FC878593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.655e-34 Identity = 90/241 (37.34%), Postives = 123/241 (51.04%), Query Frame = 2 Query: 176 VTCALAPDMGVTSRDIVIDKFTNIWALFYVPILCQSTK---------------LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSKGSTELE 850 VT P GV S D++ID+ N+ + Y P + +P++++FHGG F SA + Y L C+++SVNYR APENP P AY+DG+ +L W+ ++ WL S++ + IFLAGDS+G NIAHNVALR G S V G IL+ P FGG RT SEK L + +++ D YW+ LP G +R+HP NP S LE Sbjct: 53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS---------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVL--------GNILLNPMFGGNERTESEKSL--DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLE 274
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.217e-31 Identity = 87/233 (37.34%), Postives = 118/233 (50.64%), Query Frame = 2 Query: 194 PDMGVTSRDIVIDKFTNIWALFYVPILCQSTK-------------LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSKGSTELE 850 P GV S D++ID+ TN+ + Y P ++ +P++V+FHGG F SA + Y L G +++SVNYR APEN P AY+DG+ L W+ S WL S++ + IFLAGDS+G NI HNVA+R S V G IL+ P FGG RT SEK L + +++ D YWR LP G +R+HP +P S LE Sbjct: 59 PVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWV---------NSSSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRIDVL--------GNILLNPMFGGTERTESEKRL--DGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLE 272
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.217e-29 Identity = 74/188 (39.36%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 290 LPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWL-SRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSKGSTELE 850 +P+L++FHGG F SA + Y F L G +++SV+YR +PE+ P AY+DG+ +L W+K + WL S + + ++LAGDS+G NIAHNVA+R N KV G IL+ P FGG+ RT SEK L + +++ D YWR LP G +RDHP NP L+ Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV---------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGVKVL--------GNILLHPMFGGQERTQSEKTL--DGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLK 274
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.038e-29 Identity = 75/202 (37.13%), Postives = 108/202 (53.47%), Query Frame = 2 Query: 293 PLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSKGSTELEQYCGLLPFA-TLVCIS 895 P++++FHGG F SA+ + Y K + +++SVNYR APE+ P AY+DG+T+L W+ Q GG + +FL+GDS+G NIAH+VA+R + KV G IL+ FGG RT SE+ L + ++L D YW+ LP ++RDHP NP L G LPFA +L+ +S Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ--------ARVFLSGDSSGGNIAHHVAVRAADEGVKVC--------GNILLNAMFGGTERTESERRL--DGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL----GGLPFAKSLIIVS 293
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: AAAD_HUMAN (Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13 Identity = 70/241 (29.05%), Postives = 105/241 (43.57%), Query Frame = 2 Query: 233 KFTNIWALFYVPILCQSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMW-LKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIA----------HNVALRLGNSNNKVATLKPL-------------TFKGTILIQPFFGGEARTNSEKYLAQPPRSALSLAASDTY----WRLALPRGSNRDHPWSNPMSKGSTEL-EQYCGLL 868 KF NI YVP L Y HGGG+CVGSAA S Y A + +++S NYRLAP+ P +ED + +L W L+++ + G N I ++GDSAG N+A +V ++L + L+PL F L+ F+ T+ A R + + +S + W LP + H ++NP + GS+EL ++Y G L Sbjct: 85 KFNNILVRVYVPKRKSEALRRGLFYIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLRKKVLAKYG---------VNPERIGISGDSAGGNLAAAVTQQLLDDPDVKIKLKIQSLIYPALQPLDVDLPSYQENSNFLFLSKSLMVRFWSEYFTTDRSLEKAMLSRQHVPVESSHLFKFINWSSLLPERFIKGHVYNNP-NYGSSELAKKYPGFL 315
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 2 Query: 236 FTNIWALFYVPILCQSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMW-LKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRL 610 F N+ YVP T L Y HGGG+CVGSAA S Y A + +++S NYRLAPE P +ED + +L W L+Q G + + ++GDSAG N+A VA +L Sbjct: 85 FNNVPVRVYVPKRKSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLRQDVLEKYGVDPE---------RVGVSGDSAGGNLAAAVAQQL 201
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 278 QSTKLPLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVA 601 +ST +++FHGGGFC+G +HEF T+ + G ++SV+YR+APE P P A +D + WL + + S G S S I L+GDSAG +A VA Sbjct: 154 KSTDEAAMLFFHGGGFCIGDI--DTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEH-SQSLGASP---------SRIVLSGDSAGGCLAALVA 249
BLAST of FC878593 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11 Identity = 54/195 (27.69%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 293 PLLVYFHGGGFCVGSAAWSCYHEFLATLAKKAGCIIMSVNYRLAPENPLPAAYEDGFTSLMWLKQQATSSCGGSVDWLSRQCNFSSIFLAGDSAGANIAHNVALRLGNSNNKVATLKPLTFKGTILIQPFFGGEARTNSEK---YLAQPPRSALSLAASDTYWRLALPRGSNRDHPWSNPMSKGSTELEQYCGLL 868 P ++FHGGG+ +G+ + + F + ++A C++++V+YRLAPE+P PA +DG+ +L++ C + D L N + I + G SAG NIA ++ ++ S A PL + +L+ P A + K P+ L A Y R LP + +P ++P + + C L Sbjct: 101 PCFLWFHGGGWVLGNI--NTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLY--------CYENADTLG--INPNKIAVGGSSAGGNIAAVLSHKVAAS---PANFPPLVLQ--LLVVPVCDNTANAKTHKSWELFENTPQ--LPAAKMMWYRRHYLPNEKDWSNPEASPFFYPDSSFKNVCPAL 276 The following BLAST results are available for this feature:
BLAST of FC878593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878593 ID=FC878593; Name=FC878593; organism=Citrus clementina; type=EST; length=895bpback to top |