FC878529
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP5_ARATH (Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana GN=UBP5 PE=1 SV=2) HSP 1 Score: 357.451 bits (916), Expect = 5.985e-98 Identity = 175/238 (73.53%), Postives = 204/238 (85.71%), Query Frame = 1 Query: 178 MAEVT---TRSRGELTPEEERVLIRDIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVEVL 882 MAEV+ + S +L+PEEERV IRDIAI++EA+SKEGDTF+LI QRWWQ WI+YVNQDQP NT DGSSL EH +S GSS K+PS IDNSDL+ D++ EDP EI++TL EGRDY+LLPQEVWNQL SWYGGGPTLAR+VISSGLSQTELAVEVYPLRLQLL+MP+ + S IRISKKETI ELHRRAC IF L+ E + IWDYYGH+K++LMND+D+TLDDAN+QMDQDILVEVL Sbjct: 1 MAEVSMGSSSSSTDLSPEEERVFIRDIAIAAEANSKEGDTFYLITQRWWQEWIEYVNQDQPCNTNDGSSLSEHCDSPGSSTLKKPSRIDNSDLIYDSSLEDPSNTSEIIETLQEGRDYVLLPQEVWNQLRSWYGGGPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFDLDSEHVRIWDYYGHQKYSLMNDLDKTLDDANLQMDQDILVEVL 238
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP9_ARATH (Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.005e-36 Identity = 81/223 (36.32%), Postives = 131/223 (58.74%), Query Frame = 1 Query: 214 TPEEERVLIRDIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMD-RTLDDANIQMDQDILVEV 879 TPEEE+ ++ ++ SE + KEG+ +F+I++RW+ W YV Q + + S SS + RP IDN D++ +E P++ L+E DY+L+PQEVW +L WY GGP + RK+I G +VEVYPL L L + IR+ K+ +I EL+ + C++ + E+ IWDY+ RK+ L++ + ++L+++++ MDQDIL+EV Sbjct: 20 TPEEEKRIVSELITESEDNLKEGNLYFVISKRWYTSWEKYVEQST-----------KEYISGESSEASRPGPIDNHDIIE---SESDVNDPQLRRLLMERVDYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILLEV 228
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP10_ARATH (Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana GN=UBP10 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36 Identity = 81/224 (36.16%), Postives = 135/224 (60.27%), Query Frame = 1 Query: 214 TPEEERVLIRDIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLV-NDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMNDMD-RTLDDANIQMDQDILVEV 879 TPEEE+ ++ ++ SE + K+G+ +F+I++RW+ W +YV ++ N G S S + RP IDN D++ +D+ DP ++ L+EG DY+L+P++VW +L WY GGP + RK+I G +VEVYPL L L + IR+ K+ +I EL+ + C++ + E+ IWDY+ RK+ L++ + ++L+++++ MDQDILVEV Sbjct: 20 TPEEEKRIVSELTSESEDNLKQGNLYFVISKRWYTSWQEYV-ENSANECSTGES----------SEAPRPGPIDNHDIIESDSDINDP----QLRRLLVEGEDYVLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIRLGKQASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILVEV 228
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP11_ARATH (Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis thaliana GN=UBP11 PE=3 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.774e-33 Identity = 81/223 (36.32%), Postives = 126/223 (56.50%), Query Frame = 1 Query: 214 TPEEERVLIRDIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPRGECSTIRISKKETIGELHRRACSIFYLNLEQICIWDYYGHRKHALMN-DMDRTLDDANIQMDQDILVEV 879 TPEEER ++ ++ +EA KEG+ +F+I+ RW+ W +V L E F S S RP IDN D+++ +E + P++ L EG DY L+ QEVW +L WY GGP + RK+IS G +VEVY L L L + IR+SK+ +IG+L+ C+ + E+ IWDY+ +K L++ ++++++A +Q +QDIL+EV Sbjct: 18 TPEEERRIVTELNNEAEADLKEGNLYFVISNRWYTRWQRFVGL-----------LTEEFRSGEPSEVTRPGPIDNHDIID---SESDASDPQLRMMLEEGVDYTLVQQEVWRKLVKWYKGGPPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDESTTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQDILLEV 226
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP15_MOUSE (Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19 Identity = 66/216 (30.56%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 244 DIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWY---GGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPR-GECSTIRISKKETIGELHRRACSIFYL-NLEQICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 DIA + S ++GDT++L++ RW++ W YV D + G + P IDNS L+ D A+ + + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L T R SK +TI + + IF + + ++ +W+ Y +N D T+ DA + Q +++E Sbjct: 15 DIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDGDAQ------SLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIE 212
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP15_HUMAN (Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19 Identity = 66/216 (30.56%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 244 DIAISSEASSKEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWY---GGGPTLARKVISSGLSQTELAVEVYPLRLQLLVMPR-GECSTIRISKKETIGELHRRACSIFYL-NLEQICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 DIA + S ++GDT++L++ RW++ W YV D + G + P IDNS L+ D A+ + + L++ DYILLP E WN+L SWY G +ARKV+ G+ VEVY L+L T R SK +TI + + IF + + ++ +W+ Y +N D T+ DA + Q +++E Sbjct: 15 DIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQ------------NVYPGPIDNSGLLKDGDAQ------SLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFSIPDEKETRLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIE 212
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP4_MOUSE (Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16 Identity = 58/206 (28.16%), Postives = 100/206 (48.54%), Query Frame = 1 Query: 274 KEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQLLV-MPRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 + G ++LI+ RW++ W YV D + D ++ EH + P IDNS L +D ++ + + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L + SK +TI + + +F + E + +W+ Y + ++ +D T+ DA + Q +++E Sbjct: 29 QRGAQWYLIDSRWFKQWKKYVGFD----SWDMYNVGEH--------NLFPGPIDNSGLFSDPESQT------LKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVVDDGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTIQDAGLYQGQVLVIE 216
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP4_BOVIN (Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16 Identity = 58/206 (28.16%), Postives = 100/206 (48.54%), Query Frame = 1 Query: 274 KEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQLLV-MPRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 + G ++LI+ RW++ W YV D + D ++ EH + P IDNS L +D ++ + + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L + SK +TI + + +F + E + +W+ Y + ++ +D T+ DA + Q +++E Sbjct: 29 QRGAQWYLIDSRWFKQWKKYVGFD----SWDMYNVGEH--------NLYPGPIDNSGLFSDPESQT------LKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIE 216
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP4_HUMAN (Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 9.780e-16 Identity = 58/206 (28.16%), Postives = 100/206 (48.54%), Query Frame = 1 Query: 274 KEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQLLV-MPRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 + G ++LI+ RW++ W YV D + D ++ EH + P IDNS L +D ++ + + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L + SK +TI + + +F + E + +W+ Y + ++ +D T+ DA + Q +++E Sbjct: 29 QRGAQWYLIDSRWFKQWKKYVGFD----SWDMYNVGEH--------NLFPGPIDNSGLFSDPESQT------LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIE 216
BLAST of FC878529 vs. ExPASy Swiss-Prot
Match: UBP4_PONAB (Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15 Identity = 57/206 (27.67%), Postives = 100/206 (48.54%), Query Frame = 1 Query: 274 KEGDTFFLINQRWWQHWIDYVNQDQPNNTGDGSSLLEHFNSAGSSASKRPSGIDNSDLVNDATAEDPGAGPEIVDTLLEGRDYILLPQEVWNQLHSWYG---GGPTLARKVISSGLSQTELAVEVYPLRLQLLV-MPRGECSTIRISKKETIGELHRRACSIFYLNLE-QICIWDYYGHRKHALMNDMDRTLDDANIQMDQDILVE 876 + G ++LI+ RW++ W YV + D ++ EH + P IDNS L +D ++ + + L++ DY+L+P E WN+L +WYG G + RKV+ GL VEVY L L+L + SK +TI + + +F + E + +W+ Y + ++ +D T+ DA + + Q +++E Sbjct: 29 QRGAQWYLIDSRWFKQWKKYVGF----GSWDMYNVGEH--------NLFPGPIDNSGLFSDPESQT------LKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAEREARLWNKYMSNTYEQLSKLDNTVQDAGLYLGQVLVIE 216 The following BLAST results are available for this feature:
BLAST of FC878529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878529 ID=FC878529; Name=FC878529; organism=Citrus clementina; type=EST; length=882bpback to top |