRNGEKQHAPSAPPLPENGFNSPRTPKPGKSKFGFGSPRSS 454 + T E F D WFP Y ELK+AF +L SP T+G+ +Y+ + P +S E +ID +++ + R +D +++ + L+ ++ GQ A R + + G+ APS PP P G +S + +P S+ S SS Sbjct: 47 LFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKR--GLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGTGRSSGKHSQPKMSRSASESAGSS 198
BLAST of FC878527 vs. ExPASy Swiss-Prot
Match: REEP1_HUMAN (Receptor expression-enhancing protein 1 OS=Homo sapiens GN=REEP1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11 Identity = 45/154 (29.22%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 2 MLTVLERFLDAIASWFPMYGELKLAFFIYLWSPKTQGTGFVYQSVLRPYVSKHETDIDRRILELRARLWDLAIYYWQNCAQLSQEKFFDIIKFLAGQSA---RFSNAPAHENQKRNGEKQHAPSAPPLPENGFNSPRTPKPGKSKFGFGSPRSS 454 + T E F D WFP Y ELK+AF +L SP T+G+ +Y+ + P +S E +ID +++ + R +D +++ + L+ ++ GQ A R + + G+ APS PP P +G S + +P S+ S SS Sbjct: 47 LFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKR--GLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGSGRASGKHGQPKMSRSASESASSS 198 The following BLAST results are available for this feature:
BLAST of FC878527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878527 ID=FC878527; Name=FC878527; organism=Citrus clementina; type=EST; length=844bpback to top |