FC878540

Overview
NameFC878540
Unique NameFC878540
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length881
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_DANRE (Macrophage erythroblast attacher OS=Danio rerio GN=maea PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.181e-37
Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIEL+R    + A+ +ARK+ +      + E+++VM  LAF S+T  + YK L +P +W  L+ QF+ +  +L+ +    +  I LQAGLSA+ TP CY++D T ++   P+  +S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERQETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRMDAVRHARKHFSQAEGGQLDEVRQVMGMLAFPSDTHISPYKDLLDPARWKMLIQQFRYDNYRLHQLGNNSVFTITLQAGLSAIKTPQCYKEDGTSKNPDCPVCSKSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_XENLA (Macrophage erythroblast attacher OS=Xenopus laevis GN=maea PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.542e-37
Identity = 79/178 (44.38%), Postives = 117/178 (65.73%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E    LAWC DNKSRL+K KS  EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++VM  LAF S+T  + YK L +P +W  L+ QF+ +  +L+ +    +  I LQAGLSA+ TP CY++D T ++   P+  +S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERQETMTCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQVMGMLAFPSDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTITLQAGLSAIKTPQCYKEDGTSKNPDCPVCSKSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_CHICK (Macrophage erythroblast attacher OS=Gallus gallus GN=MAEA PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.486e-37
Identity = 78/178 (43.82%), Postives = 117/178 (65.73%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E    LAWC DNKSRL+K KS  EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++VM  LAF S+T  + YK L +P +W  L+ QF+ +  +L+ +    +  I LQAGLSA+ TP CY++D + ++   P+  +S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERQETMTCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQVMGMLAFPSDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTITLQAGLSAIKTPQCYKEDGSSKNPDCPVCSKSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_RAT (Macrophage erythroblast attacher OS=Rattus norvegicus GN=Maea PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.652e-37
Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIELVR    L A+ +ARK+ +    + + E+++VM  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D + +    P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELVRQNKRLDAVRHARKHFSQAEGSQLDEVRQVMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNSSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_MOUSE (Macrophage erythroblast attacher OS=Mus musculus GN=Maea PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.652e-37
Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIELVR    L A+ +ARK+ +    + + E+++VM  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D + +    P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELVRQNKRLDAVRHARKHFSQAEGSQLDEVRQVMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNSSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_PONAB (Macrophage erythroblast attacher OS=Pongo abelii GN=MAEA PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.908e-36
Identity = 76/178 (42.70%), Postives = 114/178 (64.04%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++ M  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D + +    P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_MACFA (Macrophage erythroblast attacher OS=Macaca fascicularis GN=MAEA PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.908e-36
Identity = 76/178 (42.70%), Postives = 114/178 (64.04%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++ M  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D + +    P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_HUMAN (Macrophage erythroblast attacher OS=Homo sapiens GN=MAEA PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.908e-36
Identity = 76/178 (42.70%), Postives = 114/178 (64.04%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K KS  EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++ M  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D + +    P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNNSVFTLTLQAGLSAIKTPQCYKEDGSSKSPDCPVCSRSLNKLAQPLP 329          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: MAEA_BOVIN (Macrophage erythroblast attacher OS=Bos taurus GN=MAEA PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.804e-31
Identity = 76/216 (35.19%), Postives = 114/216 (52.78%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSK--------------------------------------FEFQLRLQEFIELVRGENNLRAITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCYEDDCTKED---PLSQESFRKLASPLP 859
            +DLV+IE+F  AK+V ++L+ +E A  LAWC DNKSRL+K K +                                       EF LR+QEFIEL+R    L A+ +ARK+ +    + + E+++VM  LAF  +T  + YK L +P +W  L+ QF+ +  +L+ +    +  + LQAGLSA+ TP CY++D +      P+   S  KLA PLP
Sbjct:  152 EDLVNIEMFLTAKEVEESLERRETATCLAWCHDNKSRLRKMKGRQSEHDAKTGRKSRVASGSPKESEDLGMETIKGKPELSCLEFSLRIQEFIELIRQNKRLDAVRHARKHFSQAEGSQLDEVRQVMGMLAFPPDTHISPYKDLLDPARWRMLIQQFRYDNYRLHQLGNSSVFTLTLQAGLSAIKTPQCYKEDGSSRSPDCPVCSRSLNKLAQPLP 367          
BLAST of FC878540 vs. ExPASy Swiss-Prot
Match: FYV10_EMENI (Protein fyv10 OS=Emericella nidulans GN=fyv10 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.384e-30
Identity = 68/190 (35.79%), Postives = 111/190 (58.42%), Query Frame = 2
Query:  335 KDLVDIEVFQEAKKVIDALQNKEVAPALAWCSDNKSRLKKSKSKFEFQLRLQEFIELVRGENNLR---AITYARKYLAPWGATHMKELQRVMATLAFKSNTECTTYKALFEPKQWDFLVDQFKQEFCKLYGMTLEPLLNIYLQAGLSALNTPYCY----------EDDCTKEDPLSQESFRKLASPLPYS 865
            ++LVD+ VF + +++ ++L+N E   AL WC++NK+ LKKS+   EF+LRLQ++IE++R  +  +   A+ +AR+YLAP+  T   E++R    LAF  NT    YK+++  ++W +L + F +   +L  +   PL++I L AGLSAL TP C+              T   P+      +LA  LPY+
Sbjct:  157 EELVDLNVFVQCQRIAESLRNGETKDALQWCNENKAALKKSQYNLEFELRLQQYIEMIRTRDRAKFVDAMVHARRYLAPYDETQSAEIRRAAGLLAFPPNTRAEPYKSMYASERWVYLSELFIRTHHELLSLPSRPLMHIALSAGLSALKTPACHSAYTSSSSNSHSTATSVCPICSTELNELARNLPYA 346          
The following BLAST results are available for this feature:
BLAST of FC878540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
MAEA_DANRE1.181e-3744.38Macrophage erythroblast attacher OS=Danio rerio GN... [more]
MAEA_XENLA1.542e-3744.38Macrophage erythroblast attacher OS=Xenopus laevis... [more]
MAEA_CHICK4.486e-3743.82Macrophage erythroblast attacher OS=Gallus gallus ... [more]
MAEA_RAT7.652e-3743.82Macrophage erythroblast attacher OS=Rattus norvegi... [more]
MAEA_MOUSE7.652e-3743.82Macrophage erythroblast attacher OS=Mus musculus G... [more]
MAEA_PONAB2.908e-3642.70Macrophage erythroblast attacher OS=Pongo abelii G... [more]
MAEA_MACFA2.908e-3642.70Macrophage erythroblast attacher OS=Macaca fascicu... [more]
MAEA_HUMAN2.908e-3642.70Macrophage erythroblast attacher OS=Homo sapiens G... [more]
MAEA_BOVIN4.804e-3135.19Macrophage erythroblast attacher OS=Bos taurus GN=... [more]
FYV10_EMENI2.384e-3035.79Protein fyv10 OS=Emericella nidulans GN=fyv10 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA85CD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA85CD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878540 ID=FC878540; Name=FC878540; organism=Citrus clementina; type=EST; length=881bp
AATTTTACTCGCAATGGAAATGGATTCGCTCCCAAACGGAAACTCAGCCG
CCGCCTCTCCACCGCAGAACCCCACCCCAGCCGCCGCAGGTGGCATGACG
CCGTTTCCGAAACTGACTCAATTAACCGAAGCTCTAAAACTCGAGCACCA
ATTTCTAAGAGTTCCCTTCGAGCACTACAAGAAGACTATACGAACCGACC
ACCGTGCCGTCGAGAAAGAAATTACGTCCGTTATTTCCAACGTCGCTGAC
GTTTCCGATTCCGAAAACTTCTCCAAAGACGACGCCGTAAATCACCTCAC
CTCTCTCGTTTCAAGACTCCAAGGGCTCAAACGCAAGGATCTTGTTGATA
TTGAGGTATTCCAAGAAGCAAAAAAGGTTATTGATGCTCTTCAAAATAAG
GAGGTAGCCCCTGCTTTAGCCTGGTGTTCTGATAATAAATCAAGGTTGAA
GAAGTCTAAGAGCAAATTTGAATTTCAGTTGAGACTGCAAGAGTTCATAG
AGTTAGTAAGAGGCGAAAACAACTTGCGTGCCATTACATATGCTCGAAAG
TACCTTGCACCATGGGGAGCTACCCATATGAAAGAATTGCAGCGGGTTAT
GGCAACCTTGGCTTTTAAGAGTAATACTGAGTGCACCACATACAAGGCTT
TGTTTGAACCAAAGCAATGGGATTTCTTGGTCGACCAATTTAAACAGGAA
TTCTGCAAGTTATATGGCATGACACTAGAGCCATTATTAAATATTTATCT
GCAAGCTGGCTTATCTGCCCTAAACACTCCATACTGTTATGAAGATGATT
GTACCAAGGAGGACCCCCTGTCACAGGAGAGCTTCCGAAAGCTAGCATCA
CCATTGCCATACTCNTAGCAGCATCACTCGG
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