FC888990

Overview
NameFC888990
Unique NameFC888990
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length896
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMTA_ARATH (Protein-S-isoprenylcysteine O-methyltransferase A OS=Arabidopsis thaliana GN=ICMTA PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 7.516e-80
Identity = 135/196 (68.88%), Postives = 165/196 (84.18%), Query Frame = 3
Query:  267 MTEMFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFV 854
            MTE+FS T+ RQLSQM  ++ FFH+SEYILAI  HG+ +VTL SLLI+K+Y LAML S++EY+ EI+LF G K  WW+SN GL+M+I GEIIRK+AI+TAGRSFTH+IK+ +EEHH L+THGVY  +RHPSYCGFLIWSVGTQ+MLCNP+S + FA VVW FFA+RIPYEEYFL +FFG++Y EYA  V SGVPFV
Sbjct:    1 MTEIFSDTSIRQLSQMLLSLIFFHISEYILAITIHGASNVTLSSLLITKHYALAMLLSLLEYLTEIILFPGLKQHWWVSNFGLIMIIVGEIIRKAAIITAGRSFTHLIKINYEEHHGLVTHGVYRLMRHPSYCGFLIWSVGTQVMLCNPVSAVAFAVVVWRFFAQRIPYEEYFLNQFFGVQYLEYAESVASGVPFV 196          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMTB_ARATH (Protein-S-isoprenylcysteine O-methyltransferase B OS=Arabidopsis thaliana GN=ICMTB PE=1 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.282e-79
Identity = 140/196 (71.43%), Postives = 163/196 (83.16%), Query Frame = 3
Query:  267 MTEMFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFV 854
            MTE+FS T  RQL+QMF A+ FFH SEYILAIA HG+  VTL SLLISK+Y LAML S++EYI EIV F G K  WWISN GL M+I GEI+RK+AI+TAGRSFTH+IK+  EEHH+L+T GVY  +RHPSY GFLIWSVGTQ+MLCNP+S I FA VVW FFAERIPYEE++LK+FFG +Y EYA+RVPSGVPFV
Sbjct:    1 MTEIFSDTGFRQLTQMFLAIIFFHTSEYILAIAIHGASKVTLSSLLISKHYALAMLISVLEYIAEIVFFPGLKQHWWISNFGLTMIILGEILRKTAIITAGRSFTHLIKIRREEHHKLVTEGVYQIMRHPSYSGFLIWSVGTQVMLCNPISAIAFAVVVWRFFAERIPYEEHYLKQFFGRQYVEYAQRVPSGVPFV 196          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_ORYSJ (Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza sativa subsp. japonica GN=ICMT PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 8.067e-66
Identity = 111/179 (62.01%), Postives = 149/179 (83.24%), Query Frame = 3
Query:  321 AVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            A+  FH SEY+LA AFHG ++VT  SLLISK Y+LAM F+M+E++ E +LF   K++W++S VGLVMVI GE+IRK A++TAGRSFTH+I++ +E+ H+LITHGVY  +RHP Y GFLIW+VGTQ+MLCNPLST+ F  V+W FF++RIPYEE+FL++FFG  YEEYA++V SG+PF++
Sbjct:   13 ALVIFHGSEYVLAAAFHGRRNVTATSLLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFIE 191          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_ORYSI (Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza sativa subsp. indica GN=ICMT PE=3 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 8.067e-66
Identity = 111/179 (62.01%), Postives = 149/179 (83.24%), Query Frame = 3
Query:  321 AVFFFHMSEYILAIAFHGSQSVTLRSLLISKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            A+  FH SEY+LA AFHG ++VT  SLLISK Y+LAM F+M+E++ E +LF   K++W++S VGLVMVI GE+IRK A++TAGRSFTH+I++ +E+ H+LITHGVY  +RHP Y GFLIW+VGTQ+MLCNPLST+ F  V+W FF++RIPYEE+FL++FFG  YEEYA++V SG+PF++
Sbjct:   13 ALVIFHGSEYVLAAAFHGRRNVTATSLLISKQYVLAMSFAMLEHLTEALLFPELKEYWFVSYVGLVMVIIGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLCNPLSTVAFTLVLWRFFSKRIPYEEFFLRQFFGREYEEYAQKVHSGLPFIE 191          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_XENLA (Protein-S-isoprenylcysteine O-methyltransferase OS=Xenopus laevis GN=icmt PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.298e-43
Identity = 81/178 (45.51%), Postives = 120/178 (67.42%), Query Frame = 3
Query:  330 FFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            FFH SEY++  A +  +S+++ S L+  S  Y LA L S +E+ +E  ++   K   W+S +GL+MV+ GE++RK A+LTAG +F HI++    + H L+T GVY + RHPSY G+  WS+GTQ++LCNPL  +G+    W FF+ERI  EE+ L  FFG  Y EY ++VP+G+PF+K
Sbjct:  106 FFHYSEYLVT-AMNNPRSLSIDSFLLNHSLEYTLAALSSWVEFTIETTIYPDLKQITWLSVIGLIMVLFGEVLRKCAMLTAGSNFNHIVQNEKSDSHTLVTSGVYSWFRHPSYVGWFYWSIGTQVLLCNPLCLVGYTLASWRFFSERIEEEEFSLIHFFGENYLEYKKKVPTGLPFIK 282          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_HUMAN (Protein-S-isoprenylcysteine O-methyltransferase OS=Homo sapiens GN=ICMT PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.603e-40
Identity = 80/195 (41.03%), Postives = 121/195 (62.05%), Query Frame = 3
Query:  279 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            FS ++         ++  FH SEY++  A +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MV+ GE +RK+A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF +R   EE  L  FFG  Y EY +RVP+G+PF+K
Sbjct:   85 FSQSSWSHFGWYMCSLSLFHYSEYLVT-AVNNPKSLSLDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIGTQVMLCNPICGVSYALTVWRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIK 278          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_MOUSE (Protein-S-isoprenylcysteine O-methyltransferase OS=Mus musculus GN=Icmt PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.889e-39
Identity = 79/195 (40.51%), Postives = 121/195 (62.05%), Query Frame = 3
Query:  279 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            FS ++         ++  FH SEY++  A +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MV+ GE +RK+A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF +R   EE  L  FFG  Y +Y +RVP+G+PF+K
Sbjct:   84 FSQSSWNHFGWYVCSLSLFHYSEYLVT-AVNNPKSLSLDSFLLNHSLEYTVAALSSWIEFTLENIFWPELKQITWLSATGLLMVVFGECLRKAAMFTAGSNFNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTEEEEISLIHFFGEEYLDYKKRVPTGLPFIK 277          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_RAT (Protein-S-isoprenylcysteine O-methyltransferase (Fragment) OS=Rattus norvegicus GN=Icmt PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.434e-38
Identity = 79/195 (40.51%), Postives = 119/195 (61.03%), Query Frame = 3
Query:  279 FSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDFWWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFVK 857
            FS ++         ++  FH SEY++    +  +S++L S L+  S  Y +A L S +E+ +E + +   K   W+S  GL+MVI GE +RK A+ TAG +F H+++    + H L+T GVY + RHPSY G+  WS+GTQ+MLCNP+  + +A  VW FF +R   EE  L  FFG  Y +Y +RVP+G+PF+K
Sbjct:   33 FSQSSWNHFGWYVCSLSLFHYSEYLVTTV-NNPKSLSLDSFLLNHSLEYTVAALSSWIEFTLENIFWPELKQITWLSAAGLLMVIFGECLRKVAMFTAGSNFNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFFRDRTEEEEISLIHFFGEEYLDYKKRVPTGLPFIK 226          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: ICMT_DICDI (Protein-S-isoprenylcysteine O-methyltransferase OS=Dictyostelium discoideum GN=icmt-1 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.798e-34
Identity = 72/176 (40.91%), Postives = 114/176 (64.77%), Query Frame = 3
Query:  333 FHMSEYILAIAFHGSQSVTLRSLLI--SKNYILAMLFSMMEYIVEIVLFRGSKDF--WWISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVP 848
            FHM EYI    +H  + ++ +S L+  S  + +A+L S +E+ +E   F   K F  WW   VG + ++ G+I+R  A+ TAG +FTH+++    + H L+T+G+Y ++RHPSY G+ +WSV TQ++L NP+S IGF +  W FF++RI  EE +L +FFG  Y++Y + V SG+P
Sbjct:   63 FHMWEYIWVTMYHPDK-LSSKSFLLNHSPQFNMALLISFIEFWIEWYFFPSLKTFSLWW---VGAICMVFGQIVRSVAMDTAGSNFTHLVQEEKRDDHVLVTNGIYQYMRHPSYFGWFVWSVSTQVILMNPISIIGFGWASWSFFSQRIENEEDYLIQFFGKSYKDYKKSVWSGIP 234          
BLAST of FC888990 vs. ExPASy Swiss-Prot
Match: STE14_YEAST (Protein-S-isoprenylcysteine O-methyltransferase OS=Saccharomyces cerevisiae GN=STE14 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.002e-33
Identity = 78/201 (38.81%), Postives = 115/201 (57.21%), Query Frame = 3
Query:  276 MFSYTACRQLSQMFFAVFFFHMSEYILAIAFHGSQSVTLRSLLIS--KNYILAMLFSMMEYIVEIVLFRGSKDFWW------ISNVGLVMVIAGEIIRKSAILTAGRSFTHIIKVCHEEHHELITHGVYGFVRHPSYCGFLIWSVGTQIMLCNPLSTIGFAFVVWHFFAERIPYEEYFLKEFFGIRYEEYARRVPSGVPFV 854
            +F     +  +    A+  FH  EY +  A +    V   S L++  K+Y+ A  F+++E +VE  LF   K F +       + +G ++VI G+  R  A+ TAG SF+HI+K   E  H L+  GVY + RHPSY GF  W++GTQ++L NPLS + F FV+W FF++RI  EE +L EFF   Y EY  +V  G+PF+
Sbjct:   40 LFPQIRFKNFNLFIIALSLFHFLEYYIT-AKYNPLKVHSESFLLNNGKSYMAAHSFAILECLVESFLFPDLKIFSYSLATKLCTVLGCLLVILGQYTRTIAMHTAGHSFSHIVKTKKESDHVLVKTGVYSWSRHPSYLGFFWWAIGTQLLLLNPLSLVIFIFVLWKFFSDRIRVEEKYLIEFFSAEYIEYKNKVGVGIPFI 239          
The following BLAST results are available for this feature:
BLAST of FC888990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ICMTA_ARATH7.516e-8068.88Protein-S-isoprenylcysteine O-methyltransferase A ... [more]
ICMTB_ARATH1.282e-7971.43Protein-S-isoprenylcysteine O-methyltransferase B ... [more]
ICMT_ORYSJ8.067e-6662.01Probable protein-S-isoprenylcysteine O-methyltrans... [more]
ICMT_ORYSI8.067e-6662.01Probable protein-S-isoprenylcysteine O-methyltrans... [more]
ICMT_XENLA3.298e-4345.51Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_HUMAN7.603e-4041.03Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_MOUSE2.889e-3940.51Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
ICMT_RAT1.434e-3840.51Protein-S-isoprenylcysteine O-methyltransferase (F... [more]
ICMT_DICDI2.798e-3440.91Protein-S-isoprenylcysteine O-methyltransferase OS... [more]
STE14_YEAST9.002e-3338.81Protein-S-isoprenylcysteine O-methyltransferase OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA53DE04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53DE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888990 ID=FC888990; Name=FC888990; organism=Citrus clementina; type=EST; length=896bp
ACGAATAAGCTCCTTTGCCTTTGCCCTTTGGTCACCCTCATCTCTCAAAT
TCGCACAAACGGCAAACCCGATAAGTTCGTCGACGTTGCTGCCGCCGCCG
ATCGCTGCTTCCGTCGCGTCCTCGTCGTCCGTCGGCCCTTGCTGTCCTCT
GGTTTGAAGTAGACTCCATGAAGTTTCTTCGCTCATGTCCTTCAACAAAG
CTACCTTTATATAATATCCCGTTGTGGTAAAGCAGTGACAGAAAATTTAT
ACTTTGTTTGATGAAAATGACAGAAATGTTCAGTTACACAGCTTGCAGAC
AGTTATCTCAGATGTTCTTTGCAGTGTTCTTCTTTCACATGTCTGAGTAC
ATTTTAGCAATTGCCTTTCATGGGAGTCAGAGTGTCACTCTTAGGTCACT
TCTTATCAGCAAAAATTATATTTTGGCAATGCTGTTCTCTATGATGGAGT
ACATTGTTGAAATTGTTTTGTTTCGGGGGTCGAAGGATTTTTGGTGGATA
AGCAATGTTGGTCTTGTGATGGTTATAGCTGGGGAAATCATACGGAAAAG
TGCCATTTTAACAGCTGGTCGTTCCTTCACGCATATCATCAAGGTCTGTC
ATGAGGAACATCACGAACTGATTACACATGGAGTGTATGGATTTGTCCGT
CATCCCAGCTATTGTGGTTTCCTCATTTGGTCAGTTGGTACCCAGATAAT
GCTGTGTAATCCCTTGTCCACAATTGGATTTGCATTTGTTGTGTGGCATT
TCTTTGCTGAAAGAATACCATATGAAGAGTATTTCTTGAAAGAGTTTTTT
GGGATACGATATGAGGAATATGCCCGGCGAGTTCCTTCTGGAGTGCCATT
TGTGAAGTGACAATATATAAATGTGGCCTTTGTGAAGTCACTGTTG
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