FC891084

Overview
NameFC891084
Unique NameFC891084
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length901
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 8.927e-81
Identity = 152/214 (71.03%), Postives = 184/214 (85.98%), Query Frame = 3
Query:  258 KPPTYILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTNGTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKTSQIDTIITVLLTELRLAHLASTRLAHNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETFL 899
            +PP++IL+N++LTA+P++ILA+VGPSGAGKSTLLDIL+++TSPT+G+ILLNS PI PSS+RK+S+YVPQHD+  P LTV ETF F+A LL+P  S +   +T LL+EL L HL+ TRLA  LSGGERRRVSIGLSLLHDP  LLLDEPTSGLDS+SAF+V+  LKSI+ SR RTVILSIHQPSFKILS IDR+LLLSKG+VV+HG L SLE FL
Sbjct:   39 EPPSFILRNITLTAHPTEILAVVGPSGAGKSTLLDILASKTSPTSGSILLNSIPINPSSYRKISSYVPQHDSFFPLLTVSETFSFAACLLLPNPSIVSETVTSLLSELNLTHLSHTRLAQGLSGGERRRVSIGLSLLHDPCFLLLDEPTSGLDSKSAFDVIHILKSIAVSRQRTVILSIHQPSFKILSIIDRLLLLSKGTVVYHGRLDSLEGFL 252          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 9.870e-80
Identity = 153/213 (71.83%), Postives = 181/213 (84.98%), Query Frame = 3
Query:  264 PTYILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTNGTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKT-SQIDTIITVLLTELRLAHLASTRLAHNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETFL 899
            P++IL+N++LT++PSQILAI+GPSGAGKSTLLDIL+ARTSPT+G+ILLNS  I PSS+RK+S+YVPQHD   P LTV ETF FSA LL+PK  S++ +++  LL EL L HLA TRL   LSGGERRRVSIGLSLLHDP VLLLDEPTSGLDS+SAF+V+Q LKSI+ SR R VILSIHQPSFKILS IDR+LLLSKG++V+HG L  LE FL
Sbjct:   27 PSFILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPTSGSILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFSASLLLPKNLSKVSSVVASLLKELNLTHLAHTRLGQGLSGGERRRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDRVLLLSKGTIVYHGRLDLLEAFL 239          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.840e-48
Identity = 102/215 (47.44%), Postives = 148/215 (68.84%), Query Frame = 3
Query:  270 YILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTNGTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARL-LVPKTSQIDTIITVLLTELRLAHLASTRLAHN----LSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETFL 899
            ++LK V+  A P +ILAIVGPSGAGKS+LL+IL+AR  P  G++ +N  P+  ++F+K+S YV Q D   P LTV ET LFSA+L L     ++ + +  L+ EL L  +A+ R+  +    +SGGERRRVSIG+ ++HDP VL+LDEPTSGLDS SA  ++  LK ++ +R RT+IL+IHQP F+I+   + +LLL+ GS +  G++  L  +L
Sbjct:   61 HVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQTGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRLKLPADELRSRVKSLVHELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHMAETRGRTIILTIHQPGFRIVKQFNSVLLLANGSTLKQGSVDQLGVYL 275          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.627e-48
Identity = 109/220 (49.55%), Postives = 148/220 (67.27%), Query Frame = 3
Query:  252 SLKPPTYILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTS--PTNGTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKTSQIDTIITV--LLTELRLAHLASTRLAHN----LSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASL 887
            S K    ILK+VS  A  ++I AI GPSGAGK+TLL+IL+ + S    +G +L+N  P+    +R++S +VPQ DA  P LTV ET  +SA LL  KT + D    V  L+ EL L H+A +R+       +SGGERRRVSIG+ L+HDP V+L+DEPTSGLDS SA  V+  LK ++  + +T++L+IHQP F+IL  IDRI+LLS G VV +G++ SL
Sbjct:   43 SEKEEKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSA-LLRLKTKRKDAAAKVKRLIQELGLEHVADSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIKQGKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGSVYSL 261          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.031e-41
Identity = 95/221 (42.99%), Postives = 143/221 (64.71%), Query Frame = 3
Query:  267 TYILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTS-----PTNGTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKTS--QIDTIITVLLTELRLAHLASTRLAHN------LSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLE 890
            T IL +VSL A  S+ILA+VGPSG GKSTLL I+S R +     P++  ++ N      +  R+L  +VPQ D  +P LTV ET ++SA+  +  ++  + +  +  LL++L L  +  + +         +SGGER+RVSI + ++ DP +LLLDEPTSGLDSR++  V++ L +++ S+ RTV+ SIHQPS++IL  I   L+LS+GSV+H G+L  LE
Sbjct:   64 TPILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAVLMNNRKITDYNQLRRLCGFVPQDDDLLPLLTVKETLMYSAKFSLRDSTAKEREERVESLLSDLGLVLVQDSFVGEGDEEDRGVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVELLATMAKSKQRTVLFSIHQPSYRILDYISDYLILSRGSVIHLGSLEHLE 284          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.012e-40
Identity = 95/217 (43.78%), Postives = 139/217 (64.06%), Query Frame = 3
Query:  273 ILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTN--GTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKT---SQIDTIITVLLTELRLAHLASTRLA----HNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETF 896
            +L N+S      +ILA++G SG+GKSTL+D L+ R +  +  GT+ LN   ++    + +SAYV Q D   P LTV ET +F+A   +P++   S+    +  L+ +L + + A T +       +SGGERRRVSIG+ ++HDP VL LDEPTSGLDS SAF V++ LK I+ S    +I+SIHQPS ++LS +DR++ LS+G  V  G+ ASL +F
Sbjct:  107 LLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAES-GSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSPASLPSF 322          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.304e-39
Identity = 93/217 (42.86%), Postives = 138/217 (63.59%), Query Frame = 3
Query:  273 ILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTN--GTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKT---SQIDTIITVLLTELRLAHLASTRLA----HNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETF 896
            +L N+S      +I+A++G SG+GKSTL+D L+ R +  +  GT+ LN   ++    + +SAYV Q D   P LTV ET +F+A   +P++   S+    +  L+ +L + + A T +       +SGGERRRVSIG+ ++HDP +L LDEPTSGLDS SAF V++ LK I+ S    VI+SIHQPS ++L  +DR++ LS+G  V+ G+ ASL  F
Sbjct:  109 LLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQS-GSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRF 324          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.453e-39
Identity = 98/218 (44.95%), Postives = 140/218 (64.22%), Query Frame = 3
Query:  273 ILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTN--GTILLNSSPIKPSSFRK-LSAYVPQHDACIPSLTVYETFLFSARLLVPKT---SQIDTIITVLLTELRLAHLASTRLA----HNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETF 896
            +L +VS  A    ILA++G SGAGKSTL+D L+ R +  +  G++ LN   +  S   K +SAYV Q D   P LTV ET +F++   +P++   S+    +  L+ +L L + A+T +       +SGGERRRVSIG+ ++HDP VL LDEPTSGLDS +AF V+Q LK I+ S    VI+SIHQPS +I+  +DR+++LS+G  V +G+ ASL  F
Sbjct:   99 LLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQS-GSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGF 315          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.104e-38
Identity = 95/217 (43.78%), Postives = 136/217 (62.67%), Query Frame = 3
Query:  273 ILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTN--GTILLNSSPIKPSSFRKLSAYVPQHDACIPSLTVYETFLFSARLLVPKT---SQIDTIITVLLTELRLAHLASTRLA----HNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETF 896
            +L  ++  A   +ILAI+G SGAGKSTL+D L+ + +  +  GT+ LN   ++    R +SAYV Q D   P LTV ET +F+A   +P++   S+    +  L+ +L L  + +T +       +SGGERRRVSIG  ++HDP VL LDEPTSGLDS SAF V+Q LK I+ S    VI+SIHQPS +I+  +DR+++LS G +V   + A+L  F
Sbjct:   51 LLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIARS-GSIVIMSIHQPSGRIMEFLDRVIVLSSGQIVFSDSPATLPLF 266          
BLAST of FC891084 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.883e-38
Identity = 96/219 (43.84%), Postives = 141/219 (64.38%), Query Frame = 3
Query:  273 ILKNVSLTAYPSQILAIVGPSGAGKSTLLDILSARTSPTN--GTILLNSSPIKPSSFRK-LSAYVPQHDACIPSLTVYETFLFSARLLVP----KTSQIDTIITVLLTELRLAHLASTRLA----HNLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSRSAFNVMQTLKSISASRHRTVILSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLETF 896
            +L +++  A   +ILA++G SGAGKSTL+D L+ R +  +  GT+ LN   +  S   K +SAYV Q D   P LTV ET +F++   +P    K+ +++ + T L+ +L L + A T +       +SGGERRRVSIG+ ++HDP +L LDEPTSGLDS +AF V+Q LK I+ S    VI+SIHQPS +I+  +DR+++LS G  V +G+  SL +F
Sbjct:   91 LLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVET-LIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQS-GSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPVSLPSF 307          
The following BLAST results are available for this feature:
BLAST of FC891084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB8G_ARATH8.927e-8171.03ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB4G_ARATH9.870e-8071.83ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB5G_ARATH5.840e-4847.44ABC transporter G family member 5 OS=Arabidopsis t... [more]
AB10G_ARATH7.627e-4849.55ABC transporter G family member 10 OS=Arabidopsis ... [more]
AB23G_ARATH9.031e-4142.99ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB16G_ARATH2.012e-4043.78ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB1G_ARATH1.304e-3942.86ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB19G_ARATH8.453e-3944.95ABC transporter G family member 19 OS=Arabidopsis ... [more]
AB17G_ARATH1.104e-3843.78ABC transporter G family member 17 OS=Arabidopsis ... [more]
AB18G_ARATH1.883e-3843.84ABC transporter G family member 18 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA37CA06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA37CA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC891084 ID=FC891084; Name=FC891084; organism=Citrus clementina; type=EST; length=901bp
ACCATTACAGTCCTCTAATAGCCAATAGCCTCATGGAGACTTTATATTCC
CAACACATCTGTTCATCCTACTCTTTCCAATTATCATCCCTTCAACTTTC
CTCTTGTCTCATGGAAGAAGAATTACCACCACCATTGCCGGCACCGTCGC
CTCCGCCGCCACCGCTTAAAACCTACAAGTTGACGGGTTCTTCAATCTCA
TACATCAAATCTAATAACAGCATTATACCATCCTTCATTTTCGAAGTTTG
CTCATTAAAGCCACCGACTTACATCCTCAAGAACGTGTCTCTCACAGCCT
ATCCATCCCAAATCCTTGCAATTGTTGGCCCAAGCGGGGCAGGCAAATCA
ACCCTCCTCGACATTTTATCGGCCCGAACATCCCCCACAAATGGCACCAT
CCTCCTCAATTCATCCCCCATCAAGCCTTCATCATTCCGCAAGCTCTCAG
CTTATGTCCCTCAGCATGATGCATGCATCCCTTCTCTCACTGTCTACGAA
ACTTTTCTCTTCTCAGCTCGCCTTTTGGTCCCCAAAACATCCCAAATAGA
CACAATTATCACGGTCCTTCTCACTGAGCTCAGGCTAGCACACTTGGCCA
GCACAAGGCTCGCTCATAATCTATCAGGCGGTGAGCGTAGACGTGTCTCC
ATAGGCTTAAGTCTCCTTCACGACCCTGCCGTGTTGCTTCTCGACGAACC
CACTTCGGGCCTCGACAGTCGCTCTGCTTTCAACGTTATGCAGACCCTCA
AATCCATCTCTGCCTCGCGTCACCGCACTGTGATCTTATCCATCCATCAA
CCCAGCTTCAAAATCCTCTCCACCATTGATAGAATCCTTCTGCTATCAAA
AGGGTCTGTTGTTCATCATGGCACACTTGCTTCACTTGAAACGTTTTTGC
T
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