FC912164

Overview
NameFC912164
Unique NameFC912164
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length917
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_RAT (Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.003e-51
Identity = 104/199 (52.26%), Postives = 127/199 (63.82%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            ++ F++ L QL V++ K                       LPE +NSPY  + FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GICYD+RF ELA IY  RG  L+ YPGAFNMTTGP HWELLQRA
Sbjct:    1 MSTFRLALIQLQVSSIKSDNITRACSLVREAAKQGANIVSLPECFNSPYGTNYFPEYAEKIPG-----ESTKKLSEVAKENSIYLIGGSIPEEDDGKLYNTCAVFGPDGNLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYARRGCQLLVYPGAFNMTTGPAHWELLQRA 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_HUMAN (Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.942e-51
Identity = 102/199 (51.26%), Postives = 127/199 (63.82%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            +T F++ L QL +++ K                       LPE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++ +  DT   R+G+GICYD+RF ELA IY  RG  L+ YPGAFN+TTGP HWELLQR+
Sbjct:    1 MTSFRLALIQLQISSIKSDNVTRACSFIREAATQGAKIVSLPECFNSPYGAKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRS 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_BOVIN (Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.298e-50
Identity = 102/195 (52.31%), Postives = 127/195 (65.13%), Query Frame = 1
Query:  325 FKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQR 909
            F++ L QL V++ K                       LPE +NSPY    FP YAE I   GD   ST  LSEVA+   + ++GGSIPE+   +LYNTC VFG DG L+ KHRK+HLFDID+PGKITF ES++L+ G++ ++ DT   R+G+GICYDIRF ELA IY  RG  L+ YPGAFN+TTGP HWELLQR
Sbjct:    4 FRLALIQLQVSSIKSENLTRACGLIREASKQGAQIVSLPECFNSPYGTKYFPDYAEKIP--GD---STQKLSEVAKECSMYVIGGSIPEKDAGKLYNTCAVFGPDGTLLVKHRKLHLFDIDVPGKITFQESETLSPGDSFSLFDTPYCRVGLGICYDIRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQR 193          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_MOUSE (Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.696e-50
Identity = 102/199 (51.26%), Postives = 126/199 (63.32%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            ++ F++ L QL V++ K                       LPE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKITF ESK+L+ G++ +  DT   ++G+GICYD+RF ELA IY  RG  L+ YPGAFN+TTGP HWELLQRA
Sbjct:    1 MSTFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPG-----ESTQKLSEVAKESSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRA 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2A_XENLA (Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.416e-50
Identity = 101/199 (50.75%), Postives = 125/199 (62.81%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            + KFK+ L Q  V+  K                       LPE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GICYDIRF ELA IY  +G  L+ YPGAFNMTTGP HWELLQRA
Sbjct:    1 MAKFKLSLVQFLVSPVKSDNLNRACKLIKEAAQKGAQIVALPECFNSPYGTTYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDCGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDIRFAELAQIYANKGCQLLVYPGAFNMTTGPAHWELLQRA 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: YAUB_SCHPO (UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces pombe GN=SPAC26A3.11 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49
Identity = 102/196 (52.04%), Postives = 125/196 (63.78%), Query Frame = 1
Query:  325 FKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            F++GL QL+ T DK                       LPEI+NSPY    F  YAE I+   ++SPS   LS +A+  K  + GGSIPER   +LYNT  VF   GKLIA HRKIHLFDIDIPG ++F ES SL+ G+  T+VDT+ G+ G+GICYDIRF ELAMI    G  ++ YPGAFN++TGPLHWELL RA
Sbjct:   44 FRIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFNQYAEPIE---ESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGDAMTMVDTEYGKFGLGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTGPLHWELLARA 236          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2B_XENLA (Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.455e-49
Identity = 98/199 (49.25%), Postives = 124/199 (62.31%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            + KF++ L Q  V+  K                       LPE +NSPY    FP YAE I        ST +LS+VA+   I ++GGSIPE    + YNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ DT   ++G+GICYD+RF ELA IY  +G  L+ YPGAFNMTTGP HWELLQRA
Sbjct:    1 MAKFRLSLVQFLVSPVKSDNLNKACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTELLSQVAKECGIYLIGGSIPEEDSGKFYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFDTPYCKVGVGICYDMRFAELAQIYANKGCQLLVYPGAFNMTTGPAHWELLQRA 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_XENTR (Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.125e-49
Identity = 98/199 (49.25%), Postives = 124/199 (62.31%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRA 912
            + KF++ L Q  V+  K                       LPE +NSPY    FP YAE I        ST  LS+VA+   I ++GGSIPE    +LYNTC VFG DG L+ KHRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GICYDIRF ELA +Y  +G  L+ YPGAFNMTTGP HWELLQRA
Sbjct:    1 MAKFRLSLVQFLVSPVKSENLNRACKLIKEAAQKGAQIVALPECFNSPYGTKYFPEYAEKIPG-----ESTERLSQVAKECGIYLIGGSIPEEDSGKLYNTCAVFGPDGTLLVKHRKIHLFDIDVPGKIRFQESETLSPGDSFSVFETPYCKVGVGICYDIRFAELAQLYSKKGCQLLVYPGAFNMTTGPAHWELLQRA 194          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_PONAB (Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.536e-48
Identity = 100/198 (50.51%), Postives = 123/198 (62.12%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQR 909
            +  F++ L QL +++                         LPE +NSPY    FP YAE I        ST  LSEVA+   I ++GGSIPE    +LYNTC VFG DG L+AK+RKIHLFDID+PGKITF ESK+L+ G++    DT   R+G+GICYD+RF ELA IY  RG  L+ YPGAFN+TTGP HWELLQR
Sbjct:    1 MASFRLALIQLQISSINSDNVTRACSFIREAATQGAKIVSLPECFNSPYGTKYFPEYAEKIPG-----ESTQKLSEVAKECSIYLIGGSIPEEDAGKLYNTCAVFGPDGTLLAKYRKIHLFDIDVPGKITFQESKTLSPGDSFCTFDT-YCRVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQR 192          
BLAST of FC912164 vs. ExPASy Swiss-Prot
Match: NIT2_DANRE (Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.618e-48
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 1
Query:  316 VTKFKVGLCQLSVTADKXXXXXXXXXXXXXXXXXXXXXXXLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQR 909
            ++KF++ + QL V+  K                       LPE +NSPY    F  YAE I        ST +LSE A+   I +VGGSIPE  G +LYNTC VFG DG L+  HRKIHLFDID+PGKI F ES++L+ G++ ++ +T   ++G+GICYDIRF ELA IY  +G  L+ YPGAFNMTTGP HWELLQR
Sbjct:    1 MSKFRLAVVQLHVSKIKADNLGRAQTLVKEAAGQGAKVVVLPECFNSPYGTGFFKEYAEKIPG-----ESTQVLSETAKKCGIYLVGGSIPEEDGGKLYNTCSVFGPDGTLLVTHRKIHLFDIDVPGKIRFQESETLSPGKSLSMFETPYCKVGVGICYDIRFAELAQIYAKKGCQLLVYPGAFNMTTGPAHWELLQR 193          
The following BLAST results are available for this feature:
BLAST of FC912164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NIT2_RAT2.003e-5152.26Omega-amidase NIT2 OS=Rattus norvegicus GN=Nit2 PE... [more]
NIT2_HUMAN9.942e-5151.26Omega-amidase NIT2 OS=Homo sapiens GN=NIT2 PE=1 SV... [more]
NIT2_BOVIN1.298e-5052.31Omega-amidase NIT2 OS=Bos taurus GN=NIT2 PE=2 SV=1[more]
NIT2_MOUSE1.696e-5051.26Omega-amidase NIT2 OS=Mus musculus GN=Nit2 PE=1 SV... [more]
NIT2A_XENLA8.416e-5050.75Omega-amidase NIT2-A OS=Xenopus laevis GN=nit2a PE... [more]
YAUB_SCHPO5.455e-4952.04UPF0012 hydrolase C26A3.11 OS=Schizosaccharomyces ... [more]
NIT2B_XENLA5.455e-4949.25Omega-amidase NIT2-B OS=Xenopus laevis GN=nit2b PE... [more]
NIT2_XENTR7.125e-4949.25Omega-amidase NIT2 OS=Xenopus tropicalis GN=nit2 P... [more]
NIT2_PONAB3.536e-4850.51Omega-amidase NIT2 OS=Pongo abelii GN=NIT2 PE=3 SV... [more]
NIT2_DANRE4.618e-4849.49Omega-amidase NIT2 OS=Danio rerio GN=nit2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA99BE04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA99BE04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC912164 ID=FC912164; Name=FC912164; organism=Citrus clementina; type=EST; length=917bp
CCAAAATCGAGTGTTCTGATGCCGTGGAATTGAGCTTTGAATAGAGTATA
AAATAACAGGGAAGAAAGTGAAATGAAGTCAGCAGTAGCAATCACTTCTA
AGATTCATCTAAATCTCAATCTCAATCTCAGACGCAATCACTTGTACTCC
CCTCTCTCTCGTTCCATATTTCGAGGAAAGGCTAAACCCGTCTTCCAATC
TCCTCCTCTCATCCGCACACACTCGTCAAATCCAAATCCAAATCCAATCA
TGGCTTCCTCTTTCAAGCCCGAACAAGCCAGGGCCCCACCCGCCCTTCCC
TTGCCCACTCCCCCCGTCACCAAGTTTAAGGTTGGGCTTTGCCAATTGTC
AGTAACGGCTGACAAAGAAAGGAACATCGCTCATGCTCGTAGAGCCATTG
AGGAGGCGGCTGAGAAAGGCGCCAAGCTCATTATTTTGCCTGAGATTTGG
AACAGTCCCTATTCGAATGACAGCTTCCCAGTTTATGCCGAAGACATTGA
TGCTGGTGGTGATGCATCTCCTTCCACCGCCATGCTTTCTGAAGTTGCTC
GTCTTCTGAAGATCACTATAGTTGGCGGCTCTATTCCCGAACGTTCTGGG
GATCGATTGTACAATACTTGCTGCGTCTTTGGTTCTGATGGAAAACTGAT
AGCTAAGCACCGGAAGATACACCTTTTTGATATTGACATTCCCGGGAAGA
TTACCTTTATAGAATCAAAGTCCCTTACAGCAGGGGAGACACCAACCATT
GTGGACACAGATGTTGGGCGTATTGGAATAGGTATTTGTTATGATATTCG
GTTTCAGGAACTGGCAATGATATATGGAGCAAGAGGTGCTCACTTGATAT
GCTATCCTGGGGCATTTAACATGACTACTGGGCCATTGCATTGGGAGTTA
TTGCAGAGGGCANGGGC
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