FC885370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC885370 vs. ExPASy Swiss-Prot
Match: TTC15_HUMAN (Tetratricopeptide repeat protein 15 OS=Homo sapiens GN=TTC15 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 4.650e-24 Identity = 87/291 (29.90%), Postives = 139/291 (47.77%), Query Frame = 2 Query: 104 LQDLATRGSWRTIIDNVSRARS--------QSLLTQPHHHLTYLAYNTLALM-KLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEE--------------SVKSWKKREIFVLNCLIGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEVEFRNLVSRHKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMY 907 L+ L + +WR +D R + LLT L + LAL+ KL F A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR ++ + V K+ L + L E S++ W+ R V+ + L K+Y + + + I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++ +V + A ++L ++ A R + E + D + VA NN A+CL+Y Sbjct: 384 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHK-VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANCLLLMKDYVLAVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI----MVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLY 666
BLAST of FC885370 vs. ExPASy Swiss-Prot
Match: TTC15_MOUSE (Tetratricopeptide repeat protein 15 OS=Mus musculus GN=Ttc15 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.932e-24 Identity = 92/291 (31.62%), Postives = 139/291 (47.77%), Query Frame = 2 Query: 104 LQDLATRGSWRTIIDNVSR---ARSQSLLTQ--PHHHLT---YLAYNTLALM-KLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEE--------------SVKSWKKREIFVLNCLIGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEVEFRNLVSRHKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMY 907 L+ L + +WR +D R A Q P H T L + LAL+ KL F A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR + + V K+ L + L E SV+ W+ R VL + L K+Y + D I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++ +V ++A +YL ++ A + + E + D + VA NN A+CL+Y Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR-VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVLAVDAYLTVIKYYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI----MVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLY 728 The following BLAST results are available for this feature:
BLAST of FC885370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC885370 ID=FC885370; Name=FC885370; organism=Citrus clementina; type=EST; length=917bpback to top |