FC888704

Overview
NameFC888704
Unique NameFC888704
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length842
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: KAP2_ARATH (Adenylyl-sulfate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=AKN2 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.354e-85
Identity = 164/264 (62.12%), Postives = 195/264 (73.86%), Query Frame = 2
Query:   98 VAVGATRPAI-CSPSLAEVDFRTSVKMSGFFN-------------VSRLRSLQPIKALEESATASVVQESAAISGNNLCQ--NSTVAKSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVLIQTG 841
            +A+ A+RP++ CS      D        GF               V+   S  PI A+  SA AS+  +  A+S   L +  N+   K+ NI+WH++S+ + DRQQLLQQKGCV+WITGLSGSGKST+ACALS+AL  RGKLTY LDGDN RHGLNRDL+FKAE R ENIRRIGEVAKLFAD GVICIA LISPYR+DRDACRS+LP+GDF+EVFMDVPL VCE+RDPKGLY LAR GK+KGFTGIDDPYE+P+NCE+VL  TG
Sbjct:    4 LAIRASRPSVFCSIPGLGGDSHRKPPSDGFLKLPASSIPADSRKLVANSTSFHPISAVNVSAQASLTADFPALSETILKEGRNNGKEKAENIVWHESSICRCDRQQLLQQKGCVVWITGLSGSGKSTVACALSKALFERGKLTYTLDGDNVRHGLNRDLTFKAEHRTENIRRIGEVAKLFADVGVICIASLISPYRRDRDACRSLLPDGDFVEVFMDVPLHVCESRDPKGLYKLARAGKIKGFTGIDDPYEAPVNCEVVLKHTG 267          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: KAPS_CATRO (Adenylyl-sulfate kinase, chloroplastic OS=Catharanthus roseus GN=AKN PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.532e-84
Identity = 158/215 (73.49%), Postives = 172/215 (80.00%), Query Frame = 2
Query:  191 VSRLRSLQPIKALEESATASVVQESAAISGNNLCQNSTVAKSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVLIQ 835
            V   R LQP      S + S +       G  + Q +TV  STNILWHK +V+K +RQ+ LQQ+GCVIWITGLSGSGKSTLACALS+ LH +GKLTYILDGDN RHGLN DLSFKAEDR ENIRRIGEVAKLFADAGVICIA LISPYRK  DACRS+LPEGDFIEVFMDVPL+VCEARDPKGLY LAR GK+KGFTGIDDPYE PL  EIVL Q
Sbjct:   73 VDNFRHLQPSDC--NSNSDSSLNNCNGFPGKKILQTTTVGNSTNILWHKCAVEKSERQEPLQQRGCVIWITGLSGSGKSTLACALSRGLHAKGKLTYILDGDNVRHGLNSDLSFKAEDRAENIRRIGEVAKLFADAGVICIASLISPYRKPPDACRSLLPEGDFIEVFMDVPLKVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLKSEIVLHQ 285          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: KAP1_ARATH (Adenylyl-sulfate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=AKN1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 6.544e-83
Identity = 148/181 (81.77%), Postives = 161/181 (88.95%), Query Frame = 2
Query:  299 STVAKSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVLIQTG 841
            STV  STNI WH+ SV+K DRQ+LL QKGCVIW+TGLSGSGKSTLACAL+Q L+ +GKL YILDGDN RHGLNRDLSFKAEDR ENIRR+GEVAKLFADAG+ICIA LISPYR DRDACRS+LPEGDF+EVFMDVPL VCEARDPKGLY LAR GK+KGFTGIDDPYE PLNCEI L + G
Sbjct:   73 STVGNSTNIKWHECSVEKVDRQRLLDQKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIASLISPYRTDRDACRSLLPEGDFVEVFMDVPLSVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPLNCEISLGREG 253          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC_CLOAB (Adenylyl-sulfate kinase OS=Clostridium acetobutylicum GN=cysC PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.773e-55
Identity = 100/173 (57.80%), Postives = 134/173 (77.46%), Query Frame = 2
Query:  311 KSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            KSTN++W +  + +++R+++L+QKG V+W TGLSGSGKST+A AL + L+  G LTY+LDGDN R+GLN DL FK+EDR ENIRR+ EVAKLFADAG+I I   ISP+ +DR+  R +L + DF+EV++D P++VCE RDPKG+Y  AR G++K FTGID PYE P   EI +
Sbjct:    5 KSTNVVWQETKIKRQNREKMLKQKGAVLWFTGLSGSGKSTVASALEKKLYEMGYLTYLLDGDNLRYGLNSDLGFKSEDRTENIRRVSEVAKLFADAGIITITTFISPFIEDRNNARKLLGK-DFVEVYIDCPIEVCEKRDPKGIYKKARNGEIKNFTGIDSPYEKPEKPEITV 176          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC2_BACSU (Probable adenylyl-sulfate kinase OS=Bacillus subtilis GN=yisZ PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 9.848e-55
Identity = 96/170 (56.47%), Postives = 128/170 (75.29%), Query Frame = 2
Query:  320 NILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            NI+WH  ++ K DRQ L   K CV+W TGLSGSGKS LA A+ + L+ +G  +Y+LDGDN RHGLN+DL F+  DR+ENIRRIGEVAKLF D+G + +   ISP+R+DRD  R++ P+G+F E+++  PL VCE RDPKGLY  AR G++K FTGID PYE+PL+ + ++
Sbjct:    6 NIIWHPAAISKSDRQSLNGHKSCVLWFTGLSGSGKSVLANAVDEKLYRKGIQSYVLDGDNIRHGLNKDLGFQTGDRIENIRRIGEVAKLFVDSGQMILTAFISPFREDRDMVRALFPKGEFFEIYVKCPLHVCEQRDPKGLYKKARNGEIKHFTGIDSPYEAPLSPDFII 175          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC_CLOK5 (Adenylyl-sulfate kinase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=cysC PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.194e-54
Identity = 102/173 (58.96%), Postives = 130/173 (75.14%), Query Frame = 2
Query:  311 KSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            KSTNI WH+  VD+  R++LL Q G +IW TGLSGSGKST+A  L   L+  G+LTY+LDGDN RHGLN +L F  EDR+ENIRR  EV KLF D+G+I I+  ISP++ DRD  R +L + DF+EV++D PL+VCE+RDPKG+Y  AR G++K FTG+D PYE P N EIV+
Sbjct:    4 KSTNISWHRALVDREMREKLLGQNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTYLLDGDNVRHGLNSNLGFTKEDRIENIRRTAEVCKLFVDSGIITISTFISPFKDDRDKVRKLLGK-DFVEVYVDCPLEVCESRDPKGIYKKARNGEIKDFTGVDSPYEVPDNPEIVV 175          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC_MARAV (Adenylyl-sulfate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=cysC PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.383e-54
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 2
Query:  317 TNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            +NI+WH + V + +R     QK C++W TGLSGSGKST+A AL  ALH RG  T++LDGDN RHGL  DL F  +DRVENIRR+GEV KLFADAG+I ++  ISP+  DR   R + P G+FIEVFMD PL+ CE+RDPKGLY  AR G++K FTGID PYE P + EI L
Sbjct:    2 SNIVWHDHKVTRAERSANKNQKPCLLWFTGLSGSGKSTIANALDVALHERGYHTFLLDGDNVRHGLCSDLGFSDDDRVENIRRVGEVCKLFADAGLIVMSAFISPFTSDRRMVRKLFPAGEFIEVFMDAPLETCESRDPKGLYKKARAGEIKHFTGIDSPYEVPSHPEIRL 172          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC_LACPL (Adenylyl-sulfate kinase OS=Lactobacillus plantarum GN=cysC PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.572e-52
Identity = 103/175 (58.86%), Postives = 127/175 (72.57%), Query Frame = 2
Query:  305 VAKSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            + KS NI WH++ V K +RQ L   K  V+W TGLSGSGKST+A A+ +AL  +   +Y+LDGDN R GLN++L F AEDR ENIRRIGEVAKLF DAGVI +   ISPYR DRD  R+ L   +FIEVF+D PL+VCE RD K LY  AR G++ GFTGID PYE+P++ EI +
Sbjct:    1 MVKSDNITWHQSQVSKAERQALNHHKSVVLWFTGLSGSGKSTIANAVEKALFDQQVGSYVLDGDNMRFGLNKNLGFSAEDREENIRRIGEVAKLFVDAGVITLTAFISPYRADRDKVRANLEVDEFIEVFVDTPLEVCEQRDVKQLYAKARRGEITGFTGIDAPYEAPIDPEITI 175          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC_YERPE (Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.053e-52
Identity = 102/176 (57.95%), Postives = 126/176 (71.59%), Query Frame = 2
Query:  302 TVAKSTNILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            T +   NI+WH +++ ++DR+Q    +G V+W TGLSGSGKSTLA AL QAL  RG  TY+LDGDN RHGL RDL F   DR ENIRR+GEVAKL  DAG++ +   ISP+R +R   + ML  G FIEVF+D PL +CEARDPKGLY  AR G++K FTGID  YESP + +I L
Sbjct:   13 TRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLTAFISPHRAERKMVQDMLASGQFIEVFVDTPLAICEARDPKGLYKKARAGELKNFTGIDSVYESPASPDIHL 188          
BLAST of FC888704 vs. ExPASy Swiss-Prot
Match: CYSC1_BACHD (Probable adenylyl-sulfate kinase OS=Bacillus halodurans GN=BH1489 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.053e-52
Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 2
Query:  320 NILWHKNSVDKRDRQQLLQQKGCVIWITGLSGSGKSTLACALSQALHWRGKLTYILDGDNCRHGLNRDLSFKAEDRVENIRRIGEVAKLFADAGVICIACLISPYRKDRDACRSMLPEGDFIEVFMDVPLQVCEARDPKGLY*LAREGKVKGFTGIDDPYESPLNCEIVL 829
            +I+WH+ SV K +RQ+  + K CV+W TGLSGSGKSTLA AL + L   G  +Y+LDGDN RHGLN  L F  EDR ENIRRIGEVAKLF DAGV+     ISP+R+DRD  R +L +G+FIEV++  PL+ CE RDPKGLY  AR G +  FTGI  PYE P+N E+++
Sbjct:    8 HIVWHEASVSKEERQKRNRLKSCVVWFTGLSGSGKSTLANALDRKLFEEGIHSYVLDGDNIRHGLNAGLGFSEEDRKENIRRIGEVAKLFVDAGVVTSTAFISPFREDRDNVRGILDDGEFIEVYVRCPLETCEKRDPKGLYKKARSGDIPEFTGISSPYEEPVNPELII 177          
The following BLAST results are available for this feature:
BLAST of FC888704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
KAP2_ARATH5.354e-8562.12Adenylyl-sulfate kinase 2, chloroplastic OS=Arabid... [more]
KAPS_CATRO4.532e-8473.49Adenylyl-sulfate kinase, chloroplastic OS=Catharan... [more]
KAP1_ARATH6.544e-8381.77Adenylyl-sulfate kinase 1, chloroplastic OS=Arabid... [more]
CYSC_CLOAB5.773e-5557.80Adenylyl-sulfate kinase OS=Clostridium acetobutyli... [more]
CYSC2_BACSU9.848e-5556.47Probable adenylyl-sulfate kinase OS=Bacillus subti... [more]
CYSC_CLOK52.194e-5458.96Adenylyl-sulfate kinase OS=Clostridium kluyveri (s... [more]
CYSC_MARAV6.383e-5459.65Adenylyl-sulfate kinase OS=Marinobacter aquaeolei ... [more]
CYSC_LACPL1.572e-5258.86Adenylyl-sulfate kinase OS=Lactobacillus plantarum... [more]
CYSC_YERPE2.053e-5257.95Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC... [more]
CYSC1_BACHD2.053e-5258.24Probable adenylyl-sulfate kinase OS=Bacillus halod... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA57AH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA57AH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC888704 ID=FC888704; Name=FC888704; organism=Citrus clementina; type=EST; length=842bp
CCAATCTTCTCTCTGTTCCTTGATTGACTGTAAATTCCGTTTCATTTGAG
CTGGTGACAAGCATATTTTGGTTAAGATTATGGAGAAGGTTGTGGCAGTA
GCTGTGGGAGCGACTCGGCCGGCAATTTGCAGCCCTTCGCTGGCCGAGGT
TGACTTTCGAACGTCGGTTAAGATGTCAGGGTTTTTCAACGTGTCGAGGT
TGAGGTCTTTGCAGCCGATTAAAGCATTGGAGGAGTCGGCAACTGCTTCG
GTGGTTCAAGAATCTGCTGCCATTTCTGGTAACAATCTCTGCCAGAATTC
TACTGTTGCAAAGTCGACAAACATCTTGTGGCACAAAAATTCAGTGGATA
AACGTGACAGGCAACAGTTACTTCAGCAAAAAGGCTGCGTCATATGGATT
ACTGGTCTTAGTGGTTCAGGAAAAAGCACTCTGGCGTGTGCTTTGAGTCA
GGCCTTGCACTGGAGAGGAAAGTTGACCTACATTCTTGATGGGGACAACT
GCCGGCATGGACTGAACCGTGATCTAAGTTTTAAGGCAGAAGATCGTGTG
GAAAACATACGCAGGATTGGAGAGGTAGCAAAGCTTTTTGCTGATGCTGG
TGTTATTTGCATTGCTTGTTTGATCTCTCCTTACAGAAAAGATCGAGATG
CCTGCCGTTCAATGTTGCCGGAAGGAGATTTCATTGAGGTGTTCATGGAT
GTGCCACTTCAAGTGTGTGAGGCAAGGGACCCAAAGGGCCTTTACTAGCT
TGCACGAGAAGGGAAGGTCAAGGGTTTTACTGGGATTGATGATCCATATG
AATCACCATTAAACTGTGAGATAGTACTAATACAGACGGGAG
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