FC878541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN1_RAT (Protein ERGIC-53 OS=Rattus norvegicus GN=Lman1 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.529e-49 Identity = 102/270 (37.78%), Postives = 159/270 (58.89%), Query Frame = 2 Query: 29 LILAPSLFLAFNLFGSDTDPIFQVDERFE---RRKQLVHSFKNPFYLVR--GTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSALGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDNPSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTK---LQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRLGEQGRREDTPNAD 805 L+L+ S F+ + G D + E RR + +SFK P +LV+ GT+ FWA +G+ + + D +R+ P+ KS+ G++W F NWEVE++F+V +GADG A+WYT+ +GP+FG+ D W+G+G+ FD+FDNDG +NP+I V N+G +Y+ DG Q+L C+ +RN Y + K+TY L ++ ++ND+ C V + +P+ +FG++AATGGL D+HDV F +L E G+ TP D Sbjct: 20 LLLSFSQFVGSDGMGGDAAAPGAAGTQAELPHRRFEYKYSFKGP-HLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPEKD 288
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN1_HUMAN (Protein ERGIC-53 OS=Homo sapiens GN=LMAN1 PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.751e-48 Identity = 93/238 (39.08%), Postives = 148/238 (62.18%), Query Frame = 2 Query: 116 RRKQLVHSFKNPFYLVR--GTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSALGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDNPSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTK---LQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRLGEQGRREDTPNAD 805 RR + +SFK P +LV+ GT+ FWA +G+ + ++D +R+ P+ KS+ G++W F NWEVE++F+V +GADG A+WY + EGP+FG+ D W+G+G+ FD+FDNDG +NP+I + N+G Y+ DG Q+L C+ +RN Y + K+TY + L ++ ++ND+ C V + +P+ +FG++AATGGL D+HDV F +L E G+ TP+ + Sbjct: 44 RRFEYKYSFKGP-HLVQSDGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKTKAAFENWEVEVTFRVTGRGRIGADGLAIWYAENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRAKITYYQNTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKE 280
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN1_MOUSE (Protein ERGIC-53 OS=Mus musculus GN=Lman1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.902e-48 Identity = 94/238 (39.50%), Postives = 146/238 (61.34%), Query Frame = 2 Query: 116 RRKQLVHSFKNPFYLVR--GTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSALGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDNPSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTK---LQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRLGEQGRREDTPNAD 805 RR + +SFK P +LV+ GT+ FWA +G+ + + D +R+ P+ KS+ G++W F NWEVE++F+V +GADG A+WYT+ +GP+FG+ D W+G+G+ FD+FDNDG +NP+I V N+G +Y+ DG Q+L C+ +RN Y + K+TY L ++ ++ND+ C V + +P+ +FG++AATGGL D+HDV F +L E G+ T D Sbjct: 52 RRFEYKYSFKGP-HLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKAKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQGLDGPVFGSADTWNGVGIFFDSFDNDGKKNNPAIVVIGNNGQINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTAEKD 288
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN1_CERAE (Protein ERGIC-53 OS=Cercopithecus aethiops GN=LMAN1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.902e-48 Identity = 93/238 (39.08%), Postives = 147/238 (61.76%), Query Frame = 2 Query: 116 RRKQLVHSFKNPFYLVR--GTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSALGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDNPSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTK---LQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRLGEQGRREDTPNAD 805 RR + +SFK P +LV+ GT+ FWA +G+ + ++D +R+ P+ KS+ G++W F NWEVE++F+V +GADG A+WYT+ EGP+FG+ D W+G+G+ FD+FDNDG +NP+I + N+G Y+ DG Q+L C+ +RN Y + K+ Y L ++ ++ND+ C V + +P+ +FG++AATGGL D+HDV F +L E G+ TP+ + Sbjct: 44 RRFEYKYSFKGP-HLVQSDGTVPFWAHAGNAIPSSDQIRVAPSLKSQRGSVWTKAKAAFENWEVEVTFRVTGRGRIGADGLAIWYTENQGLEGPVFGSADLWNGVGIFFDSFDNDGKKNNPAIVIIGNNGQIHYDHQNDGASQALASCQRDFRNKPYPVRAKIIYYQKTLTVMINNGFTPDKNDYEFCAKVENMIIPAQGHFGVSAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKE 280
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN2_HUMAN (Vesicular integral-membrane protein VIP36 OS=Homo sapiens GN=LMAN2 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42 Identity = 94/248 (37.90%), Postives = 146/248 (58.87%), Query Frame = 2 Query: 47 LFLAFNLFGSDTDPIFQVDERFERRKQLVHSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN--PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTVS-ANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 LFL L GS T I + +R+ HS P+ V ++ W GST++T+ YVRLTP E+S+ G+IWN +P +WE+ + FKV T L DG A+WYT++ GP+FG++D + GL + DT+ ND +++ P I+V N+GS SY+ +DG+ L C +RN ++T + + Y RL ++T L+++N+W C ++ LP+GYYFG +A TG L DNHD+ ++ +L Sbjct: 33 LFLLL-LLGSVTADITDGNSEHLKRE---HSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN2_CANFA (Vesicular integral-membrane protein VIP36 OS=Canis familiaris GN=LMAN2 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42 Identity = 85/219 (38.81%), Postives = 134/219 (61.19%), Query Frame = 2 Query: 134 HSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN--PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTVS-ANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 HS P+ V ++ W GST++T+ YVRLTP E+S+ G+IWN +P +WE+ + FKV T L DG A+WYT++ GP+FG++D + GL + DT+ ND +++ P I+V N+GS SY+ +DG+ L C +RN ++T + + Y RL ++T L+++N+W C ++ LP+GYYFG +A TG L DNHD+ ++ +L Sbjct: 58 HSLIKPYQGVGSSSMPLWDFQGSTILTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMAN2_MOUSE (Vesicular integral-membrane protein VIP36 OS=Mus musculus GN=Lman2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.178e-42 Identity = 85/219 (38.81%), Postives = 134/219 (61.19%), Query Frame = 2 Query: 134 HSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN--PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTVS-ANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 HS P+ V ++ W GST++T+ YVRLTP E+S+ G+IWN +P +WE+ + FKV T L DG A+WYT++ GP+FG++D + GL + DT+ ND +++ P I+V N+GS SY+ +DG+ L C +RN ++T + + Y RL ++T L+++N+W C ++ LP+GYYFG +A TG L DNHD+ ++ +L Sbjct: 60 HSLIKPYQGVGSSSMPLWDFQGSTMLTSQYVRLTPDERSKEGSIWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWSELAGCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISIKLFQL 278
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMA2L_PONAB (VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.244e-38 Identity = 89/250 (35.60%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 47 LFLAFNLFGSDTDPI-FQVDERFERRKQLVHSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN---PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 + L L GS P + FE K+ HS P+ V G+ S W G+ ++ Y+RLTP +S+ G +WN P +WE+++ FK+ L DG A+WYTK+ + GP+FGN D++ GLGV DT+ N+ P I+ N+GS SY+ +DG+ LG C RN Y+T + + Y+ L I+ + +++W C V LP GYYFG ++ TG L DNHDV ++ L Sbjct: 26 MLLLLLLLGSGQGPQQVGAGQTFEYLKR-EHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMA2L_HUMAN (VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.244e-38 Identity = 89/250 (35.60%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 47 LFLAFNLFGSDTDPI-FQVDERFERRKQLVHSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN---PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 + L L GS P + FE K+ HS P+ V G+ S W G+ ++ Y+RLTP +S+ G +WN P +WE+++ FK+ L DG A+WYTK+ + GP+FGN D++ GLGV DT+ N+ P I+ N+GS SY+ +DG+ LG C RN Y+T + + Y+ L I+ + +++W C V LP GYYFG ++ TG L DNHDV ++ L Sbjct: 26 MLLLLLLLGSGQGPQQVGAGQTFEYLKR-EHSLSKPYQGVGTGSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274
BLAST of FC878541 vs. ExPASy Swiss-Prot
Match: LMA2L_BOVIN (VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 87/250 (34.80%), Postives = 131/250 (52.40%), Query Frame = 2 Query: 47 LFLAFNLFGSDTDPI-FQVDERFERRKQLVHSFKNPFYLV-RGTISFWASSGSTVITNDYVRLTPAEKSRAGTIWNTKPTTFHNWEVEMSFKVGSTSA--LGADGFAMWYTKESRKEGPIFGNQDQWDGLGVVFDTFDNDGSSDN---PSINVFRNDGSWSYNSGQDGKHQSLGQCRLYYRN--YETQIKMTYIDSRLQILTKLQNQNDWSVCTTV-SANLPSGYYFGLTAATGGLVDNHDVYKFEVTRL 766 + L L GS P + FE K+ HS P+ V + S W G+ ++ Y+RLTP +S+ G +WN P +WE+++ F++ L DG A+WYTK+ + GP+FGN D++ GLGV DT+ N+ P I+ N+GS SY+ +DG+ LG C RN Y+T + + Y+ L I+ + +++W C V LP GYYFG ++ TG L DNHDV ++ L Sbjct: 26 MLLLLLLLGSGQGPRQVGAGQTFEYLKR-EHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLRDWELQVHFRIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQQERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNLHYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274 The following BLAST results are available for this feature:
BLAST of FC878541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878541 ID=FC878541; Name=FC878541; organism=Citrus clementina; type=EST; length=824bpback to top |