FC878537
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_HELAN (Seryl-tRNA synthetase OS=Helianthus annuus PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.369e-52 Identity = 99/142 (69.72%), Postives = 120/142 (84.51%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHT 436 N+INK++++L++ G D S ++ T E K +A K+ EV+EA A+ +KLE VGNLVHDSVPVSNDEA+NA+VRTWGE+R E LKNHVELVELLGIADLKKGA++AGGRG+YLKGDGVRLNQALINFGLDFLEK+ YT L T Sbjct: 57 NRINKEVAKLRISGGDASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVPVSNDEADNAVVRTWGERREETNLKNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLNQALINFGLDFLEKRKYTALQT 198
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_ARATH (Seryl-tRNA synthetase OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.859e-47 Identity = 93/141 (65.96%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP---KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYT 424 NK+NKQ++QLK+ +D SE++ +T + KQ S KE EVREA+AA+KAKLE VGNLVHDSVPV DEANN +++ WGEKR KLKNHV+LVELLGIAD K+GA+IAG RGF+LKGDG+ LNQALINFGL FL+K+ +T Sbjct: 57 NKLNKQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDKDEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLNQALINFGLTFLKKRGFT 197
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYSC_DICDI (Seryl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=serS PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.578e-24 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 2 Query: 14 KINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHT 436 K+NK ++ K G+ E++ + E+ Q + EV E ++ KL +GN+VH+SVP+ N+E NN I++TWGE +T L +H EL+E++ D ++G ++G R ++LKG GV LNQA+INF L + K+ L T Sbjct: 59 KLNKSVAMKKKAGESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPIDNNEDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQAIINFALMHMTKRGSVPLQT 199
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_AQUAE (Seryl-tRNA synthetase OS=Aquifex aeolicus GN=serS PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.296e-22 Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSY 421 NK++K+I +LK GKD +E+ + E+K++ E E+R+ +K L + NL H SVPV DE +N VR WGE R EP K H E+ E LGI D K+GA ++G R + G G RL +ALINF LD KK Y Sbjct: 54 NKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGEDEKDNVEVRRWGEPRKFDFEP--KPHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLERALINFMLDLHTKKGY 191
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_NITMS (Seryl-tRNA synthetase OS=Nitrosopumilus maritimus (strain SCM1) GN=serS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.250e-21 Identity = 55/141 (39.01%), Postives = 86/141 (60.99%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGE-KRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 430 N+I +I+Q K G+D S ++ + + + A E + E + V NLVH+SVPV D+ N +R WGE + + K+ +H+++ E L + DL++ A +AG R +YLK D VRLNQ+LI+F LDFL +K Y+L+ Sbjct: 52 NEIGNEIAQKKKAGEDTSTILDEMKNVSAELAKLESQQEEIESKYAKLAFTVPNLVHESVPVGPDDTANKEMRKWGEIPQFDFKINDHIDMSENLDLVDLERAAKVAGARFYYLKNDLVRLNQSLIHFALDFLAEKEYSLV 192
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_THETN (Seryl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=serS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.404e-19 Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 2 NHLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF-LEKKSY 421 N N + I++LK GKD SE++ K E+ + D E E+RE ++ L + N+ H+SVP+ + +N VR WGE R EP K H E+ E LGI D + + + G R + KG G RL +ALINF LD +EK Y Sbjct: 49 NKRNTESDNIARLKREGKDASELIAKMKELSDKIKDMEQELREIEEEMEKILWTIPNIPHESVPIGESDEDNVEVRRWGEPRKFDFEP--KPHWEIGEALGILDFEAASRVTGSRFVFYKGLGARLERALINFMLDLHIEKHGY 190
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_CALS8 (Seryl-tRNA synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=serS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19 Identity = 51/142 (35.92%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF-LEKKSYTLL 430 N+ +K+I +LK GKD +E++ + E+ + + + +V+E ++ L + N+ H+SVP+ D+ N VR WGE R + ++K H E+ E LGI D ++ + ++G R + +G G RL +ALINF LD +EK Y L Sbjct: 52 NQKSKEIPKLKKEGKDTTELMNELKELSDKIKELDSQVKEVEDEIEKILLTIPNIPHESVPIGKDDTENVEVRRWGEPRVPDFEIKPHWEIGEKLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLHIEKHGYVEL 193
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYSC_SCHPO (Seryl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC29A4.15 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19 Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 8 LNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVV---GNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKN---HVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 430 +N++ K+I +D SE++ + N + ++ K+ + + A K L VV GN+VHDSVPVS DE NN I+R W + + KN H E++ L D ++G ++G RG++L+ GV N ALI +GLDFLEK+ Y L Sbjct: 56 INRVQKEIGLKMKAKEDASELLEEKNSLTER---KKNLIEQETAKNKEMLNVVSSIGNIVHDSVPVSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYGVFFNLALIQYGLDFLEKRGYIAL 199
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS_ANATD (Seryl-tRNA synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=serS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.916e-18 Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 2 Query: 11 NKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP--KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF-LEKKSYTLL 430 N+ +K++ +LK GKD ++++ + ++ + + + +V+E ++ L + N+ H+SVPV D+ N VR WGE R EP ++K H E+ LGI D ++ + ++G R + +G G RL +ALINF LD +EK YT L Sbjct: 52 NQKSKEVPKLKKEGKDVTDLMNELKDLSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDTENVEVRRWGEVR-EPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFMLDLHIEKHGYTEL 193
BLAST of FC878537 vs. ExPASy Swiss-Prot
Match: SYS1_ENTFA (Seryl-tRNA synthetase 1 OS=Enterococcus faecalis GN=serS1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.385e-18 Identity = 55/135 (40.74%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 5 HLNKINKQISQLKLFGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 400 H N+++ +I+QLK KD S+ + E+ +Q + EV A E + NL H+SVPV DEA N VR W +T EP K H E+ E LGI D ++GA ++G R Y KG G RL +A+ NF LD Sbjct: 51 HRNQVSGEIAQLKRAQKDASQQLLNMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADEAANVEVRRWSTPKTFSFEP--KPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNFMLD 183 The following BLAST results are available for this feature:
BLAST of FC878537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878537 ID=FC878537; Name=FC878537; organism=Citrus clementina; type=EST; length=580bpback to top |