FC878590

Overview
NameFC878590
Unique NameFC878590
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length918
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.700e-42
Identity = 95/227 (41.85%), Postives = 135/227 (59.47%), Query Frame = 3
Query:  228 VKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 908
            +K FV GG+A +++   THP+D +KVRMQLQGE   V                                    P+ G + + V I QTEG   L+ G+SA++LRQ  Y+TTR GLYD++K     KD   +  ++K+  G++SGA GA VG PAD+ MVRMQADG+LP   RRNYK+V D I ++ ++EG+ SLW+G S  + RAM +TA Q+++YDQ K+++L  G
Sbjct:   25 LKQFVIGGLAGMLSSAFTHPIDSLKVRMQLQGEGTGVG-----------------------------------PKRGALKMLVHINQTEGFFTLYKGLSASLLRQATYTTTRFGLYDLIKDI-VAKDDKPLPFTQKIMVGMLSGAGGAIVGTPADLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASG 215          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 5.296e-36
Identity = 87/224 (38.84%), Postives = 126/224 (56.25%), Query Frame = 3
Query:  237 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 908
            F+ GG+A + A     PLDL+K RMQL GE     +   S      FH+ ++                             I +TEG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  D        K   G+ +GA GA VG PA+VA++RM ADGRLP  QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTS------FHALTS-----------------------------ILKTEGLKGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALVRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSG 213          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 2.013e-35
Identity = 86/224 (38.39%), Postives = 125/224 (55.80%), Query Frame = 3
Query:  237 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 908
            F+ GG+A + A     PLDL+K RMQL GE     +   S      FH+ ++                             I + EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  D        K   G+ +GA GA VG PA+VA++RM ADGRLP  QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTS------FHALTS-----------------------------ILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSG 213          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.483e-35
Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 3
Query:  237 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 908
            F+ GG+A + A     PLDL+K RMQL GE     +   S      FH+                              + I + EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  D        K   G+ +GA GA VG PA+VA++RM ADGRLP  QRR YK+V +A+ +++++EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTS------FHAL-----------------------------ISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSG 213          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 2.225e-34
Identity = 85/224 (37.95%), Postives = 124/224 (55.36%), Query Frame = 3
Query:  237 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 908
            F+ GG+A + A     PLDL+  RMQL GE     +   S      FH+ ++                             I + EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  D        K   G+ +GA GA VG PA+VA++RM ADGRLP  QRR YK+V +A+ ++ R+EGV +LWRG   T+ RA++V A+QLA+Y Q K+ +L  G
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVXNRMQLSGEGAKTREYKTS------FHALTS-----------------------------ILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGPPAEVALIRMTADGRLPADQRRGYKNVFNALIRIAREEGVPTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSG 213          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.750e-31
Identity = 73/223 (32.74%), Postives = 114/223 (51.12%), Query Frame = 3
Query:  246 GGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVM 914
            GG+AS  A C THPLDL+KV +Q Q E                                         ++    + +++ +T+G  AL++G+SA++ RQ  YS TR  +Y+ ++   T      +    KV  G ISG  G  VG PAD+  VRMQ D +LPP+QRRNY   +D + ++ R+E +  L+ G+++  +R  +VT  QL+ YDQ K+++L  G +
Sbjct:   12 GGLASCGAACCTHPLDLLKVHLQTQQE----------------------------------------VKLRMTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYL 194          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.750e-31
Identity = 72/223 (32.29%), Postives = 114/223 (51.12%), Query Frame = 3
Query:  246 GGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVM 914
            GG+AS  A C THPLDL+KV +Q Q E                                         ++    + +++ +T+G+ AL+SG+SA++ RQ  YS TR  +Y+ ++ +        +    KV  G +SG  G  VG PAD+  VRMQ D +LP  QRRNY   +D + ++ R+EG+  L+ G+++  +R  +VT  QL+ YDQ K+++L  G +
Sbjct:   13 GGLASCGAACCTHPLDLLKVHLQTQQE----------------------------------------VKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYL 195          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.672e-30
Identity = 76/223 (34.08%), Postives = 119/223 (53.36%), Query Frame = 3
Query:  237 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNR---MTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMI 896
            F+ GG++ +VA     P+D+IKVR+QL GE  A                                     P+  P+ V   I  +     L++G+SA +LRQ +Y+T R+G +D    + + +   +   +    + +AGL +G + A +GNPAD+A++RMQ+DG  P A+R+NYKSVIDA+  + R EGVA+LW G++ TV RAM +   QLA + + K  +
Sbjct:   45 FINGGLSGMVATTVIQPIDMIKVRIQLAGEGKAGG-----------------------------------PKPTPLGVTRDIIASGKAMDLYTGLSAGLLRQAVYTTARIGCFDTFMSRLSARAKEKGQSVGFKERASAGLAAGGLAAMIGNPADLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLAFFSEAKAQL 232          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 74/232 (31.90%), Postives = 126/232 (54.31%), Query Frame = 3
Query:  222 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMR 917
            +G+K F+ GG++ + A   ++P+D++K R Q+ GE +                        S S+             G ++  +KI + EG++A++ G++ ++LR+  YST RMG YDV+K  + D +     LS KV +G +SGA+GA + +P D+  VRMQA  +        Y S+  A  +++ +EG+  LW+G   T  RA ++TASQ+ +YD +K MIL  G+++
Sbjct:    7 IGIK-FLFGGLSCMGAAVVSNPVDVLKTRFQIHGEGI-----------------------DSKSL-------------GLVNGTIKIIKNEGISAMYKGLTPSLLREATYSTLRMGGYDVIKNYFIDSNGKTNLLS-KVTSGALSGALGACITSPTDLIKVRMQASSK-----GVKYDSISSAFKEIIAKEGIKGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQ 195          
BLAST of FC878590 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.230e-26
Identity = 79/228 (34.65%), Postives = 114/228 (50.00%), Query Frame = 3
Query:  231 KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALAFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVM 914
            K F+ GG+ASI A C T P+DL K R+Q+QG+                  +N A               E+  R G +   V+I++ EGV AL+SG++  +LRQ  Y T ++G Y  LK+ + D   +  TL   V  G++SG V + + NP DV  +RMQA G L          +I     + +QEG   LW+G SLT  RA IV   +L  YD  K+ ++  G+M
Sbjct:    7 KPFIYGGLASITAECGTFPIDLTKTRLQVQGQ------------------ANDAKY------------KEIRYR-GMLHAIVRIWKEEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDE-TLVINVFCGVLSGVVSSCIANPTDVLKIRMQAQGSLIQG------GMIGNFINIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLM 196          
The following BLAST results are available for this feature:
BLAST of FC878590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
M2OM_DICDI1.700e-4241.85Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE5.296e-3638.84Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN2.013e-3538.39Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_BOVIN4.483e-3537.95Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_RAT2.225e-3437.95Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
DIC_MOUSE8.750e-3132.74Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
DIC_HUMAN8.750e-3132.29Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
M2OM_NEUCR5.672e-3034.08Putative mitochondrial 2-oxoglutarate/malate carri... [more]
UCPB_DICDI3.112e-2831.90Mitochondrial substrate carrier family protein ucp... [more]
KMCP1_XENTR2.230e-2634.65Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA69AG04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA69AG04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878590 ID=FC878590; Name=FC878590; organism=Citrus clementina; type=EST; length=918bp
CACATCCATTTCCGCGTGTGCGGCTTCGGTTTCTTTCCTCCTTCCTTTCT
GATTTCGCCTTCTCATTCTCTTTTCTCACTATAAATACTTCAATTCTCAT
TTCTTTACACACCATCAGCAAGCAAGCATTACTATTACATTACGCGCTTG
ACACTCTTCACTTTGTTTCCTGATCCTCCAATTTTTTTTTTAATTATTAT
TATTATTGTTATTTTTAAATCATGGGTGTTAAAGGATTTGTTGAGGGCGG
AATTGCTTCAATTGTAGCTGGTTGCTCTACACATCCTCTCGATCTAATTA
AAGTTCGCATGCAACTCCAAGGCGAAAACGTCGCCGTTCCCCAGCAAGTC
CACTCTCTCCGTCCGGCTCTGGCTTTTCATTCCAACTCAGCCACTGTCTT
TCCCTCTAATTCCATCCATATCCCCACCACCGCACCAGAGCTGCCGCCAC
GTGTCGGTCCTATCTCCGTCGGAGTCAAGATCTTTCAAACCGAAGGCGTC
GCCGCTTTGTTCTCTGGCGTTTCCGCCACCGTGCTGAGACAAACATTGTA
CTCCACCACTCGCATGGGGCTTTACGATGTGCTCAAACAAAAGTGGACTG
ACAAAGACTCCAACCGCATGACGTTGAGCCGCAAAGTAGCGGCCGGTTTG
ATCTCCGGAGCAGTTGGGGCCACGGTTGGCAACCCCGCTGACGTGGCAAT
GGTCCGCATGCAAGCCGACGGCCGCCTCCCACCGGCTCAGCGGCGTAACT
ACAAGAGCGTAATCGACGCGATCACGCAAATGTTGAGGCAAGAGGGGGTC
GCCAGTCTCTGGCGCGGATCATCGCTGACGGTGAACCGGGCGATGATCGT
GACGGCGTCGCAGCTGGCGACGTACGATCAGGTGAAGGAGATGATTCTGA
AGAAGGGGGTGATGAGGG
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