FC878553

Overview
NameFC878553
Unique NameFC878553
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length838
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.009e-99
Identity = 170/232 (73.28%), Postives = 203/232 (87.50%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            F VFGDSLVDNGNN++LATTARAD+ PYGID+PT RPTGRFSNGLNIPD IS+H+G E  +PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +Q EYF++Y+ RV+ L+G +   +LVNGAL+LIT+GGNDFVNNYYLVP+SARSRQFSLPDYV +VISEYRK+L +++DLGARRVLVTGTGP+GCVPAE A R RNG+CA +L RAA L+NPQL+Q++ DLN
Sbjct:   31 FLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQYKVRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLN 262          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 5.538e-98
Identity = 173/232 (74.57%), Postives = 199/232 (85.78%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            FFVFGDSLVDNGNN+YL TTARAD+ PYGIDYPTRRPTGRFSNGLNIPD IS+ IG   TLPYLSP LTG  LLVGANFASAGIGILNDTGIQFVNIIR+ +Q EYF++YQ RV+ALIGP+ T+QLVN AL+LIT+GGNDFVNNYYL+P+SARSRQ++LPDYV Y+ISEY K+L +L++LGARRVLVTGTG +GC PAE A   RNG+C   L  AA L+NPQLV L+  +N
Sbjct:   30 FFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPSTLPYLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQALVLITLGGNDFVNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAPAELAQHSRNGECYGALQTAAALFNPQLVDLIASVN 261          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 3.039e-96
Identity = 172/234 (73.50%), Postives = 202/234 (86.32%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSE-PTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRG-RNGQCAADLXRAADLYNPQLVQLVKDLN 837
            FFVFGDSLVD+GNNNYL TTARADSPPYGID+PTRRPTGRFSNGLNIPD IS+ IG+E P LPYLSPEL G  LL GANFASAGIGILNDTG QF+NIIRM++Q +YFQ+YQ RV+ LIG  +T++LV+ AL+LITVGGNDFVNNY+L PYSARSRQF+LPDYV+ +ISEY+K+L RL+ LG  RVLVTG GPLGC PAE A  G  NG+C+A+L RAA LY+PQL+Q++ +LN
Sbjct:   29 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMYQQLDYFQQYQQRVSRLIGKPQTQRLVSQALVLITVGGNDFVNNYFLFPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAELARSGTSNGRCSAELQRAASLYDPQLLQMINELN 262          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 4.107e-93
Identity = 166/233 (71.24%), Postives = 200/233 (85.84%), Query Frame = 1
Query:  142 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGR-NGQCAADLXRAADLYNPQLVQLVKDLN 837
            FFVFGDSLVD+GNNNYL TTARADSPPYGIDYPT RPTGRFSNGLN+PD IS+ IGSEPTLP LSPELTG +LL+GANFASAGIGILNDTG+QF+NI+R+ RQFE FQEYQ RV+ +IG  +T+QLVNGAL+L+T+GGNDFVNNY+  P S R RQ SL ++ + +ISEY+K+LT L++LGARRV+VTGTGPLGCVPAE A  G  NG+CA +  +AA ++NP LVQ+++ LN
Sbjct:   32 FFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSEPTLPILSPELTGEKLLIGANFASAGIGILNDTGVQFLNILRIGRQFELFQEYQERVSEIIGSDKTQQLVNGALVLMTLGGNDFVNNYFF-PISTRRRQSSLGEFSQLLISEYKKILTSLYELGARRVMVTGTGPLGCVPAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLN 263          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.869e-45
Identity = 103/234 (44.02%), Postives = 142/234 (60.68%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGS-EPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPD-YVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNG-QCAADLXRAADLYNPQLVQLVKDLN 837
            FVFGDSLVD GNNNYLAT ++A+  P GID+ +  PTGRF+NG  I D + Q +GS E T PYL+P  +GS +L G N+AS G GILN TG  F   I +  Q + F   +  + + IG     +L   A+  +T G ND +NNY+    S   R+   P+ +V  +IS++R  LTRL+ LGAR+++V   GP+GC+P ER      G  C A+    A +YN +L  LV++LN
Sbjct:   32 FVFGDSLVDAGNNNYLATLSKANYVPNGIDFGS--PTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSVTTGSNDLINNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAEPNEVAQMYNLKLKTLVEELN 263          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.934e-42
Identity = 99/234 (42.31%), Postives = 144/234 (61.54%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRR--PTGRFSNGLNIPDFISQHIGSEP-TLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLV-NGALILITVGGNDFVNNYYLVPY-SARSRQFSLPD-YVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADL-XRAADLYNPQLVQLV 825
            FVFGDSLVD GNNNYL T +RA+SPP GID+   R  PTGRF+NG  I D + + +G +   +PYL+P  +G  LL G N+AS G GILN TG  FVN + M  Q +YF   + +   L+G  + +  +   +L  + +G NDF+NN YLVP+ +A++R    P+ +V  +IS  R  L RL+D+ AR+ +V    P+GC+P ++++   N +   DL  + A  YN +L  L+
Sbjct:   36 FVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFLNN-YLVPFVAAQARLTQTPETFVDDMISHLRNQLKRLYDMDARKFVVGNVAPIGCIPYQKSINQLNDKQCVDLANKLAIQYNARLKDLL 268          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 93/232 (40.09%), Postives = 138/232 (59.48%), Query Frame = 1
Query:  148 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLP-YLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRNG-QCAADLXRAADLYNPQLVQLVKDLN 837
            VFGDS VD+GNNN+++T ARA+  PYG D+P  R TGRF NG    DF S+  G +PT+P YL P    S    G  FASAG G  N T    + +I ++++ EYF+EYQ+ ++A +G +R  +++  +L ++++G NDF+ NYY +P   R  QFS+  Y  +++      L  ++ LGAR++  TG  P+GC+P ER     +   CA      A  +N +L +LV  LN
Sbjct:   31 VFGDSSVDSGNNNFISTMARANFEPYGRDFPGGRATGRFCNGRLSSDFTSEAYGLKPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTA-DVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLYIVSIGTNDFLENYYTLP--DRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSYNDLAVDFNGRLRRLVTKLN 259          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.793e-41
Identity = 90/232 (38.79%), Postives = 138/232 (59.48%), Query Frame = 1
Query:  148 VFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLP-YLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMR-GRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            VFGDS VD GNNNY+ T AR++  PYG D+   +PTGRF NG    DF+S+ +G +P +P YL P    S    G  FASA  G  N T    ++++ +++Q EY++EYQ ++ A  G  R  + +  +L LI++G NDF+ NY+  P   RS Q+S+  Y  ++    ++ + +LH LGAR++ + G  P+GC+P ERA   G  G+C       A  +N +L ++V+ L+
Sbjct:   31 VFGDSSVDAGNNNYIPTVARSNFEPYGRDFVGGKPTGRFCNGKIATDFMSEALGLKPIIPAYLDPSYNISDFATGVTFASAATGYDNATS-DVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFP--GRSSQYSVSLYQDFLAGIAKEFVKKLHGLGARKISLGGLPPMGCMPLERATNIGTGGECVGRYNDIAVQFNSKLDKMVEKLS 259          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.128e-41
Identity = 91/237 (38.40%), Postives = 141/237 (59.49%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTR--RPTGRFSNGLNIPDFISQHIGSEP-TLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQ-LVNGALILITVGGNDFVNNYYLVPYSARSRQFSLP-DYVKYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMRGRN-GQCAADLXRAADLYNPQLVQLVKDLN 837
            F+FGDSLVD GNNNYL+T +RA+  P GID+      PTGRF+NG  I D + + +GS    +P+L+P+  G  LL G N+AS G GI+N TG  FVN + M  Q ++F   + +   L+G ++ K  +   ++  IT+G NDF+NNY     S  +R    P D++  ++   R  LTRL+ L AR+ ++   GP+GC+P ++ +   +  +C     + A+ YN +L  L+++LN
Sbjct:   50 FIFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNNYLFPLLSVGTRFTQTPDDFIGDMLEHLRDQLTRLYQLDARKFVIGNVGPIGCIPYQKTINQLDENECVDLANKLANQYNVRLKSLLEELN 286          
BLAST of FC878553 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.365e-40
Identity = 92/237 (38.82%), Postives = 137/237 (57.81%), Query Frame = 1
Query:  145 FVFGDSLVDNGNNNYLATTARADSPPYGIDYPTR--RPTGRFSNGLNIPDFISQHIGSE-PTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYV--KYVISEYRKLLTRLHDLGARRVLVTGTGPLGCVPAERAMR-GRNGQCAADLXRAADLYNPQLVQLVKDLN 837
            F+FGDSLVD GNNNY+ T ++ADS PYGID+     +PTGRF+NG  I D + + +G++ P  PYL P    + +  G N+AS   GIL+DTG+ F+  + +  Q   F++ +  +  +IG   TK+++  A+  IT+G ND +N  Y+ P      Q  LP  V    ++      L RLH LG R+ +V G GPLGC+P  RA+     G+C+  + +    YN +L+  +K LN
Sbjct:   27 FIFGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDILN--YIQPSIPFFSQDKLPTDVLQDSMVLHLTTHLKRLHQLGGRKFVVVGVGPLGCIPFARALNLIPAGKCSEQVNQVVRGYNMKLIHSLKTLN 261          
The following BLAST results are available for this feature:
BLAST of FC878553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GDL79_ARATH5.009e-9973.28GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
LTL1_ARATH5.538e-9874.57GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL77_ARATH3.039e-9673.50GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
GDL67_ARATH4.107e-9371.24GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL64_ARATH1.869e-4544.02GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL58_ARATH1.934e-4242.31GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL48_ARATH2.793e-4140.09GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL34_ARATH2.793e-4138.79GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL38_ARATH8.128e-4138.40GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL81_ARATH2.365e-4038.82GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA73AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA73AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878553 ID=FC878553; Name=FC878553; organism=Citrus clementina; type=EST; length=838bp
CACAGCAAGCTTAGATTTTCTAGGATTCGCGTTAAATATAATACAATGGC
AAGCTCATTTGTTTTTGGTGTACGGACAATTTTAGGTCTTGTGATGGCAT
TGGGAGCTTTGGCTCCTCAAGCTGCGGAGGCCGCTCGTGCTTTCTTTGTG
TTTGGTGATTCACTTGTTGACAATGGCAACAATAACTACTTGGCCACCAC
TGCTCGGGCTGATTCTCCACCGTACGGCATTGATTATCCGACTCGCCGAC
CCACAGGAAGATTCTCCAATGGCCTAAACATTCCTGATTTCATCAGTCAG
CACATTGGTTCGGAGCCCACATTGCCGTATTTGAGTCCAGAGCTCACTGG
GTCTAGACTACTTGTTGGAGCCAATTTTGCTTCTGCTGGAATTGGAATAC
TCAATGACACAGGAATTCAATTTGTAAACATAATTAGAATGTTCAGGCAA
TTCGAATACTTCCAAGAATATCAGAACCGGGTTACAGCTTTAATCGGACC
GCAGCGGACTAAGCAACTTGTTAATGGAGCACTCATCCTCATCACTGTCG
GTGGCAATGACTTTGTCAATAACTATTACTTGGTTCCCTACTCTGCAAGA
TCTCGTCAGTTTTCTCTACCGGATTACGTCAAATATGTCATCTCCGAGTA
CAGAAAACTTTTAACGAGGCTACACGACCTTGGAGCAAGAAGGGTTTTGG
TTACCGGAACCGGGCCGTTGGGGTGTGTTCCGGCAGAGCGAGCTATGCGG
GGCAGAAATGGACAGTGCGCTGCTGATCTTNCACGAGCTGCCGATTTGTA
TAATCCTCAACTTGTTCAATTGGTTAAAGATCTGAATA
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