FC888706

Overview
NameFC888706
Unique NameFC888706
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length882
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC888706 vs. ExPASy Swiss-Prot
Match: ZN207_HUMAN (Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 2 
Query:  167 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 391
            WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
[Close]
BLAST of FC888706 vs. ExPASy Swiss-Prot
Match: ZN207_PONAB (Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.496e-29
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 2 
Query:  167 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 391
            WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
The following BLAST results are available for this feature:
BLAST of FC888706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZN207_HUMAN2.018e-2970.67Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 ... [more]
ZN207_PONAB4.496e-2970.67Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA23BD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA23BD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888706 ID=FC888706; Name=FC888706; organism=Citrus clementina; type=EST; length=882bp
AGAAACTGAGCAGAGAACGAGAGAGGGGAGAAACAGTAGGAAACCCTAAT
AAATCAATCGAGCGAGAACGAGAGTGATTTTGATAATTTTTTTTTTAAAG
GCAAATAGAGAGAAACAGGGAAGGGCAAAGATGGGAAAGAAGAAGAAGAG
AGTATCGTCGAAGGTTTGGTGCTATTACTGCGACAGGGAATTCGATGACG
AAAAGATTTTAGTACAACATCAGAAAGCTAAGCACTTCAAGTGCCACGTG
TGCCACAAGAAGCTCTCCACCGCCGGCGGCATGGCCATTCACGTCCTTCA
GGTTCACAAAGAGAATGTCACCAAAGTACCTAATGCAAAACCAGGTCGAG
AATCGACTGACATTGAAATTTATGGAATGCAAGGAATACCACCTGATGTC
TTAGCTGCTCATTATGGAGAAGAAGAAGAAGAAGTTCCATCTAAAATGGC
CAAAGTGGATACTTCTTTCCCACAGCTGGTAGGTGGGGTGGTCCCAGGAC
AATTGGGTGTCAGCTATCCTCCTCAATCAACTTTAGGCATGATGCAGCCA
ATTTATAGTTCTGCAGTTCCCGTGCCTCCTGCTGGTTGGCCAGTGCCTCC
TCGTCCTCAACCCTGGTACCCACAGCATGCAGCAGTTTCAATTCCCCCAC
CCGCTGCTGTGGGTTATGCTCAACAGCCTTTATTTCCTGTGCAAAATGTG
AGGCCCCCTCTGGCATCGTCTACGTCACCTGCACTCCAACCTTCTCCAGT
AGTTCCTCCTGGAATGCCCTCGTCTACACCTCCTGTTACCGTATCCCAAC
CCTTGTTTCCTGTGGTGAATAACAATACGACTAGTCAAAAGTCCCTATTT
TCGGCTCCCAATCCCTCAACAAGTATTGCACT
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